RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 HIRAP54198 1017 aaPredicted RBP21.37■■□□□ 1.01
SHKBP1-212ENST00000596163 TFCP2Q12800 502 aa21.37■■□□□ 1.01
SHKBP1-212ENST00000596163 MXD3Q9BW11 206 aa21.37■■□□□ 1.01
SHKBP1-212ENST00000596163 MYOZ2Q9NPC6 264 aa21.37■■□□□ 1.01
SHKBP1-212ENST00000596163 ITGBL1O95965 494 aaPredicted RBP21.36■■□□□ 1.01
SHKBP1-212ENST00000596163 RRP1P56182 461 aaKnown RBP21.36■■□□□ 1.01
SHKBP1-212ENST00000596163 C20orf194Q5TEA3 1177 aa21.36■■□□□ 1.01
SHKBP1-212ENST00000596163 TBC1D22AQ8WUA7 517 aa21.36■■□□□ 1.01
SHKBP1-212ENST00000596163 NOP58Q9Y2X3 529 aaKnown RBP21.36■■□□□ 1.01
SHKBP1-212ENST00000596163 SCN9AQ15858 1988 aa21.36■■□□□ 1.01
SHKBP1-212ENST00000596163 KIAA0825Q8IV33 1275 aa21.35■■□□□ 1.01
SHKBP1-212ENST00000596163 A0A1B0GUL6 1792 aa21.35■■□□□ 1.01
SHKBP1-212ENST00000596163 HSP90AB4PQ58FF6 505 aa21.34■■□□□ 1.01
SHKBP1-212ENST00000596163 CDC37L1Q7L3B6 337 aa21.34■■□□□ 1.01
SHKBP1-212ENST00000596163 DCPSQ96C86 337 aaKnown RBP21.34■■□□□ 1.01
SHKBP1-212ENST00000596163 PASKQ96RG2 1323 aa21.33■■□□□ 1.01
SHKBP1-212ENST00000596163 TIMM10P62072 90 aa21.33■■□□□ 1.01
SHKBP1-212ENST00000596163 MFSD14BQ5SR56 506 aa21.33■■□□□ 1.01
SHKBP1-212ENST00000596163 NEUROD6Q96NK8 337 aa21.33■■□□□ 1.01
SHKBP1-212ENST00000596163 GPR108Q9NPR9 543 aa21.33■■□□□ 1.01
SHKBP1-212ENST00000596163 IQSEC3Q9UPP2 1182 aaPredicted RBP21.33■■□□□ 1.01
SHKBP1-212ENST00000596163 JAG2Q9Y219 1238 aa21.33■■□□□ 1.01
SHKBP1-212ENST00000596163 A0A1B0GUL7 405 aa21.32■■□□□ 1
SHKBP1-212ENST00000596163 SEMA3EO15041 775 aa21.32■■□□□ 1
SHKBP1-212ENST00000596163 CHAF1AQ13111 956 aaPredicted RBP21.32■■□□□ 1
SHKBP1-212ENST00000596163 SCARF1Q14162 830 aa21.32■■□□□ 1
SHKBP1-212ENST00000596163 GORABQ5T7V8 394 aa21.32■■□□□ 1
SHKBP1-212ENST00000596163 ERC1Q8IUD2 1116 aa21.32■■□□□ 1
SHKBP1-212ENST00000596163 CERS5Q8N5B7 392 aa21.32■■□□□ 1
SHKBP1-212ENST00000596163 ADAMTSL1Q8N6G6 1762 aa21.31■■□□□ 1
SHKBP1-212ENST00000596163 ZBTB22O15209 634 aa21.31■■□□□ 1
SHKBP1-212ENST00000596163 EGFRP00533 1210 aa21.31■■□□□ 1
SHKBP1-212ENST00000596163 WDR66Q8TBY9 1149 aa21.31■■□□□ 1
SHKBP1-212ENST00000596163 XAGE2Q96GT9 111 aa21.31■■□□□ 1
SHKBP1-212ENST00000596163 DENND2AQ9ULE3 1009 aa21.31■■□□□ 1
SHKBP1-212ENST00000596163 PSME4Q14997 1843 aa21.3■■□□□ 1
SHKBP1-212ENST00000596163 F8W031 263 aaPredicted RBP21.3■■□□□ 1
SHKBP1-212ENST00000596163 DLGAP5Q15398 846 aa21.3■■□□□ 1
SHKBP1-212ENST00000596163 CCDC102BQ68D86 513 aa21.3■■□□□ 1
SHKBP1-212ENST00000596163 SUGT1Q9Y2Z0 365 aa21.3■■□□□ 1
SHKBP1-212ENST00000596163 TMEM88BA6NKF7 163 aa21.29■■□□□ 1
SHKBP1-212ENST00000596163 KRT26Q7Z3Y9 468 aa21.29■■□□□ 1
SHKBP1-212ENST00000596163 SULF1Q8IWU6 871 aa21.29■■□□□ 1
SHKBP1-212ENST00000596163 GLIS2Q9BZE0 524 aaPredicted RBP21.29■■□□□ 1
SHKBP1-212ENST00000596163 CREBZFQ9NS37 354 aa21.29■■□□□ 1
SHKBP1-212ENST00000596163 ADORA1P30542 326 aa21.28■■□□□ 1
SHKBP1-212ENST00000596163 PHKA1P46020 1223 aa21.28■■□□□ 1
SHKBP1-212ENST00000596163 USP48Q86UV5 1035 aa21.28■■□□□ 1
SHKBP1-212ENST00000596163 MTMR14Q8NCE2 650 aa21.28■■□□□ 1
SHKBP1-212ENST00000596163 GGA3Q9NZ52 723 aa21.28■■□□□ 1
SHKBP1-212ENST00000596163 TTF2Q9UNY4 1162 aaKnown RBP21.28■■□□□ 1
SHKBP1-212ENST00000596163 PITPNM2Q9BZ72 1349 aa21.28■■□□□ 1
SHKBP1-212ENST00000596163 WNT10BO00744 389 aa21.27■■□□□ 1
SHKBP1-212ENST00000596163 MYO1BO43795 1136 aa21.27■■□□□ 1
SHKBP1-212ENST00000596163 RBM5P52756 815 aaKnown RBP eCLIP21.27■■□□□ 1
SHKBP1-212ENST00000596163 TNNI3KQ59H18 835 aa21.27■■□□□ 1
SHKBP1-212ENST00000596163 ANGEL2Q5VTE6 544 aaKnown RBP21.27■■□□□ 1
SHKBP1-212ENST00000596163 SERPINA10Q9UK55 444 aa21.27■■□□□ 1
SHKBP1-212ENST00000596163 FPGT-TNNI3KV9GXZ4 949 aa21.27■■□□□ 1
SHKBP1-212ENST00000596163 HDLBPQ00341 1268 aaKnown RBP21.26■□□□□ 0.99
SHKBP1-212ENST00000596163 NBPF9Q3BBW0 867 aa21.26■□□□□ 0.99
SHKBP1-212ENST00000596163 CFAP100Q494V2 611 aa21.26■□□□□ 0.99
SHKBP1-212ENST00000596163 CCDC158Q5M9N0 1113 aa21.26■□□□□ 0.99
SHKBP1-212ENST00000596163 ZGPATQ8N5A5 531 aaKnown RBP21.26■□□□□ 0.99
SHKBP1-212ENST00000596163 MRIQ9BWK5 157 aa21.26■□□□□ 0.99
SHKBP1-212ENST00000596163 EXOC6BQ9Y2D4 811 aa21.26■□□□□ 0.99
SHKBP1-212ENST00000596163 CEP350Q5VT06 3117 aa21.26■□□□□ 0.99
SHKBP1-212ENST00000596163 MAST3O60307 1309 aa21.26■□□□□ 0.99
SHKBP1-212ENST00000596163 TRAF5O00463 557 aa21.25■□□□□ 0.99
SHKBP1-212ENST00000596163 RAB11FIP3O75154 756 aa21.25■□□□□ 0.99
SHKBP1-212ENST00000596163 UQCRFS1P1P0C7P4 283 aa21.25■□□□□ 0.99
SHKBP1-212ENST00000596163 SIRT2Q8IXJ6 389 aa21.25■□□□□ 0.99
SHKBP1-212ENST00000596163 ZBED3Q96IU2 234 aaPredicted RBP21.25■□□□□ 0.99
SHKBP1-212ENST00000596163 KIF1BPQ96EK5 621 aa21.24■□□□□ 0.99
SHKBP1-212ENST00000596163 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.24■□□□□ 0.99
SHKBP1-212ENST00000596163 PDS5AQ29RF7 1337 aaKnown RBP21.24■□□□□ 0.99
SHKBP1-212ENST00000596163 SALL1Q9NSC2 1324 aa21.24■□□□□ 0.99
SHKBP1-212ENST00000596163 CELF2O95319 508 aaKnown RBP21.23■□□□□ 0.99
SHKBP1-212ENST00000596163 APOBEC3FQ8IUX4 373 aaKnown RBP21.23■□□□□ 0.99
SHKBP1-212ENST00000596163 ASTN2O75129 1339 aaPredicted RBP21.23■□□□□ 0.99
SHKBP1-212ENST00000596163 SPDYE2BA6NHP3 402 aa21.22■□□□□ 0.99
SHKBP1-212ENST00000596163 SPDYE6P0CI01 402 aa21.22■□□□□ 0.99
SHKBP1-212ENST00000596163 CRKP46108 304 aa21.22■□□□□ 0.99
SHKBP1-212ENST00000596163 HTRA3P83110 453 aa21.22■□□□□ 0.99
SHKBP1-212ENST00000596163 AAMPQ13685 434 aa21.22■□□□□ 0.99
SHKBP1-212ENST00000596163 TTC39AQ5SRH9 613 aa21.22■□□□□ 0.99
SHKBP1-212ENST00000596163 SPTY2D1Q68D10 685 aaPredicted RBP21.22■□□□□ 0.99
SHKBP1-212ENST00000596163 RHPN1Q8TCX5 695 aa21.22■□□□□ 0.99
SHKBP1-212ENST00000596163 TEKT1Q969V4 418 aa21.22■□□□□ 0.99
SHKBP1-212ENST00000596163 ADM5C9JUS6 153 aa21.21■□□□□ 0.99
SHKBP1-212ENST00000596163 LDHBP07195 334 aaKnown RBP21.21■□□□□ 0.99
SHKBP1-212ENST00000596163 ARID4AP29374 1257 aaPredicted RBP21.21■□□□□ 0.99
SHKBP1-212ENST00000596163 RASGRF1Q13972 1273 aa21.21■□□□□ 0.99
SHKBP1-212ENST00000596163 CLASRPQ8N2M8 674 aaKnown RBP21.21■□□□□ 0.99
SHKBP1-212ENST00000596163 ABT1Q9ULW3 272 aaKnown RBP21.21■□□□□ 0.99
SHKBP1-212ENST00000596163 FMR1Q06787 632 aaKnown RBP eCLIP21.2■□□□□ 0.98
SHKBP1-212ENST00000596163 CST9Q5W186 159 aa21.2■□□□□ 0.98
SHKBP1-212ENST00000596163 HHIPL2Q6UWX4 724 aa21.2■□□□□ 0.98
SHKBP1-212ENST00000596163 DNAJC5GQ8N7S2 189 aa21.2■□□□□ 0.98
SHKBP1-212ENST00000596163 SPATA5Q8NB90 893 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms