RNA–Protein interactions for RNA: ENST00000598923.1

SNRPA-205, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 2

Gene SNRPA, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-205ENST00000598923 PAPPA2Q9BXP8 1791 aa23.25■■□□□ 1.31
SNRPA-205ENST00000598923 KLHDC4Q8TBB5 520 aa23.25■■□□□ 1.31
SNRPA-205ENST00000598923 TSKSQ9UJT2 592 aa23.25■■□□□ 1.31
SNRPA-205ENST00000598923 LRRFIP2Q9Y608 721 aaKnown RBP23.25■■□□□ 1.31
SNRPA-205ENST00000598923 MMP14P50281 582 aa23.24■■□□□ 1.31
SNRPA-205ENST00000598923 NBPF9Q3BBW0 867 aa23.24■■□□□ 1.31
SNRPA-205ENST00000598923 CCDC102AQ96A19 550 aa23.24■■□□□ 1.31
SNRPA-205ENST00000598923 HDAC5Q9UQL6 1122 aa23.24■■□□□ 1.31
SNRPA-205ENST00000598923 AKAP11Q9UKA4 1901 aa23.23■■□□□ 1.31
SNRPA-205ENST00000598923 LRRC24Q50LG9 513 aa23.23■■□□□ 1.31
SNRPA-205ENST00000598923 TTLL5Q6EMB2 1281 aa23.23■■□□□ 1.31
SNRPA-205ENST00000598923 C15orf52Q6ZUT6 534 aaKnown RBP23.23■■□□□ 1.31
SNRPA-205ENST00000598923 WNT10BO00744 389 aa23.22■■□□□ 1.31
SNRPA-205ENST00000598923 ZNF157P51786 506 aaPredicted RBP23.22■■□□□ 1.31
SNRPA-205ENST00000598923 OGFOD1Q8N543 542 aa23.22■■□□□ 1.31
SNRPA-205ENST00000598923 CD209Q9NNX6 404 aa23.22■■□□□ 1.31
SNRPA-205ENST00000598923 RIPOR2Q9Y4F9 1068 aa23.22■■□□□ 1.31
SNRPA-205ENST00000598923 ECM29Q5VYK3 1845 aa23.22■■□□□ 1.31
SNRPA-205ENST00000598923 GNAI3P08754 354 aa23.21■■□□□ 1.31
SNRPA-205ENST00000598923 TMEM57Q8N5G2 664 aa23.21■■□□□ 1.31
SNRPA-205ENST00000598923 SLC10A3P09131 477 aa23.2■■□□□ 1.3
SNRPA-205ENST00000598923 FKBP1BP68106 108 aa23.2■■□□□ 1.3
SNRPA-205ENST00000598923 GTF2IP78347 998 aa23.2■■□□□ 1.3
SNRPA-205ENST00000598923 METTL24Q5JXM2 366 aa23.2■■□□□ 1.3
SNRPA-205ENST00000598923 FTSJ3Q8IY81 847 aaKnown RBP23.2■■□□□ 1.3
SNRPA-205ENST00000598923 ABHD8Q96I13 439 aa23.2■■□□□ 1.3
SNRPA-205ENST00000598923 SCAF8Q9UPN6 1271 aaKnown RBP23.2■■□□□ 1.3
SNRPA-205ENST00000598923 MROH5Q6ZUA9 1318 aa23.19■■□□□ 1.3
SNRPA-205ENST00000598923 KIF23Q02241 960 aaPredicted RBP23.19■■□□□ 1.3
SNRPA-205ENST00000598923 ZBED3Q96IU2 234 aaPredicted RBP23.19■■□□□ 1.3
SNRPA-205ENST00000598923 RFX5P48382 616 aaPredicted RBP23.18■■□□□ 1.3
SNRPA-205ENST00000598923 IL1R1P14778 569 aa23.17■■□□□ 1.3
SNRPA-205ENST00000598923 PTPN12Q05209 780 aaKnown RBP23.17■■□□□ 1.3
SNRPA-205ENST00000598923 UBE4AQ14139 1066 aa23.17■■□□□ 1.3
SNRPA-205ENST00000598923 ZNF804AQ7Z570 1209 aa23.17■■□□□ 1.3
SNRPA-205ENST00000598923 KIAA0825Q8IV33 1275 aa23.17■■□□□ 1.3
SNRPA-205ENST00000598923 DZIP1LQ8IYY4 767 aaKnown RBP23.17■■□□□ 1.3
SNRPA-205ENST00000598923 SIL1Q9H173 461 aa23.17■■□□□ 1.3
SNRPA-205ENST00000598923 EYA2O00167 538 aa23.16■■□□□ 1.3
SNRPA-205ENST00000598923 SASH1O94885 1247 aa23.16■■□□□ 1.3
SNRPA-205ENST00000598923 PRAMEF18Q5VWM3 479 aa23.16■■□□□ 1.3
SNRPA-205ENST00000598923 CERS5Q8N5B7 392 aa23.16■■□□□ 1.3
SNRPA-205ENST00000598923 SAGE1Q9NXZ1 904 aa23.16■■□□□ 1.3
SNRPA-205ENST00000598923 HDAC9Q9UKV0 1011 aa23.16■■□□□ 1.3
SNRPA-205ENST00000598923 GNAI2P04899 355 aa23.15■■□□□ 1.3
SNRPA-205ENST00000598923 MOB2Q70IA6 237 aa23.15■■□□□ 1.3
SNRPA-205ENST00000598923 RASAL3Q86YV0 1011 aa23.15■■□□□ 1.3
SNRPA-205ENST00000598923 ITPRIPQ8IWB1 547 aa23.15■■□□□ 1.3
SNRPA-205ENST00000598923 PA2G4Q9UQ80 394 aaKnown RBP23.15■■□□□ 1.3
SNRPA-205ENST00000598923 PDE8BO95263 885 aa23.14■■□□□ 1.29
SNRPA-205ENST00000598923 RLBP1P12271 317 aa23.14■■□□□ 1.29
SNRPA-205ENST00000598923 GYG1P46976 350 aa23.14■■□□□ 1.29
SNRPA-205ENST00000598923 YTHDC1Q96MU7 727 aaKnown RBP23.14■■□□□ 1.29
SNRPA-205ENST00000598923 CSRNP1Q96S65 589 aa23.14■■□□□ 1.29
SNRPA-205ENST00000598923 JAG2Q9Y219 1238 aa23.14■■□□□ 1.29
SNRPA-205ENST00000598923 SRGAP3O43295 1099 aa23.13■■□□□ 1.29
SNRPA-205ENST00000598923 FKBP1AP62942 108 aaKnown RBP23.13■■□□□ 1.29
SNRPA-205ENST00000598923 MTMR14Q8NCE2 650 aa23.13■■□□□ 1.29
SNRPA-205ENST00000598923 RNF186Q9NXI6 227 aa23.13■■□□□ 1.29
SNRPA-205ENST00000598923 RCAN3Q9UKA8 241 aa23.13■■□□□ 1.29
SNRPA-205ENST00000598923 HIBADHP31937 336 aaKnown RBP23.12■■□□□ 1.29
SNRPA-205ENST00000598923 VPS37DQ86XT2 251 aa23.12■■□□□ 1.29
SNRPA-205ENST00000598923 APOBEC3FQ8IUX4 373 aaKnown RBP23.12■■□□□ 1.29
SNRPA-205ENST00000598923 REM2Q8IYK8 340 aaPredicted RBP23.12■■□□□ 1.29
SNRPA-205ENST00000598923 PANK1Q8TE04 598 aa23.12■■□□□ 1.29
SNRPA-205ENST00000598923 ARAP2Q8WZ64 1704 aa23.12■■□□□ 1.29
SNRPA-205ENST00000598923 UBE2Q2LH0YL09 131 aa23.11■■□□□ 1.29
SNRPA-205ENST00000598923 ATG9AQ7Z3C6 839 aa23.11■■□□□ 1.29
SNRPA-205ENST00000598923 VGLL2Q8N8G2 317 aa23.11■■□□□ 1.29
SNRPA-205ENST00000598923 FAM84BQ96KN1 310 aaPredicted RBP23.11■■□□□ 1.29
SNRPA-205ENST00000598923 COL1A1P02452 1464 aaPredicted RBP23.11■■□□□ 1.29
SNRPA-205ENST00000598923 MCOLN1Q9GZU1 580 aa23.1■■□□□ 1.29
SNRPA-205ENST00000598923 CEP126Q9P2H0 1117 aa23.1■■□□□ 1.29
SNRPA-205ENST00000598923 TRPA1O75762 1119 aa23.09■■□□□ 1.29
SNRPA-205ENST00000598923 IFIT1P09914 478 aaKnown RBP23.09■■□□□ 1.29
SNRPA-205ENST00000598923 NF2P35240 595 aa23.09■■□□□ 1.29
SNRPA-205ENST00000598923 PUM3Q15397 648 aaKnown RBP23.09■■□□□ 1.29
SNRPA-205ENST00000598923 DLGAP5Q15398 846 aa23.09■■□□□ 1.29
SNRPA-205ENST00000598923 CAVIN4Q5BKX8 364 aa23.09■■□□□ 1.29
SNRPA-205ENST00000598923 C1orf115Q9H7X2 142 aa23.09■■□□□ 1.29
SNRPA-205ENST00000598923 PCDHAC2Q9Y5I4 1007 aa23.09■■□□□ 1.29
SNRPA-205ENST00000598923 FAM205AQ6ZU69 1335 aa23.08■■□□□ 1.29
SNRPA-205ENST00000598923 CIAO1O76071 339 aa23.08■■□□□ 1.29
SNRPA-205ENST00000598923 IL15P40933 162 aaPredicted RBP23.08■■□□□ 1.29
SNRPA-205ENST00000598923 TDRD7Q8NHU6 1098 aaKnown RBP23.08■■□□□ 1.29
SNRPA-205ENST00000598923 COPRSQ9NQ92 184 aa23.08■■□□□ 1.29
SNRPA-205ENST00000598923 FBXO3Q9UK99 471 aa23.08■■□□□ 1.29
SNRPA-205ENST00000598923 IQSEC3Q9UPP2 1182 aaPredicted RBP23.08■■□□□ 1.29
SNRPA-205ENST00000598923 F8W031 263 aaPredicted RBP23.07■■□□□ 1.28
SNRPA-205ENST00000598923 FRAT2O75474 233 aaPredicted RBP23.07■■□□□ 1.28
SNRPA-205ENST00000598923 MS4A1P11836 297 aa23.07■■□□□ 1.28
SNRPA-205ENST00000598923 BCAMP50895 628 aa23.07■■□□□ 1.28
SNRPA-205ENST00000598923 TTLL12Q14166 644 aaPredicted RBP23.07■■□□□ 1.28
SNRPA-205ENST00000598923 FBXO33Q7Z6M2 555 aa23.07■■□□□ 1.28
SNRPA-205ENST00000598923 LAMB1P07942 1786 aa23.06■■□□□ 1.28
SNRPA-205ENST00000598923 PNMA6EA0A0J9YXQ4 647 aa23.06■■□□□ 1.28
SNRPA-205ENST00000598923 ZBTB7BO15156 539 aaPredicted RBP23.06■■□□□ 1.28
SNRPA-205ENST00000598923 SLC5A1P13866 664 aa23.06■■□□□ 1.28
SNRPA-205ENST00000598923 FGFR2P21802 821 aa23.06■■□□□ 1.28
SNRPA-205ENST00000598923 MTX1Q13505 466 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms