RNA–Protein interactions for RNA: ENST00000590239.5

DDX39A-211, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 565 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-211ENST00000590239 DCAF8Q5TAQ9 597 aa18.4■□□□□ 0.54
DDX39A-211ENST00000590239 PI16Q6UXB8 463 aa18.4■□□□□ 0.54
DDX39A-211ENST00000590239 PODNQ7Z5L7 613 aa18.4■□□□□ 0.54
DDX39A-211ENST00000590239 KBTBD3Q8NAB2 608 aa18.4■□□□□ 0.54
DDX39A-211ENST00000590239 ZNF784Q8NCA9 323 aaPredicted RBP18.4■□□□□ 0.54
DDX39A-211ENST00000590239 IQSEC3Q9UPP2 1182 aaPredicted RBP18.4■□□□□ 0.54
DDX39A-211ENST00000590239 PPIP5K2O43314 1243 aa18.39■□□□□ 0.53
DDX39A-211ENST00000590239 CDC45O75419 566 aa18.39■□□□□ 0.53
DDX39A-211ENST00000590239 CYP2E1P05181 493 aaPredicted RBP18.39■□□□□ 0.53
DDX39A-211ENST00000590239 AOC3Q16853 763 aa18.39■□□□□ 0.53
DDX39A-211ENST00000590239 WDR66Q8TBY9 1149 aa18.39■□□□□ 0.53
DDX39A-211ENST00000590239 EDC3Q96F86 508 aaKnown RBP18.39■□□□□ 0.53
DDX39A-211ENST00000590239 NDUFB9Q9Y6M9 179 aa18.39■□□□□ 0.53
DDX39A-211ENST00000590239 RFX7Q2KHR2 1363 aa18.39■□□□□ 0.53
DDX39A-211ENST00000590239 COL1A1P02452 1464 aaPredicted RBP18.39■□□□□ 0.53
DDX39A-211ENST00000590239 DOK7Q18PE1 504 aa18.38■□□□□ 0.53
DDX39A-211ENST00000590239 LRRFIP1Q32MZ4 808 aaKnown RBP18.38■□□□□ 0.53
DDX39A-211ENST00000590239 FSD1Q9BTV5 496 aa18.38■□□□□ 0.53
DDX39A-211ENST00000590239 ZNF277Q9NRM2 450 aaPredicted RBP18.38■□□□□ 0.53
DDX39A-211ENST00000590239 FAM205AQ6ZU69 1335 aa18.38■□□□□ 0.53
DDX39A-211ENST00000590239 HIP1O00291 1037 aa18.37■□□□□ 0.53
DDX39A-211ENST00000590239 IGSF3O75054 1194 aa18.37■□□□□ 0.53
DDX39A-211ENST00000590239 IARSP41252 1262 aaKnown RBP18.37■□□□□ 0.53
DDX39A-211ENST00000590239 LARGE2Q8N3Y3 721 aa18.37■□□□□ 0.53
DDX39A-211ENST00000590239 ANTXR1Q9H6X2 564 aa18.37■□□□□ 0.53
DDX39A-211ENST00000590239 PIH1D3Q9NQM4 214 aaKnown RBP18.37■□□□□ 0.53
DDX39A-211ENST00000590239 SALL1Q9NSC2 1324 aa18.37■□□□□ 0.53
DDX39A-211ENST00000590239 ECE2O60344 883 aa18.36■□□□□ 0.53
DDX39A-211ENST00000590239 C1QTNF8P60827 252 aa18.36■□□□□ 0.53
DDX39A-211ENST00000590239 CHAF1AQ13111 956 aaPredicted RBP18.36■□□□□ 0.53
DDX39A-211ENST00000590239 CASC1Q6TDU7 716 aa18.36■□□□□ 0.53
DDX39A-211ENST00000590239 ZGPATQ8N5A5 531 aaKnown RBP18.36■□□□□ 0.53
DDX39A-211ENST00000590239 TBC1D22AQ8WUA7 517 aa18.36■□□□□ 0.53
DDX39A-211ENST00000590239 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.36■□□□□ 0.534e-20■□□□□ 10.4
DDX39A-211ENST00000590239 AK9Q5TCS8 1911 aa18.35■□□□□ 0.53
DDX39A-211ENST00000590239 MYH13Q9UKX3 1938 aa18.35■□□□□ 0.53
DDX39A-211ENST00000590239 ZFYP08048 801 aaPredicted RBP18.35■□□□□ 0.53
DDX39A-211ENST00000590239 CHMLP26374 656 aa18.35■□□□□ 0.53
DDX39A-211ENST00000590239 SPTY2D1Q68D10 685 aaPredicted RBP18.35■□□□□ 0.53
DDX39A-211ENST00000590239 ZSCAN25Q6NSZ9 544 aa18.35■□□□□ 0.53
DDX39A-211ENST00000590239 TMED8Q6PL24 325 aaPredicted RBP18.35■□□□□ 0.53
DDX39A-211ENST00000590239 TBC1D9Q6ZT07 1266 aa18.35■□□□□ 0.53
DDX39A-211ENST00000590239 ARHGAP27Q6ZUM4 889 aa18.35■□□□□ 0.53
DDX39A-211ENST00000590239 DBNDD1Q9H9R9 158 aa18.35■□□□□ 0.53
DDX39A-211ENST00000590239 DCAF8L1A6NGE4 600 aa18.34■□□□□ 0.53
DDX39A-211ENST00000590239 YBX3P16989 372 aaKnown RBP eCLIP18.34■□□□□ 0.53
DDX39A-211ENST00000590239 MAP3K12Q12852 859 aa18.34■□□□□ 0.53
DDX39A-211ENST00000590239 C8orf34Q49A92 452 aa18.34■□□□□ 0.53
DDX39A-211ENST00000590239 NIM1KQ8IY84 436 aa18.34■□□□□ 0.53
DDX39A-211ENST00000590239 DIAPH3Q9NSV4 1193 aa18.34■□□□□ 0.53
DDX39A-211ENST00000590239 LRP2BPQ9P2M1 347 aa18.34■□□□□ 0.53
DDX39A-211ENST00000590239 ZNRF3Q9ULT6 936 aa18.34■□□□□ 0.53
DDX39A-211ENST00000590239 IDH1O75874 414 aaKnown RBP18.33■□□□□ 0.52
DDX39A-211ENST00000590239 FKBP1AP62942 108 aaKnown RBP18.33■□□□□ 0.52
DDX39A-211ENST00000590239 GTF2IP78347 998 aa18.33■□□□□ 0.52
DDX39A-211ENST00000590239 STRIP1Q5VSL9 837 aa18.33■□□□□ 0.52
DDX39A-211ENST00000590239 TTLL5Q6EMB2 1281 aa18.33■□□□□ 0.52
DDX39A-211ENST00000590239 USP17L3A6NCW0 530 aa18.32■□□□□ 0.52
DDX39A-211ENST00000590239 USP17L4A6NCW7 530 aa18.32■□□□□ 0.52
DDX39A-211ENST00000590239 RNF113AO15541 343 aaKnown RBP18.32■□□□□ 0.52
DDX39A-211ENST00000590239 EIF5BO60841 1220 aaKnown RBP18.32■□□□□ 0.52
DDX39A-211ENST00000590239 RASSF7Q02833 373 aa18.32■□□□□ 0.52
DDX39A-211ENST00000590239 ERICH6Q7L0X2 663 aa18.32■□□□□ 0.52
DDX39A-211ENST00000590239 USP17L1Q7RTZ2 530 aa18.32■□□□□ 0.52
DDX39A-211ENST00000590239 RUFY2Q8WXA3 655 aa18.32■□□□□ 0.52
DDX39A-211ENST00000590239 JDP2Q8WYK2 163 aa18.32■□□□□ 0.52
DDX39A-211ENST00000590239 ABCF2Q9UG63 623 aa18.32■□□□□ 0.52
DDX39A-211ENST00000590239 SUGT1Q9Y2Z0 365 aa18.32■□□□□ 0.52
DDX39A-211ENST00000590239 DOCK2Q92608 1830 aa18.32■□□□□ 0.52
DDX39A-211ENST00000590239 COL4A5P29400 1685 aa18.31■□□□□ 0.52
DDX39A-211ENST00000590239 CHD4Q14839 1912 aa18.31■□□□□ 0.52
DDX39A-211ENST00000590239 YDJCA8MPS7 323 aa18.31■□□□□ 0.52
DDX39A-211ENST00000590239 LMNB1P20700 586 aa18.31■□□□□ 0.52
DDX39A-211ENST00000590239 UBE3CQ15386 1083 aa18.31■□□□□ 0.52
DDX39A-211ENST00000590239 SLC9C2Q5TAH2 1124 aa18.31■□□□□ 0.52
DDX39A-211ENST00000590239 JAG2Q9Y219 1238 aa18.31■□□□□ 0.52
DDX39A-211ENST00000590239 LDHBP07195 334 aaKnown RBP18.3■□□□□ 0.52
DDX39A-211ENST00000590239 PDE6AP16499 860 aa18.3■□□□□ 0.52
DDX39A-211ENST00000590239 ADD2P35612 726 aa18.3■□□□□ 0.52
DDX39A-211ENST00000590239 GPR162Q16538 588 aa18.3■□□□□ 0.52
DDX39A-211ENST00000590239 MFSD14BQ5SR56 506 aa18.3■□□□□ 0.52
DDX39A-211ENST00000590239 DACT2Q5SW24 774 aa18.3■□□□□ 0.52
DDX39A-211ENST00000590239 BACH2Q9BYV9 841 aa18.3■□□□□ 0.52
DDX39A-211ENST00000590239 RAI14Q9P0K7 980 aa18.3■□□□□ 0.52
DDX39A-211ENST00000590239 GRIN3BO60391 1043 aa18.29■□□□□ 0.52
DDX39A-211ENST00000590239 PRELPP51888 382 aa18.29■□□□□ 0.52
DDX39A-211ENST00000590239 NMIQ13287 307 aaPredicted RBP18.29■□□□□ 0.52
DDX39A-211ENST00000590239 ZMYM1Q5SVZ6 1142 aa18.29■□□□□ 0.52
DDX39A-211ENST00000590239 FBXW7Q969H0 707 aa18.29■□□□□ 0.52
DDX39A-211ENST00000590239 ESYT1Q9BSJ8 1104 aa18.29■□□□□ 0.52
DDX39A-211ENST00000590239 KCNQ5Q9NR82 932 aa18.29■□□□□ 0.52
DDX39A-211ENST00000590239 HELLSQ9NRZ9 838 aa18.29■□□□□ 0.52
DDX39A-211ENST00000590239 RAD50Q92878 1312 aa18.28■□□□□ 0.52
DDX39A-211ENST00000590239 SCN9AQ15858 1988 aa18.28■□□□□ 0.52
DDX39A-211ENST00000590239 MYH7P12883 1935 aa18.28■□□□□ 0.52
DDX39A-211ENST00000590239 TCRBV5S4A2TA0A5A2 114 aa18.28■□□□□ 0.52
DDX39A-211ENST00000590239 PRDX5P30044 214 aa18.28■□□□□ 0.52
DDX39A-211ENST00000590239 MECOMQ03112 1051 aa18.28■□□□□ 0.52
DDX39A-211ENST00000590239 CWC27Q6UX04 472 aaKnown RBP18.28■□□□□ 0.52
DDX39A-211ENST00000590239 MAGEB6Q8N7X4 407 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms