RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 LRRC24Q50LG9 513 aa26.74■■□□□ 1.87
R3HDM4-206ENST00000590454 CEP85Q6P2H3 762 aa26.74■■□□□ 1.87
R3HDM4-206ENST00000590454 LDHAL6AQ6ZMR3 332 aa26.74■■□□□ 1.87
R3HDM4-206ENST00000590454 ZC3H12CQ9C0D7 883 aaKnown RBP26.74■■□□□ 1.87
R3HDM4-206ENST00000590454 GGA3Q9NZ52 723 aa26.74■■□□□ 1.87
R3HDM4-206ENST00000590454 ATP8B2P98198 1209 aa26.73■■□□□ 1.87
R3HDM4-206ENST00000590454 CTU1Q7Z7A3 348 aaKnown RBP26.73■■□□□ 1.87
R3HDM4-206ENST00000590454 TBC1D16Q8TBP0 767 aa26.73■■□□□ 1.87
R3HDM4-206ENST00000590454 HELBQ8NG08 1087 aaPredicted RBP26.72■■□□□ 1.87
R3HDM4-206ENST00000590454 CDCA5Q96FF9 252 aa26.72■■□□□ 1.87
R3HDM4-206ENST00000590454 A0A1B0GUL6 1792 aa26.71■■□□□ 1.87
R3HDM4-206ENST00000590454 G3V3G9 751 aa26.71■■□□□ 1.87
R3HDM4-206ENST00000590454 CHRNDQ07001 517 aa26.71■■□□□ 1.87
R3HDM4-206ENST00000590454 POLA2Q14181 598 aa26.71■■□□□ 1.87
R3HDM4-206ENST00000590454 DCAF8Q5TAQ9 597 aa26.71■■□□□ 1.87
R3HDM4-206ENST00000590454 SIL1Q9H173 461 aa26.71■■□□□ 1.87
R3HDM4-206ENST00000590454 CNNM1Q9NRU3 951 aa26.71■■□□□ 1.87
R3HDM4-206ENST00000590454 RIPOR2Q9Y4F9 1068 aa26.71■■□□□ 1.87
R3HDM4-206ENST00000590454 SIRT2Q8IXJ6 389 aa26.7■■□□□ 1.86
R3HDM4-206ENST00000590454 ANKIB1Q9P2G1 1089 aa26.7■■□□□ 1.86
R3HDM4-206ENST00000590454 SNAP23O00161 211 aa26.69■■□□□ 1.86
R3HDM4-206ENST00000590454 TAF5LO75529 589 aa26.69■■□□□ 1.86
R3HDM4-206ENST00000590454 ATG9AQ7Z3C6 839 aa26.69■■□□□ 1.86
R3HDM4-206ENST00000590454 EXOC6Q8TAG9 804 aa26.69■■□□□ 1.86
R3HDM4-206ENST00000590454 SSH3Q8TE77 659 aa26.69■■□□□ 1.86
R3HDM4-206ENST00000590454 PODXL2Q9NZ53 605 aa26.69■■□□□ 1.86
R3HDM4-206ENST00000590454 ASTN2O75129 1339 aaPredicted RBP26.68■■□□□ 1.86
R3HDM4-206ENST00000590454 FKBP1BP68106 108 aa26.68■■□□□ 1.86
R3HDM4-206ENST00000590454 RASAL3Q86YV0 1011 aa26.68■■□□□ 1.86
R3HDM4-206ENST00000590454 CHMP4BQ9H444 224 aaKnown RBP26.68■■□□□ 1.86
R3HDM4-206ENST00000590454 COPRSQ9NQ92 184 aa26.68■■□□□ 1.86
R3HDM4-206ENST00000590454 XDHP47989 1333 aa26.67■■□□□ 1.86
R3HDM4-206ENST00000590454 ZNF280AP59817 542 aaPredicted RBP26.67■■□□□ 1.86
R3HDM4-206ENST00000590454 SCARF1Q14162 830 aa26.67■■□□□ 1.86
R3HDM4-206ENST00000590454 ANGEL2Q5VTE6 544 aaKnown RBP26.67■■□□□ 1.86
R3HDM4-206ENST00000590454 PRPF38BQ5VTL8 546 aaKnown RBP26.67■■□□□ 1.86
R3HDM4-206ENST00000590454 AGBL3Q8NEM8 1001 aa26.67■■□□□ 1.86
R3HDM4-206ENST00000590454 POLR2AP24928 1970 aaKnown RBP26.67■■□□□ 1.86
R3HDM4-206ENST00000590454 EYA2O00167 538 aa26.66■■□□□ 1.86
R3HDM4-206ENST00000590454 UFL1O94874 794 aa26.66■■□□□ 1.86
R3HDM4-206ENST00000590454 PKN2Q16513 984 aaKnown RBP26.65■■□□□ 1.86
R3HDM4-206ENST00000590454 RSBN1LQ6PCB5 846 aaPredicted RBP26.65■■□□□ 1.86
R3HDM4-206ENST00000590454 GGA1Q9UJY5 639 aa26.65■■□□□ 1.86
R3HDM4-206ENST00000590454 PCDHB15Q9Y5E8 787 aa26.65■■□□□ 1.86
R3HDM4-206ENST00000590454 TNRC18O15417 2968 aaPredicted RBP26.65■■□□□ 1.86
R3HDM4-206ENST00000590454 KLRK1P26718 216 aa26.64■■□□□ 1.86
R3HDM4-206ENST00000590454 ANKRD2Q9GZV1 360 aa26.64■■□□□ 1.86
R3HDM4-206ENST00000590454 HPS5Q9UPZ3 1129 aa26.64■■□□□ 1.86
R3HDM4-206ENST00000590454 AKAP11Q9UKA4 1901 aa26.64■■□□□ 1.86
R3HDM4-206ENST00000590454 RPAP2Q8IXW5 612 aaPredicted RBP26.63■■□□□ 1.85
R3HDM4-206ENST00000590454 VGLL2Q8N8G2 317 aa26.63■■□□□ 1.85
R3HDM4-206ENST00000590454 HDAC9Q9UKV0 1011 aa26.63■■□□□ 1.85
R3HDM4-206ENST00000590454 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.63■■□□□ 1.85
R3HDM4-206ENST00000590454 MROH5Q6ZUA9 1318 aa26.63■■□□□ 1.85
R3HDM4-206ENST00000590454 CIAO1O76071 339 aa26.62■■□□□ 1.85
R3HDM4-206ENST00000590454 CENPBP07199 599 aaPredicted RBP26.62■■□□□ 1.85
R3HDM4-206ENST00000590454 ATP2B4P23634 1241 aa26.62■■□□□ 1.85
R3HDM4-206ENST00000590454 METTL24Q5JXM2 366 aa26.62■■□□□ 1.85
R3HDM4-206ENST00000590454 ZNF609O15014 1411 aa26.62■■□□□ 1.85
R3HDM4-206ENST00000590454 PITPNM2Q9BZ72 1349 aa26.62■■□□□ 1.85
R3HDM4-206ENST00000590454 TXNRD3Q86VQ6 643 aa26.61■■□□□ 1.85
R3HDM4-206ENST00000590454 MYOZ2Q9NPC6 264 aa26.61■■□□□ 1.85
R3HDM4-206ENST00000590454 ZNF804BA4D1E1 1349 aa26.61■■□□□ 1.85
R3HDM4-206ENST00000590454 PDE4DIPQ5VU43 2346 aa26.6■■□□□ 1.85
R3HDM4-206ENST00000590454 USP17L8P0C7I0 530 aa26.6■■□□□ 1.85
R3HDM4-206ENST00000590454 LEMD3Q9Y2U8 911 aa26.6■■□□□ 1.85
R3HDM4-206ENST00000590454 SURF6O75683 361 aaKnown RBP26.59■■□□□ 1.85
R3HDM4-206ENST00000590454 GMLQ99445 158 aa26.59■■□□□ 1.85
R3HDM4-206ENST00000590454 FBXO3Q9UK99 471 aa26.59■■□□□ 1.85
R3HDM4-206ENST00000590454 IRS2Q9Y4H2 1338 aa26.59■■□□□ 1.85
R3HDM4-206ENST00000590454 IL15P40933 162 aaPredicted RBP26.58■■□□□ 1.85
R3HDM4-206ENST00000590454 KCNJ4P48050 445 aa26.58■■□□□ 1.85
R3HDM4-206ENST00000590454 ZNF296Q8WUU4 475 aaPredicted RBP26.58■■□□□ 1.85
R3HDM4-206ENST00000590454 NOP58Q9Y2X3 529 aaKnown RBP26.58■■□□□ 1.85
R3HDM4-206ENST00000590454 SCN9AQ15858 1988 aa26.57■■□□□ 1.84
R3HDM4-206ENST00000590454 PAPPA2Q9BXP8 1791 aa26.57■■□□□ 1.84
R3HDM4-206ENST00000590454 PDE8BO95263 885 aa26.57■■□□□ 1.84
R3HDM4-206ENST00000590454 TBC1D8O95759 1140 aa26.57■■□□□ 1.84
R3HDM4-206ENST00000590454 TFCP2Q12800 502 aa26.57■■□□□ 1.84
R3HDM4-206ENST00000590454 PODNQ7Z5L7 613 aa26.57■■□□□ 1.84
R3HDM4-206ENST00000590454 EXOC6BQ9Y2D4 811 aa26.57■■□□□ 1.84
R3HDM4-206ENST00000590454 USP17L3A6NCW0 530 aa26.56■■□□□ 1.84
R3HDM4-206ENST00000590454 USP17L4A6NCW7 530 aa26.56■■□□□ 1.84
R3HDM4-206ENST00000590454 UBE2Q2LH0YL09 131 aa26.56■■□□□ 1.84
R3HDM4-206ENST00000590454 SASH1O94885 1247 aa26.56■■□□□ 1.84
R3HDM4-206ENST00000590454 G3BP1Q13283 466 aaKnown RBP eCLIP26.56■■□□□ 1.84
R3HDM4-206ENST00000590454 MOB2Q70IA6 237 aa26.56■■□□□ 1.84
R3HDM4-206ENST00000590454 USP17L1Q7RTZ2 530 aa26.56■■□□□ 1.84
R3HDM4-206ENST00000590454 TM4SF4P48230 202 aa26.55■■□□□ 1.84
R3HDM4-206ENST00000590454 CEP126Q9P2H0 1117 aa26.55■■□□□ 1.84
R3HDM4-206ENST00000590454 MED23Q9ULK4 1368 aa26.55■■□□□ 1.84
R3HDM4-206ENST00000590454 FGFR2P21802 821 aa26.54■■□□□ 1.84
R3HDM4-206ENST00000590454 UBE4AQ14139 1066 aa26.54■■□□□ 1.84
R3HDM4-206ENST00000590454 NOM1Q5C9Z4 860 aaKnown RBP26.54■■□□□ 1.84
R3HDM4-206ENST00000590454 HMMRO75330 724 aa26.53■■□□□ 1.84
R3HDM4-206ENST00000590454 TTLL12Q14166 644 aaPredicted RBP26.53■■□□□ 1.84
R3HDM4-206ENST00000590454 SCAF8Q9UPN6 1271 aaKnown RBP26.53■■□□□ 1.84
R3HDM4-206ENST00000590454 GPR25O00155 361 aa26.52■■□□□ 1.84
R3HDM4-206ENST00000590454 OS9Q13438 667 aaPredicted RBP26.52■■□□□ 1.84
R3HDM4-206ENST00000590454 PUM3Q15397 648 aaKnown RBP26.52■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms