RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-223ENST00000600523 KIF1BPQ96EK5 621 aa16■□□□□ 0.15
SRRM1-223ENST00000600523 ZBTB47Q9UFB7 747 aaPredicted RBP16■□□□□ 0.15
SRRM1-223ENST00000600523 EXOC6BQ9Y2D4 811 aa16■□□□□ 0.15
SRRM1-223ENST00000600523 ZNF609O15014 1411 aa16■□□□□ 0.15
SRRM1-223ENST00000600523 FAM205AQ6ZU69 1335 aa15.99■□□□□ 0.15
SRRM1-223ENST00000600523 MFSD14BQ5SR56 506 aa15.99■□□□□ 0.15
SRRM1-223ENST00000600523 CHADLQ6NUI6 762 aa15.99■□□□□ 0.15
SRRM1-223ENST00000600523 CLASRPQ8N2M8 674 aaKnown RBP15.99■□□□□ 0.15
SRRM1-223ENST00000600523 WDR66Q8TBY9 1149 aa15.99■□□□□ 0.15
SRRM1-223ENST00000600523 XAGE2Q96GT9 111 aa15.99■□□□□ 0.15
SRRM1-223ENST00000600523 DENND2AQ9ULE3 1009 aa15.99■□□□□ 0.15
SRRM1-223ENST00000600523 IQSEC3Q9UPP2 1182 aaPredicted RBP15.99■□□□□ 0.15
SRRM1-223ENST00000600523 APBB1O00213 710 aa15.98■□□□□ 0.15
SRRM1-223ENST00000600523 C1QTNF8P60827 252 aa15.98■□□□□ 0.15
SRRM1-223ENST00000600523 TNNI3KQ59H18 835 aa15.98■□□□□ 0.15
SRRM1-223ENST00000600523 CCDC102BQ68D86 513 aa15.98■□□□□ 0.15
SRRM1-223ENST00000600523 KIAA0825Q8IV33 1275 aa15.98■□□□□ 0.15
SRRM1-223ENST00000600523 ZGPATQ8N5A5 531 aaKnown RBP15.98■□□□□ 0.15
SRRM1-223ENST00000600523 FPGT-TNNI3KV9GXZ4 949 aa15.98■□□□□ 0.15
SRRM1-223ENST00000600523 CENPBP07199 599 aaPredicted RBP15.97■□□□□ 0.15
SRRM1-223ENST00000600523 UQCRFS1P1P0C7P4 283 aa15.97■□□□□ 0.15
SRRM1-223ENST00000600523 ZNF280AP59817 542 aaPredicted RBP15.97■□□□□ 0.15
SRRM1-223ENST00000600523 KIF4BQ2VIQ3 1234 aa15.97■□□□□ 0.15
SRRM1-223ENST00000600523 TTC39AQ5SRH9 613 aa15.97■□□□□ 0.15
SRRM1-223ENST00000600523 RBM26Q5T8P6 1007 aaKnown RBP15.97■□□□□ 0.15
SRRM1-223ENST00000600523 SIRT2Q8IXJ6 389 aa15.97■□□□□ 0.15
SRRM1-223ENST00000600523 RHPN1Q8TCX5 695 aa15.97■□□□□ 0.15
SRRM1-223ENST00000600523 ZC3H15Q8WU90 426 aaKnown RBP15.97■□□□□ 0.15
SRRM1-223ENST00000600523 GMLQ99445 158 aa15.97■□□□□ 0.15
SRRM1-223ENST00000600523 MYOZ2Q9NPC6 264 aa15.97■□□□□ 0.15
SRRM1-223ENST00000600523 JAG2Q9Y219 1238 aa15.97■□□□□ 0.15
SRRM1-223ENST00000600523 MAST3O60307 1309 aa15.96■□□□□ 0.15
SRRM1-223ENST00000600523 IFIT2P09913 472 aaKnown RBP15.96■□□□□ 0.15
SRRM1-223ENST00000600523 ADORA1P30542 326 aa15.96■□□□□ 0.15
SRRM1-223ENST00000600523 TBC1D10BQ4KMP7 808 aaPredicted RBP15.96■□□□□ 0.15
SRRM1-223ENST00000600523 LRRCC1Q9C099 1032 aa15.96■□□□□ 0.15
SRRM1-223ENST00000600523 SUGT1Q9Y2Z0 365 aa15.96■□□□□ 0.15
SRRM1-223ENST00000600523 SCN9AQ15858 1988 aa15.96■□□□□ 0.15
SRRM1-223ENST00000600523 PSME4Q14997 1843 aa15.96■□□□□ 0.14
SRRM1-223ENST00000600523 F8W031 263 aaPredicted RBP15.95■□□□□ 0.14
SRRM1-223ENST00000600523 MYO1BO43795 1136 aa15.95■□□□□ 0.14
SRRM1-223ENST00000600523 PHKA1P46020 1223 aa15.95■□□□□ 0.14
SRRM1-223ENST00000600523 RBM5P52756 815 aaKnown RBP eCLIP15.95■□□□□ 0.14
SRRM1-223ENST00000600523 SPTY2D1Q68D10 685 aaPredicted RBP15.95■□□□□ 0.14
SRRM1-223ENST00000600523 SAMD7Q7Z3H4 446 aa15.95■□□□□ 0.14
SRRM1-223ENST00000600523 AACSQ86V21 672 aa15.95■□□□□ 0.14
SRRM1-223ENST00000600523 DCPSQ96C86 337 aaKnown RBP15.95■□□□□ 0.14
SRRM1-223ENST00000600523 MXD3Q9BW11 206 aa15.95■□□□□ 0.14
SRRM1-223ENST00000600523 BCL11AQ9H165 835 aa15.95■□□□□ 0.14
SRRM1-223ENST00000600523 TTF2Q9UNY4 1162 aaKnown RBP15.95■□□□□ 0.14
SRRM1-223ENST00000600523 ZBTB22O15209 634 aa15.94■□□□□ 0.14
SRRM1-223ENST00000600523 DLGAP5Q15398 846 aa15.94■□□□□ 0.14
SRRM1-223ENST00000600523 RWDD1Q9H446 243 aaPredicted RBP15.94■□□□□ 0.14
SRRM1-223ENST00000600523 PDS5AQ29RF7 1337 aaKnown RBP15.94■□□□□ 0.14
SRRM1-223ENST00000600523 CNTROBQ8N137 903 aa15.93■□□□□ 0.14
SRRM1-223ENST00000600523 TRPM4Q8TD43 1214 aa15.93■□□□□ 0.14
SRRM1-223ENST00000600523 DCTPP1Q9H773 170 aa15.93■□□□□ 0.14
SRRM1-223ENST00000600523 IL1RAPL2Q9NP60 686 aa15.93■□□□□ 0.14
SRRM1-223ENST00000600523 PCDHB15Q9Y5E8 787 aa15.93■□□□□ 0.14
SRRM1-223ENST00000600523 ARAP2Q8WZ64 1704 aa15.92■□□□□ 0.14
SRRM1-223ENST00000600523 SHTN1A0MZ66 631 aa15.92■□□□□ 0.14
SRRM1-223ENST00000600523 LDHBP07195 334 aaKnown RBP15.92■□□□□ 0.14
SRRM1-223ENST00000600523 POTEIP0CG38 1075 aa15.92■□□□□ 0.14
SRRM1-223ENST00000600523 POTEJP0CG39 1038 aa15.92■□□□□ 0.14
SRRM1-223ENST00000600523 SCARF1Q14162 830 aa15.92■□□□□ 0.14
SRRM1-223ENST00000600523 MAP1SQ66K74 1059 aaPredicted RBP15.92■□□□□ 0.14
SRRM1-223ENST00000600523 SULF1Q8IWU6 871 aa15.92■□□□□ 0.14
SRRM1-223ENST00000600523 SLF2Q8IX21 1173 aa15.92■□□□□ 0.14
SRRM1-223ENST00000600523 CERS5Q8N5B7 392 aa15.92■□□□□ 0.14
SRRM1-223ENST00000600523 SPATA5Q8NB90 893 aa15.92■□□□□ 0.14
SRRM1-223ENST00000600523 EXOC6Q8TAG9 804 aa15.92■□□□□ 0.14
SRRM1-223ENST00000600523 TEKT1Q969V4 418 aa15.92■□□□□ 0.14
SRRM1-223ENST00000600523 EAF2Q96CJ1 260 aaPredicted RBP15.92■□□□□ 0.14
SRRM1-223ENST00000600523 GPATCH3Q96I76 525 aa15.92■□□□□ 0.14
SRRM1-223ENST00000600523 DBNDD2Q9BQY9 259 aa15.92■□□□□ 0.14
SRRM1-223ENST00000600523 CCDC8Q9H0W5 538 aaPredicted RBP15.92■□□□□ 0.14
SRRM1-223ENST00000600523 SERPINA10Q9UK55 444 aa15.92■□□□□ 0.14
SRRM1-223ENST00000600523 ARID4AP29374 1257 aaPredicted RBP15.91■□□□□ 0.14
SRRM1-223ENST00000600523 HDLBPQ00341 1268 aaKnown RBP15.91■□□□□ 0.14
SRRM1-223ENST00000600523 HDAC1Q13547 482 aaPredicted RBP15.91■□□□□ 0.14
SRRM1-223ENST00000600523 RASGRF1Q13972 1273 aa15.91■□□□□ 0.14
SRRM1-223ENST00000600523 CDC37L1Q7L3B6 337 aa15.91■□□□□ 0.14
SRRM1-223ENST00000600523 GCC1Q96CN9 775 aa15.91■□□□□ 0.14
SRRM1-223ENST00000600523 ZNF512BQ96KM6 892 aaPredicted RBP15.91■□□□□ 0.14
SRRM1-223ENST00000600523 ABCF2Q9UG63 623 aa15.91■□□□□ 0.14
SRRM1-223ENST00000600523 DBNLQ9UJU6 430 aaKnown RBP15.91■□□□□ 0.14
SRRM1-223ENST00000600523 SALL1Q9NSC2 1324 aa15.91■□□□□ 0.14
SRRM1-223ENST00000600523 NEFLP07196 543 aa15.9■□□□□ 0.14
SRRM1-223ENST00000600523 CFAP100Q494V2 611 aa15.9■□□□□ 0.14
SRRM1-223ENST00000600523 DZIP1Q86YF9 867 aaKnown RBP15.9■□□□□ 0.14
SRRM1-223ENST00000600523 MTMR14Q8NCE2 650 aa15.9■□□□□ 0.14
SRRM1-223ENST00000600523 PGAP2Q9UHJ9 254 aa15.9■□□□□ 0.14
SRRM1-223ENST00000600523 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.9■□□□□ 0.14
SRRM1-223ENST00000600523 HIRAP54198 1017 aaPredicted RBP15.89■□□□□ 0.13
SRRM1-223ENST00000600523 IRX6P78412 446 aaPredicted RBP15.89■□□□□ 0.13
SRRM1-223ENST00000600523 ERICH6Q7L0X2 663 aa15.89■□□□□ 0.13
SRRM1-223ENST00000600523 KRT26Q7Z3Y9 468 aa15.89■□□□□ 0.13
SRRM1-223ENST00000600523 APOBEC3FQ8IUX4 373 aaKnown RBP15.89■□□□□ 0.13
SRRM1-223ENST00000600523 MRIQ9BWK5 157 aa15.89■□□□□ 0.13
SRRM1-223ENST00000600523 GGA3Q9NZ52 723 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms