RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 HSPA4P34932 840 aa21.62■■□□□ 1.05
VRK3-225ENST00000601912 ADD2P35612 726 aa21.62■■□□□ 1.05
VRK3-225ENST00000601912 ANAPC15P60006 121 aa21.62■■□□□ 1.05
VRK3-225ENST00000601912 DPP8Q6V1X1 898 aaPredicted RBP21.62■■□□□ 1.05
VRK3-225ENST00000601912 SEC62Q99442 399 aaKnown RBP21.62■■□□□ 1.05
VRK3-225ENST00000601912 KIF2CQ99661 725 aa21.62■■□□□ 1.05
VRK3-225ENST00000601912 PTH1RQ03431 593 aa21.61■■□□□ 1.05
VRK3-225ENST00000601912 BECN1Q14457 450 aa21.61■■□□□ 1.05
VRK3-225ENST00000601912 MAP4K1Q92918 833 aa21.61■■□□□ 1.05
VRK3-225ENST00000601912 DAXXQ9UER7 740 aaPredicted RBP21.61■■□□□ 1.05
VRK3-225ENST00000601912 PDE6AP16499 860 aa21.6■■□□□ 1.05
VRK3-225ENST00000601912 SLFNL1Q499Z3 407 aa21.6■■□□□ 1.05
VRK3-225ENST00000601912 ABCF2Q9UG63 623 aa21.6■■□□□ 1.05
VRK3-225ENST00000601912 MYH7P12883 1935 aa21.6■■□□□ 1.05
VRK3-225ENST00000601912 RABEP1Q15276 862 aa21.6■■□□□ 1.05
VRK3-225ENST00000601912 CCDC129Q6ZRS4 1044 aa21.6■■□□□ 1.05
VRK3-225ENST00000601912 TDRD7Q8NHU6 1098 aaKnown RBP21.6■■□□□ 1.05
VRK3-225ENST00000601912 OSBP2Q969R2 916 aa21.6■■□□□ 1.05
VRK3-225ENST00000601912 GPR101Q96P66 508 aaPredicted RBP21.6■■□□□ 1.05
VRK3-225ENST00000601912 MAST3O60307 1309 aa21.59■■□□□ 1.05
VRK3-225ENST00000601912 CC2D2BQ6DHV5 1058 aa21.59■■□□□ 1.05
VRK3-225ENST00000601912 WWC3Q9ULE0 1092 aa21.59■■□□□ 1.05
VRK3-225ENST00000601912 ZNF532Q9HCE3 1301 aa21.59■■□□□ 1.05
VRK3-225ENST00000601912 CHAF1AQ13111 956 aaPredicted RBP21.58■■□□□ 1.05
VRK3-225ENST00000601912 MAGEB6Q8N7X4 407 aa21.58■■□□□ 1.05
VRK3-225ENST00000601912 TTLL6Q8N841 843 aa21.58■■□□□ 1.05
VRK3-225ENST00000601912 EYA3Q99504 573 aa21.58■■□□□ 1.05
VRK3-225ENST00000601912 ZC3H12CQ9C0D7 883 aaKnown RBP21.58■■□□□ 1.05
VRK3-225ENST00000601912 CD209Q9NNX6 404 aa21.58■■□□□ 1.05
VRK3-225ENST00000601912 RAI14Q9P0K7 980 aa21.58■■□□□ 1.05
VRK3-225ENST00000601912 RBM8AQ9Y5S9 174 aaKnown RBP21.58■■□□□ 1.05
VRK3-225ENST00000601912 COL1A1P02452 1464 aaPredicted RBP21.58■■□□□ 1.04
VRK3-225ENST00000601912 PSDA5PKW4 1024 aaPredicted RBP21.57■■□□□ 1.04
VRK3-225ENST00000601912 M0R2C6 588 aa21.57■■□□□ 1.04
VRK3-225ENST00000601912 TGFB2P61812 414 aa21.57■■□□□ 1.04
VRK3-225ENST00000601912 RNF20Q5VTR2 975 aa21.57■■□□□ 1.04
VRK3-225ENST00000601912 OLFM4Q6UX06 510 aa21.57■■□□□ 1.04
VRK3-225ENST00000601912 ZGPATQ8N5A5 531 aaKnown RBP21.57■■□□□ 1.04
VRK3-225ENST00000601912 WDR66Q8TBY9 1149 aa21.57■■□□□ 1.04
VRK3-225ENST00000601912 LTBP1Q14766 1721 aa21.57■■□□□ 1.04
VRK3-225ENST00000601912 DSCC1Q9BVC3 393 aa21.56■■□□□ 1.04
VRK3-225ENST00000601912 PUS7LQ9H0K6 701 aaKnown RBP21.56■■□□□ 1.04
VRK3-225ENST00000601912 U3KPZ7 1027 aaPredicted RBP21.56■■□□□ 1.04
VRK3-225ENST00000601912 DOCK2Q92608 1830 aa21.56■■□□□ 1.04
VRK3-225ENST00000601912 CACNA1SQ13698 1873 aa21.56■■□□□ 1.04
VRK3-225ENST00000601912 SLX4Q8IY92 1834 aa21.56■■□□□ 1.04
VRK3-225ENST00000601912 MYH13Q9UKX3 1938 aa21.56■■□□□ 1.04
VRK3-225ENST00000601912 A0A0G2JLW4 131 aa21.56■■□□□ 1.04
VRK3-225ENST00000601912 TCRBV5S4A2TA0A5A2 114 aa21.56■■□□□ 1.04
VRK3-225ENST00000601912 IGSF3O75054 1194 aa21.56■■□□□ 1.04
VRK3-225ENST00000601912 IL1R1P14778 569 aa21.56■■□□□ 1.04
VRK3-225ENST00000601912 DPEP1P16444 411 aa21.56■■□□□ 1.04
VRK3-225ENST00000601912 ZKSCAN1P17029 563 aaPredicted RBP21.56■■□□□ 1.04
VRK3-225ENST00000601912 NECTIN1Q15223 517 aa21.56■■□□□ 1.04
VRK3-225ENST00000601912 GRIPAP1Q4V328 841 aa21.56■■□□□ 1.04
VRK3-225ENST00000601912 SPTY2D1Q68D10 685 aaPredicted RBP21.56■■□□□ 1.04
VRK3-225ENST00000601912 ERICH6Q7L0X2 663 aa21.56■■□□□ 1.04
VRK3-225ENST00000601912 IL17RAQ96F46 866 aa21.56■■□□□ 1.04
VRK3-225ENST00000601912 COA1Q9GZY4 146 aa21.56■■□□□ 1.04
VRK3-225ENST00000601912 PALD1Q9ULE6 856 aa21.56■■□□□ 1.04
VRK3-225ENST00000601912 TMED8Q6PL24 325 aaPredicted RBP21.55■■□□□ 1.04
VRK3-225ENST00000601912 C7orf43Q8WVR3 580 aa21.55■■□□□ 1.04
VRK3-225ENST00000601912 ZNF219Q9P2Y4 722 aaPredicted RBP21.55■■□□□ 1.04
VRK3-225ENST00000601912 MYO5AQ9Y4I1 1855 aaKnown RBP21.55■■□□□ 1.04
VRK3-225ENST00000601912 KIF13BQ9NQT8 1826 aa21.54■■□□□ 1.04
VRK3-225ENST00000601912 SALL1Q9NSC2 1324 aa21.54■■□□□ 1.04
VRK3-225ENST00000601912 RIMBP2O15034 1052 aa21.54■■□□□ 1.04
VRK3-225ENST00000601912 GPAA1O43292 621 aa21.54■■□□□ 1.04
VRK3-225ENST00000601912 G3V3G9 751 aa21.53■■□□□ 1.04
VRK3-225ENST00000601912 HSPD1P10809 573 aaKnown RBP21.53■■□□□ 1.04
VRK3-225ENST00000601912 DCAF8Q5TAQ9 597 aa21.53■■□□□ 1.04
VRK3-225ENST00000601912 CREB3L3Q68CJ9 461 aa21.53■■□□□ 1.04
VRK3-225ENST00000601912 IL27Q8NEV9 243 aa21.53■■□□□ 1.04
VRK3-225ENST00000601912 SNX21Q969T3 373 aa21.53■■□□□ 1.04
VRK3-225ENST00000601912 AIDAQ96BJ3 306 aa21.53■■□□□ 1.04
VRK3-225ENST00000601912 SNX14Q9Y5W7 946 aa21.53■■□□□ 1.04
VRK3-225ENST00000601912 DLEC1Q9Y238 1755 aa21.53■■□□□ 1.04
VRK3-225ENST00000601912 KCNA3P22001 575 aa21.53■■□□□ 1.04
VRK3-225ENST00000601912 CYP7A1P22680 504 aa21.53■■□□□ 1.04
VRK3-225ENST00000601912 HSCBQ8IWL3 235 aa21.53■■□□□ 1.04
VRK3-225ENST00000601912 KCNB2Q92953 911 aa21.53■■□□□ 1.04
VRK3-225ENST00000601912 ST18O60284 1047 aa21.52■■□□□ 1.04
VRK3-225ENST00000601912 VPS53Q5VIR6 699 aa21.52■■□□□ 1.04
VRK3-225ENST00000601912 NAA16Q6N069 864 aaPredicted RBP21.52■■□□□ 1.04
VRK3-225ENST00000601912 SUPT20HQ8NEM7 779 aa21.52■■□□□ 1.04
VRK3-225ENST00000601912 RTFDC1Q9BY42 306 aaPredicted RBP21.52■■□□□ 1.04
VRK3-225ENST00000601912 PIM2Q9P1W9 311 aa21.52■■□□□ 1.04
VRK3-225ENST00000601912 DUOX1Q9NRD9 1551 aa21.52■■□□□ 1.04
VRK3-225ENST00000601912 SLC27A2O14975 620 aa21.51■■□□□ 1.03
VRK3-225ENST00000601912 C21orf2O43822 256 aa21.51■■□□□ 1.03
VRK3-225ENST00000601912 SGIP1Q9BQI5 828 aa21.51■■□□□ 1.03
VRK3-225ENST00000601912 TBC1D2Q9BYX2 928 aa21.51■■□□□ 1.03
VRK3-225ENST00000601912 PPP1R1BQ9UD71 204 aaPredicted RBP21.51■■□□□ 1.03
VRK3-225ENST00000601912 CTNNA3Q9UI47 895 aa21.51■■□□□ 1.03
VRK3-225ENST00000601912 JAG2Q9Y219 1238 aa21.51■■□□□ 1.03
VRK3-225ENST00000601912 CD2APQ9Y5K6 639 aa21.51■■□□□ 1.03
VRK3-225ENST00000601912 CCDC93Q567U6 631 aa21.5■■□□□ 1.03
VRK3-225ENST00000601912 RASEFQ8IZ41 740 aa21.5■■□□□ 1.03
VRK3-225ENST00000601912 RTKN2Q8IZC4 609 aa21.5■■□□□ 1.03
VRK3-225ENST00000601912 TBC1D22AQ8WUA7 517 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms