RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 HMG20BQ9P0W2 317 aa24.5■■□□□ 1.51
SHKBP1-222ENST00000600320 PSME4Q14997 1843 aa24.49■■□□□ 1.51
SHKBP1-222ENST00000600320 ZBTB22O15209 634 aa24.49■■□□□ 1.51
SHKBP1-222ENST00000600320 EIF6P56537 245 aaKnown RBP24.49■■□□□ 1.51
SHKBP1-222ENST00000600320 CHAF1AQ13111 956 aaPredicted RBP24.49■■□□□ 1.51
SHKBP1-222ENST00000600320 FBXW7Q969H0 707 aa24.49■■□□□ 1.51
SHKBP1-222ENST00000600320 MXD3Q9BW11 206 aa24.49■■□□□ 1.51
SHKBP1-222ENST00000600320 ECHDC1Q9NTX5 307 aa24.49■■□□□ 1.51
SHKBP1-222ENST00000600320 FAM205AQ6ZU69 1335 aa24.49■■□□□ 1.51
SHKBP1-222ENST00000600320 USP17L3A6NCW0 530 aa24.48■■□□□ 1.51
SHKBP1-222ENST00000600320 USP17L4A6NCW7 530 aa24.48■■□□□ 1.51
SHKBP1-222ENST00000600320 PSMD14O00487 310 aa24.48■■□□□ 1.51
SHKBP1-222ENST00000600320 SEMA3EO15041 775 aa24.48■■□□□ 1.51
SHKBP1-222ENST00000600320 FRAT2O75474 233 aaPredicted RBP24.48■■□□□ 1.51
SHKBP1-222ENST00000600320 MX1P20591 662 aa24.48■■□□□ 1.51
SHKBP1-222ENST00000600320 CIAPIN1Q6FI81 312 aa24.48■■□□□ 1.51
SHKBP1-222ENST00000600320 USP17L1Q7RTZ2 530 aa24.48■■□□□ 1.51
SHKBP1-222ENST00000600320 SNRKQ9NRH2 765 aa24.48■■□□□ 1.51
SHKBP1-222ENST00000600320 AKAP11Q9UKA4 1901 aa24.48■■□□□ 1.51
SHKBP1-222ENST00000600320 DENND2AQ9ULE3 1009 aa24.48■■□□□ 1.51
SHKBP1-222ENST00000600320 MYH13Q9UKX3 1938 aa24.47■■□□□ 1.51
SHKBP1-222ENST00000600320 DACT2Q5SW24 774 aa24.47■■□□□ 1.51
SHKBP1-222ENST00000600320 TTLL5Q6EMB2 1281 aa24.47■■□□□ 1.51
SHKBP1-222ENST00000600320 PLEKHM2Q8IWE5 1019 aa24.47■■□□□ 1.51
SHKBP1-222ENST00000600320 NDUFB9Q9Y6M9 179 aa24.47■■□□□ 1.51
SHKBP1-222ENST00000600320 ZC3H4Q9UPT8 1303 aaKnown RBP24.46■■□□□ 1.51
SHKBP1-222ENST00000600320 ATP5JP18859 108 aa24.46■■□□□ 1.51
SHKBP1-222ENST00000600320 PDE1AP54750 535 aa24.46■■□□□ 1.51
SHKBP1-222ENST00000600320 STRIP1Q5VSL9 837 aa24.46■■□□□ 1.51
SHKBP1-222ENST00000600320 SPATA5Q8NB90 893 aa24.46■■□□□ 1.51
SHKBP1-222ENST00000600320 PI4K2BQ8TCG2 481 aa24.46■■□□□ 1.51
SHKBP1-222ENST00000600320 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.46■■□□□ 1.51
SHKBP1-222ENST00000600320 BOLA2Q9H3K6 86 aa24.46■■□□□ 1.51
SHKBP1-222ENST00000600320 STAP2Q9UGK3 403 aa24.46■■□□□ 1.51
SHKBP1-222ENST00000600320 TTC41PQ6P2S7 1318 aa24.45■■□□□ 1.5
SHKBP1-222ENST00000600320 VIL1P09327 827 aaKnown RBP24.45■■□□□ 1.5
SHKBP1-222ENST00000600320 ZAP70P43403 619 aa24.45■■□□□ 1.5
SHKBP1-222ENST00000600320 CERS5Q8N5B7 392 aa24.45■■□□□ 1.5
SHKBP1-222ENST00000600320 GJA3Q9Y6H8 435 aa24.45■■□□□ 1.5
SHKBP1-222ENST00000600320 DDNO94850 711 aaPredicted RBP24.44■■□□□ 1.5
SHKBP1-222ENST00000600320 GRIK5Q16478 980 aa24.44■■□□□ 1.5
SHKBP1-222ENST00000600320 GPATCH3Q96I76 525 aa24.44■■□□□ 1.5
SHKBP1-222ENST00000600320 ZBTB12Q9Y330 459 aaPredicted RBP24.44■■□□□ 1.5
SHKBP1-222ENST00000600320 PDS5AQ29RF7 1337 aaKnown RBP24.43■■□□□ 1.5
SHKBP1-222ENST00000600320 TNIP1Q15025 636 aa24.43■■□□□ 1.5
SHKBP1-222ENST00000600320 RSBN1LQ6PCB5 846 aaPredicted RBP24.43■■□□□ 1.5
SHKBP1-222ENST00000600320 MFSD14BQ5SR56 506 aa24.42■■□□□ 1.5
SHKBP1-222ENST00000600320 TBC1D9Q6ZT07 1266 aa24.42■■□□□ 1.5
SHKBP1-222ENST00000600320 WDR66Q8TBY9 1149 aa24.42■■□□□ 1.5
SHKBP1-222ENST00000600320 EDC3Q96F86 508 aaKnown RBP24.42■■□□□ 1.5
SHKBP1-222ENST00000600320 HAUS7Q99871 368 aa24.42■■□□□ 1.5
SHKBP1-222ENST00000600320 CYP2E1P05181 493 aaPredicted RBP24.41■■□□□ 1.5
SHKBP1-222ENST00000600320 GPC2Q8N158 579 aa24.41■■□□□ 1.5
SHKBP1-222ENST00000600320 GMLQ99445 158 aa24.41■■□□□ 1.5
SHKBP1-222ENST00000600320 DNAJC2Q99543 621 aaKnown RBP24.41■■□□□ 1.5
SHKBP1-222ENST00000600320 OSBPL3Q9H4L5 887 aa24.41■■□□□ 1.5
SHKBP1-222ENST00000600320 ANTXR1Q9H6X2 564 aa24.41■■□□□ 1.5
SHKBP1-222ENST00000600320 SALL1Q9NSC2 1324 aa24.4■■□□□ 1.5
SHKBP1-222ENST00000600320 GLRX3O76003 335 aaKnown RBP24.4■■□□□ 1.5
SHKBP1-222ENST00000600320 GMPSP49915 693 aaPredicted RBP24.4■■□□□ 1.5
SHKBP1-222ENST00000600320 FKBP1AP62942 108 aaKnown RBP24.4■■□□□ 1.5
SHKBP1-222ENST00000600320 PIH1D3Q9NQM4 214 aaKnown RBP24.4■■□□□ 1.5
SHKBP1-222ENST00000600320 AOX1Q06278 1338 aa24.39■■□□□ 1.5
SHKBP1-222ENST00000600320 GLTPD2A6NH11 291 aa24.39■■□□□ 1.49
SHKBP1-222ENST00000600320 ERC2O15083 957 aa24.39■■□□□ 1.49
SHKBP1-222ENST00000600320 TBC1D22AQ8WUA7 517 aa24.39■■□□□ 1.49
SHKBP1-222ENST00000600320 SHTN1A0MZ66 631 aa24.38■■□□□ 1.49
SHKBP1-222ENST00000600320 MAP4K4O95819 1239 aaPredicted RBP24.38■■□□□ 1.49
SHKBP1-222ENST00000600320 PRDX5P30044 214 aa24.38■■□□□ 1.49
SHKBP1-222ENST00000600320 DPY19L2Q6NUT2 758 aa24.38■■□□□ 1.49
SHKBP1-222ENST00000600320 F8W031 263 aaPredicted RBP24.37■■□□□ 1.49
SHKBP1-222ENST00000600320 GOLIM4O00461 696 aa24.37■■□□□ 1.49
SHKBP1-222ENST00000600320 SCNN1DP51172 638 aa24.37■■□□□ 1.49
SHKBP1-222ENST00000600320 KIAA0825Q8IV33 1275 aa24.37■■□□□ 1.49
SHKBP1-222ENST00000600320 ZNF784Q8NCA9 323 aaPredicted RBP24.37■■□□□ 1.49
SHKBP1-222ENST00000600320 AGBL3Q8NEM8 1001 aa24.37■■□□□ 1.49
SHKBP1-222ENST00000600320 ABCF2Q9UG63 623 aa24.37■■□□□ 1.49
SHKBP1-222ENST00000600320 MYO3BQ8WXR4 1341 aa24.36■■□□□ 1.49
SHKBP1-222ENST00000600320 RGS3P49796 1198 aa24.36■■□□□ 1.49
SHKBP1-222ENST00000600320 PAG1Q9NWQ8 432 aa24.36■■□□□ 1.49
SHKBP1-222ENST00000600320 MYO5AQ9Y4I1 1855 aaKnown RBP24.36■■□□□ 1.49
SHKBP1-222ENST00000600320 RPS12P25398 132 aaKnown RBP24.35■■□□□ 1.49
SHKBP1-222ENST00000600320 ZGPATQ8N5A5 531 aaKnown RBP24.34■■□□□ 1.49
SHKBP1-222ENST00000600320 DPF2Q92785 391 aa24.34■■□□□ 1.49
SHKBP1-222ENST00000600320 L3MBTL3Q96JM7 780 aaPredicted RBP24.34■■□□□ 1.49
SHKBP1-222ENST00000600320 TTF2Q9UNY4 1162 aaKnown RBP24.34■■□□□ 1.49
SHKBP1-222ENST00000600320 LDHBP07195 334 aaKnown RBP24.33■■□□□ 1.49
SHKBP1-222ENST00000600320 GSPT1P15170 499 aaKnown RBP24.33■■□□□ 1.49
SHKBP1-222ENST00000600320 TTC22Q5TAA0 569 aa24.33■■□□□ 1.49
SHKBP1-222ENST00000600320 ERICH6Q7L0X2 663 aa24.33■■□□□ 1.49
SHKBP1-222ENST00000600320 ZNF384Q8TF68 577 aa24.33■■□□□ 1.49
SHKBP1-222ENST00000600320 GPRC5DQ9NZD1 345 aa24.33■■□□□ 1.49
SHKBP1-222ENST00000600320 CNOT7Q9UIV1 285 aaKnown RBP24.33■■□□□ 1.49
SHKBP1-222ENST00000600320 SUGT1Q9Y2Z0 365 aa24.33■■□□□ 1.49
SHKBP1-222ENST00000600320 DOCK2Q92608 1830 aa24.33■■□□□ 1.48
SHKBP1-222ENST00000600320 WDR90Q96KV7 1748 aa24.32■■□□□ 1.48
SHKBP1-222ENST00000600320 POTECB2RU33 542 aa24.32■■□□□ 1.48
SHKBP1-222ENST00000600320 EPS15P42566 896 aa24.32■■□□□ 1.48
SHKBP1-222ENST00000600320 MICALL2Q8IY33 904 aa24.32■■□□□ 1.48
SHKBP1-222ENST00000600320 ZNF526Q8TF50 670 aaPredicted RBP24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms