RNA–Protein interactions for RNA: ENST00000592905.5

ERCC1-217, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 882 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-217ENST00000592905 F8W031 263 aaPredicted RBP18.78■□□□□ 0.6
ERCC1-217ENST00000592905 SASH1O94885 1247 aa18.78■□□□□ 0.6
ERCC1-217ENST00000592905 APLP1P51693 650 aa18.78■□□□□ 0.6
ERCC1-217ENST00000592905 TIMM10P62072 90 aa18.78■□□□□ 0.6
ERCC1-217ENST00000592905 CHAF1AQ13111 956 aaPredicted RBP18.78■□□□□ 0.6
ERCC1-217ENST00000592905 KIF4BQ2VIQ3 1234 aa18.78■□□□□ 0.6
ERCC1-217ENST00000592905 CEP85Q6P2H3 762 aa18.78■□□□□ 0.6
ERCC1-217ENST00000592905 TRAF5O00463 557 aa18.77■□□□□ 0.6
ERCC1-217ENST00000592905 FRAT2O75474 233 aaPredicted RBP18.77■□□□□ 0.6
ERCC1-217ENST00000592905 SURF6O75683 361 aaKnown RBP18.77■□□□□ 0.6
ERCC1-217ENST00000592905 ADORA1P30542 326 aa18.77■□□□□ 0.6
ERCC1-217ENST00000592905 MYOZ2Q9NPC6 264 aa18.77■□□□□ 0.6
ERCC1-217ENST00000592905 ZBTB40Q9NUA8 1239 aa18.77■□□□□ 0.6
ERCC1-217ENST00000592905 MYO3BQ8WXR4 1341 aa18.76■□□□□ 0.59
ERCC1-217ENST00000592905 PASKQ96RG2 1323 aa18.76■□□□□ 0.59
ERCC1-217ENST00000592905 ZNF609O15014 1411 aa18.76■□□□□ 0.59
ERCC1-217ENST00000592905 SCARF1Q14162 830 aa18.76■□□□□ 0.59
ERCC1-217ENST00000592905 DLK2Q6UY11 383 aa18.76■□□□□ 0.59
ERCC1-217ENST00000592905 GLIS2Q9BZE0 524 aaPredicted RBP18.76■□□□□ 0.59
ERCC1-217ENST00000592905 PGAP2Q9UHJ9 254 aa18.76■□□□□ 0.59
ERCC1-217ENST00000592905 FAM205AQ6ZU69 1335 aa18.75■□□□□ 0.59
ERCC1-217ENST00000592905 OS9Q13438 667 aaPredicted RBP18.75■□□□□ 0.59
ERCC1-217ENST00000592905 OGFOD1Q8N543 542 aa18.75■□□□□ 0.59
ERCC1-217ENST00000592905 TRPM7Q96QT4 1865 aa18.74■□□□□ 0.59
ERCC1-217ENST00000592905 A0A1B0GUL7 405 aa18.74■□□□□ 0.59
ERCC1-217ENST00000592905 RRP1P56182 461 aaKnown RBP18.74■□□□□ 0.59
ERCC1-217ENST00000592905 GRIK5Q16478 980 aa18.74■□□□□ 0.59
ERCC1-217ENST00000592905 NBPF9Q3BBW0 867 aa18.74■□□□□ 0.59
ERCC1-217ENST00000592905 MFSD14BQ5SR56 506 aa18.74■□□□□ 0.59
ERCC1-217ENST00000592905 USP48Q86UV5 1035 aa18.74■□□□□ 0.59
ERCC1-217ENST00000592905 ZC3H15Q8WU90 426 aaKnown RBP18.74■□□□□ 0.59
ERCC1-217ENST00000592905 NEUROD6Q96NK8 337 aa18.74■□□□□ 0.59
ERCC1-217ENST00000592905 SCAF8Q9UPN6 1271 aaKnown RBP18.74■□□□□ 0.59
ERCC1-217ENST00000592905 ARAP2Q8WZ64 1704 aa18.74■□□□□ 0.59
ERCC1-217ENST00000592905 PHKA1P46020 1223 aa18.73■□□□□ 0.59
ERCC1-217ENST00000592905 HDAC9Q9UKV0 1011 aa18.73■□□□□ 0.59
ERCC1-217ENST00000592905 AKAP2Q9Y2D5 859 aa18.73■□□□□ 0.59
ERCC1-217ENST00000592905 PCDHAC2Q9Y5I4 1007 aa18.73■□□□□ 0.59
ERCC1-217ENST00000592905 FKBP1AP62942 108 aaKnown RBP18.72■□□□□ 0.59
ERCC1-217ENST00000592905 ANGEL2Q5VTE6 544 aaKnown RBP18.72■□□□□ 0.59
ERCC1-217ENST00000592905 SIRT2Q8IXJ6 389 aa18.72■□□□□ 0.59
ERCC1-217ENST00000592905 DCPSQ96C86 337 aaKnown RBP18.72■□□□□ 0.59
ERCC1-217ENST00000592905 XAGE2Q96GT9 111 aa18.72■□□□□ 0.59
ERCC1-217ENST00000592905 GGA3Q9NZ52 723 aa18.72■□□□□ 0.59
ERCC1-217ENST00000592905 ADM5C9JUS6 153 aa18.71■□□□□ 0.59
ERCC1-217ENST00000592905 CCDC102BQ68D86 513 aa18.71■□□□□ 0.59
ERCC1-217ENST00000592905 CDC37L1Q7L3B6 337 aa18.71■□□□□ 0.59
ERCC1-217ENST00000592905 TTF2Q9UNY4 1162 aaKnown RBP18.71■□□□□ 0.59
ERCC1-217ENST00000592905 EXOC6BQ9Y2D4 811 aa18.71■□□□□ 0.59
ERCC1-217ENST00000592905 NOP58Q9Y2X3 529 aaKnown RBP18.71■□□□□ 0.59
ERCC1-217ENST00000592905 WNT10BO00744 389 aa18.7■□□□□ 0.58
ERCC1-217ENST00000592905 KRT26Q7Z3Y9 468 aa18.7■□□□□ 0.58
ERCC1-217ENST00000592905 RPAP2Q8IXW5 612 aaPredicted RBP18.7■□□□□ 0.58
ERCC1-217ENST00000592905 CHMP4BQ9H444 224 aaKnown RBP18.7■□□□□ 0.58
ERCC1-217ENST00000592905 ZNF408Q9H9D4 720 aa18.7■□□□□ 0.58
ERCC1-217ENST00000592905 COL1A1P02452 1464 aaPredicted RBP18.7■□□□□ 0.58
ERCC1-217ENST00000592905 TMEM88BA6NKF7 163 aa18.69■□□□□ 0.58
ERCC1-217ENST00000592905 RBM5P52756 815 aaKnown RBP eCLIP18.69■□□□□ 0.58
ERCC1-217ENST00000592905 DLGAP5Q15398 846 aa18.69■□□□□ 0.58
ERCC1-217ENST00000592905 CFAP100Q494V2 611 aa18.69■□□□□ 0.58
ERCC1-217ENST00000592905 CST9Q5W186 159 aa18.69■□□□□ 0.58
ERCC1-217ENST00000592905 DNAJC5GQ8N7S2 189 aa18.69■□□□□ 0.58
ERCC1-217ENST00000592905 GNL3LQ9NVN8 582 aaKnown RBP18.69■□□□□ 0.58
ERCC1-217ENST00000592905 APBB1O00213 710 aa18.68■□□□□ 0.58
ERCC1-217ENST00000592905 TNNI3KQ59H18 835 aa18.68■□□□□ 0.58
ERCC1-217ENST00000592905 GORABQ5T7V8 394 aa18.68■□□□□ 0.58
ERCC1-217ENST00000592905 TBC1D22AQ8WUA7 517 aa18.68■□□□□ 0.58
ERCC1-217ENST00000592905 BCL11AQ9H165 835 aa18.68■□□□□ 0.58
ERCC1-217ENST00000592905 CREBZFQ9NS37 354 aa18.68■□□□□ 0.58
ERCC1-217ENST00000592905 FPGT-TNNI3KV9GXZ4 949 aa18.68■□□□□ 0.58
ERCC1-217ENST00000592905 AOX1Q06278 1338 aa18.68■□□□□ 0.58
ERCC1-217ENST00000592905 CELF2O95319 508 aaKnown RBP18.67■□□□□ 0.58
ERCC1-217ENST00000592905 MMP14P50281 582 aa18.67■□□□□ 0.58
ERCC1-217ENST00000592905 SULF1Q8IWU6 871 aa18.67■□□□□ 0.58
ERCC1-217ENST00000592905 ZBED3Q96IU2 234 aaPredicted RBP18.67■□□□□ 0.58
ERCC1-217ENST00000592905 PRMT6Q96LA8 375 aaPredicted RBP18.67■□□□□ 0.58
ERCC1-217ENST00000592905 CRBNQ96SW2 442 aa18.67■□□□□ 0.58
ERCC1-217ENST00000592905 ECM29Q5VYK3 1845 aa18.67■□□□□ 0.58
ERCC1-217ENST00000592905 HMMRO75330 724 aa18.66■□□□□ 0.58
ERCC1-217ENST00000592905 RASGRF1Q13972 1273 aa18.66■□□□□ 0.58
ERCC1-217ENST00000592905 PRAMEF18Q5VWM3 479 aa18.66■□□□□ 0.58
ERCC1-217ENST00000592905 WDR66Q8TBY9 1149 aa18.66■□□□□ 0.58
ERCC1-217ENST00000592905 DBNDD2Q9BQY9 259 aa18.66■□□□□ 0.58
ERCC1-217ENST00000592905 CCDC8Q9H0W5 538 aaPredicted RBP18.66■□□□□ 0.58
ERCC1-217ENST00000592905 MKRN1Q9UHC7 482 aaKnown RBP18.66■□□□□ 0.58
ERCC1-217ENST00000592905 DENND2AQ9ULE3 1009 aa18.66■□□□□ 0.58
ERCC1-217ENST00000592905 PCNTO95613 3336 aa18.65■□□□□ 0.58
ERCC1-217ENST00000592905 CLRN2A0PK11 232 aa18.65■□□□□ 0.58
ERCC1-217ENST00000592905 SPDYE2BA6NHP3 402 aa18.65■□□□□ 0.58
ERCC1-217ENST00000592905 SPDYE6P0CI01 402 aa18.65■□□□□ 0.58
ERCC1-217ENST00000592905 CRKP46108 304 aa18.65■□□□□ 0.58
ERCC1-217ENST00000592905 MTMR14Q8NCE2 650 aa18.65■□□□□ 0.58
ERCC1-217ENST00000592905 EAF2Q96CJ1 260 aaPredicted RBP18.65■□□□□ 0.58
ERCC1-217ENST00000592905 IL1RAPL2Q9NP60 686 aa18.65■□□□□ 0.58
ERCC1-217ENST00000592905 GPR108Q9NPR9 543 aa18.65■□□□□ 0.58
ERCC1-217ENST00000592905 ABT1Q9ULW3 272 aaKnown RBP18.65■□□□□ 0.58
ERCC1-217ENST00000592905 PI16Q6UXB8 463 aa18.64■□□□□ 0.57
ERCC1-217ENST00000592905 CDCA5Q96FF9 252 aa18.64■□□□□ 0.57
ERCC1-217ENST00000592905 TLR7Q9NYK1 1049 aaKnown RBP18.64■□□□□ 0.57
ERCC1-217ENST00000592905 SEMA3EO15041 775 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms