RNA–Protein interactions for RNA: ENST00000599227.5

ZNF544-213, Transcript of zinc finger protein 544, humanhuman

TSL 1 (best) BASIC

Gene ZNF544, Length 3,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544-213ENST00000599227 PTPN14Q15678 1187 aa13.05□□□□□ -0.32
ZNF544-213ENST00000599227 KBTBD3Q8NAB2 608 aa13.05□□□□□ -0.32
ZNF544-213ENST00000599227 NSUN7Q8NE18 718 aaKnown RBP13.05□□□□□ -0.32
ZNF544-213ENST00000599227 COBLO75128 1261 aa13.05□□□□□ -0.32
ZNF544-213ENST00000599227 AKAP17AQ02040 695 aaKnown RBP13.05□□□□□ -0.32
ZNF544-213ENST00000599227 TRIM29Q14134 588 aa13.05□□□□□ -0.32
ZNF544-213ENST00000599227 CEP135Q66GS9 1140 aa13.05□□□□□ -0.32
ZNF544-213ENST00000599227 SEC31BQ9NQW1 1179 aa13.05□□□□□ -0.32
ZNF544-213ENST00000599227 IRS4O14654 1257 aaPredicted RBP13.04□□□□□ -0.32
ZNF544-213ENST00000599227 HSPD1P10809 573 aaKnown RBP13.04□□□□□ -0.32
ZNF544-213ENST00000599227 CEP57L1Q8IYX8 460 aa13.04□□□□□ -0.32
ZNF544-213ENST00000599227 KLHL34Q8N239 644 aa13.04□□□□□ -0.32
ZNF544-213ENST00000599227 ZNF396Q96N95 335 aaPredicted RBP13.04□□□□□ -0.32
ZNF544-213ENST00000599227 CLIC4Q9Y696 253 aa13.04□□□□□ -0.32
ZNF544-213ENST00000599227 AKAP12Q02952 1782 aa13.04□□□□□ -0.32
ZNF544-213ENST00000599227 EPB41L2O43491 1005 aaKnown RBP13.04□□□□□ -0.32
ZNF544-213ENST00000599227 TPM3P06753 285 aa13.04□□□□□ -0.32
ZNF544-213ENST00000599227 ITGA6P23229 1130 aa13.04□□□□□ -0.32
ZNF544-213ENST00000599227 CTDSPL2Q05D32 466 aa13.04□□□□□ -0.32
ZNF544-213ENST00000599227 XAGE2Q96GT9 111 aa13.04□□□□□ -0.32
ZNF544-213ENST00000599227 NIP7Q9Y221 180 aaKnown RBP eCLIP13.04□□□□□ -0.32
ZNF544-213ENST00000599227 ZBTB1Q9Y2K1 713 aa13.04□□□□□ -0.32
ZNF544-213ENST00000599227 ZNF609O15014 1411 aa13.04□□□□□ -0.32
ZNF544-213ENST00000599227 AGLP35573 1532 aa13.04□□□□□ -0.32
ZNF544-213ENST00000599227 NBPF26B4DH59 902 aa13.04□□□□□ -0.32
ZNF544-213ENST00000599227 F8W031 263 aaPredicted RBP13.04□□□□□ -0.32
ZNF544-213ENST00000599227 CDK11BP21127 795 aaKnown RBP13.04□□□□□ -0.32
ZNF544-213ENST00000599227 STX1AQ16623 288 aa13.04□□□□□ -0.32
ZNF544-213ENST00000599227 NBPF14Q5TI25 921 aa13.04□□□□□ -0.32
ZNF544-213ENST00000599227 NBPF10Q6P3W6 841 aaKnown RBP13.04□□□□□ -0.32
ZNF544-213ENST00000599227 DZIP3Q86Y13 1208 aaKnown RBP13.04□□□□□ -0.32
ZNF544-213ENST00000599227 NBPF15Q8N660 670 aa13.04□□□□□ -0.32
ZNF544-213ENST00000599227 GREM2Q9H772 168 aa13.04□□□□□ -0.32
ZNF544-213ENST00000599227 IFNKQ9P0W0 207 aa13.04□□□□□ -0.32
ZNF544-213ENST00000599227 BAZ2BQ9UIF8 2168 aaKnown RBP13.04□□□□□ -0.32
ZNF544-213ENST00000599227 SETD1AO15047 1707 aaKnown RBP13.03□□□□□ -0.32
ZNF544-213ENST00000599227 M0R2C6 588 aa13.03□□□□□ -0.32
ZNF544-213ENST00000599227 SCARF1Q14162 830 aa13.03□□□□□ -0.32
ZNF544-213ENST00000599227 STAMQ92783 540 aa13.03□□□□□ -0.32
ZNF544-213ENST00000599227 TFCP2L1Q9NZI6 479 aa13.03□□□□□ -0.32
ZNF544-213ENST00000599227 USP42Q9H9J4 1324 aaKnown RBP13.03□□□□□ -0.32
ZNF544-213ENST00000599227 OSBP2Q969R2 916 aa13.03□□□□□ -0.32
ZNF544-213ENST00000599227 EEF2KMTQ96G04 330 aa13.03□□□□□ -0.32
ZNF544-213ENST00000599227 NAPBQ9H115 298 aa13.03□□□□□ -0.32
ZNF544-213ENST00000599227 IFIT3O14879 490 aaKnown RBP13.02□□□□□ -0.32
ZNF544-213ENST00000599227 ERCC3P19447 782 aa13.02□□□□□ -0.32
ZNF544-213ENST00000599227 ADD1P35611 737 aaKnown RBP13.02□□□□□ -0.32
ZNF544-213ENST00000599227 NDUFA8P51970 172 aa13.02□□□□□ -0.32
ZNF544-213ENST00000599227 IMMTQ16891 758 aaKnown RBP13.02□□□□□ -0.32
ZNF544-213ENST00000599227 CPLX3Q8WVH0 158 aa13.02□□□□□ -0.32
ZNF544-213ENST00000599227 SLC26A6Q9BXS9 759 aa13.02□□□□□ -0.32
ZNF544-213ENST00000599227 ARMT1Q9H993 441 aa13.02□□□□□ -0.32
ZNF544-213ENST00000599227 COPRSQ9NQ92 184 aa13.02□□□□□ -0.32
ZNF544-213ENST00000599227 PCDHA7Q9UN72 937 aa13.02□□□□□ -0.32
ZNF544-213ENST00000599227 PRC1O43663 620 aa13.02□□□□□ -0.32
ZNF544-213ENST00000599227 CTDNEP1O95476 244 aa13.02□□□□□ -0.32
ZNF544-213ENST00000599227 MEX3CQ5U5Q3 659 aaKnown RBP13.02□□□□□ -0.32
ZNF544-213ENST00000599227 HAUS7Q99871 368 aa13.02□□□□□ -0.32
ZNF544-213ENST00000599227 ZSCAN16Q9H4T2 348 aaPredicted RBP13.02□□□□□ -0.32
ZNF544-213ENST00000599227 VAT1LQ9HCJ6 419 aa13.02□□□□□ -0.32
ZNF544-213ENST00000599227 G3V3G9 751 aa13.02□□□□□ -0.33
ZNF544-213ENST00000599227 PDIA3P30101 505 aaKnown RBP13.02□□□□□ -0.33
ZNF544-213ENST00000599227 FAM98CQ17RN3 349 aaKnown RBP13.02□□□□□ -0.33
ZNF544-213ENST00000599227 DPCR1Q3MIW9 517 aa13.02□□□□□ -0.33
ZNF544-213ENST00000599227 DCAF8Q5TAQ9 597 aa13.02□□□□□ -0.33
ZNF544-213ENST00000599227 MAGEB6Q8N7X4 407 aa13.02□□□□□ -0.33
ZNF544-213ENST00000599227 SPTLC3Q9NUV7 552 aa13.02□□□□□ -0.33
ZNF544-213ENST00000599227 ANO10Q9NW15 660 aa13.02□□□□□ -0.33
ZNF544-213ENST00000599227 ANKRD18BA2A2Z9 1011 aa13.01□□□□□ -0.33
ZNF544-213ENST00000599227 ERICH4A6NGS2 130 aa13.01□□□□□ -0.33
ZNF544-213ENST00000599227 PLIN2Q99541 437 aa13.01□□□□□ -0.33
ZNF544-213ENST00000599227 ZNF215Q9UL58 517 aaPredicted RBP13.01□□□□□ -0.33
ZNF544-213ENST00000599227 WTIPA6NIX2 430 aaPredicted RBP13.01□□□□□ -0.33
ZNF544-213ENST00000599227 MAST3O60307 1309 aa13.01□□□□□ -0.33
ZNF544-213ENST00000599227 SERPINC1P01008 464 aa13.01□□□□□ -0.33
ZNF544-213ENST00000599227 SKIDA1Q1XH10 827 aa13.01□□□□□ -0.33
ZNF544-213ENST00000599227 NPHP4O75161 1426 aaPredicted RBP13.01□□□□□ -0.33
ZNF544-213ENST00000599227 CPLX2Q6PUV4 134 aaKnown RBP13□□□□□ -0.33
ZNF544-213ENST00000599227 LRRC8AQ8IWT6 810 aa13□□□□□ -0.33
ZNF544-213ENST00000599227 MRPS27Q92552 414 aaKnown RBP13□□□□□ -0.33
ZNF544-213ENST00000599227 GPR101Q96P66 508 aaPredicted RBP13□□□□□ -0.33
ZNF544-213ENST00000599227 MED23Q9ULK4 1368 aa13□□□□□ -0.33
ZNF544-213ENST00000599227 UBE2Q2LH0YL09 131 aa13□□□□□ -0.33
ZNF544-213ENST00000599227 EYA2O00167 538 aa13□□□□□ -0.33
ZNF544-213ENST00000599227 RNF113AO15541 343 aaKnown RBP13□□□□□ -0.33
ZNF544-213ENST00000599227 SLC3A2P08195 630 aaKnown RBP13□□□□□ -0.33
ZNF544-213ENST00000599227 PHKA1P46020 1223 aa13□□□□□ -0.33
ZNF544-213ENST00000599227 RFX5P48382 616 aaPredicted RBP13□□□□□ -0.33
ZNF544-213ENST00000599227 ELF2Q15723 593 aa13□□□□□ -0.33
ZNF544-213ENST00000599227 PIK3C2AO00443 1686 aa13□□□□□ -0.33
ZNF544-213ENST00000599227 ELP1O95163 1332 aa13□□□□□ -0.33
ZNF544-213ENST00000599227 CYP2D7A0A087X1C5 515 aa13□□□□□ -0.33
ZNF544-213ENST00000599227 ERICH2A1L162 156 aa13□□□□□ -0.33
ZNF544-213ENST00000599227 PRKAB2O43741 272 aa13□□□□□ -0.33
ZNF544-213ENST00000599227 BCAMP50895 628 aa13□□□□□ -0.33
ZNF544-213ENST00000599227 NCBP1Q09161 790 aaKnown RBP13□□□□□ -0.33
ZNF544-213ENST00000599227 CFAP100Q494V2 611 aa13□□□□□ -0.33
ZNF544-213ENST00000599227 SYT10Q6XYQ8 523 aa13□□□□□ -0.33
ZNF544-213ENST00000599227 SDR42E1Q8WUS8 393 aa13□□□□□ -0.33
ZNF544-213ENST00000599227 PFKFB2O60825 505 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms