RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 SLC5A1P13866 664 aa22.53■■□□□ 1.2
PRKCSH-209ENST00000589838 CRKLP46109 303 aaKnown RBP22.53■■□□□ 1.2
PRKCSH-209ENST00000589838 SLC9C2Q5TAH2 1124 aa22.53■■□□□ 1.2
PRKCSH-209ENST00000589838 CCDC102BQ68D86 513 aa22.53■■□□□ 1.2
PRKCSH-209ENST00000589838 MYH15Q9Y2K3 1946 aa22.52■■□□□ 1.2
PRKCSH-209ENST00000589838 A0A0G2JLW4 131 aa22.52■■□□□ 1.2
PRKCSH-209ENST00000589838 FOXP2O15409 715 aa22.52■■□□□ 1.2
PRKCSH-209ENST00000589838 CTDNEP1O95476 244 aa22.52■■□□□ 1.2
PRKCSH-209ENST00000589838 CCT2P78371 535 aaKnown RBP22.52■■□□□ 1.2
PRKCSH-209ENST00000589838 MAP3K11Q16584 847 aa22.52■■□□□ 1.2
PRKCSH-209ENST00000589838 PI16Q6UXB8 463 aa22.52■■□□□ 1.2
PRKCSH-209ENST00000589838 SMARCC1Q92922 1105 aaPredicted RBP22.52■■□□□ 1.2
PRKCSH-209ENST00000589838 LOC102724428A0A0B4J2F2 783 aa22.51■■□□□ 1.19
PRKCSH-209ENST00000589838 FGFR2P21802 821 aa22.51■■□□□ 1.19
PRKCSH-209ENST00000589838 SIK1P57059 783 aa22.51■■□□□ 1.19
PRKCSH-209ENST00000589838 SUSD4Q5VX71 490 aa22.51■■□□□ 1.19
PRKCSH-209ENST00000589838 MPHOSPH8Q99549 860 aa22.51■■□□□ 1.19
PRKCSH-209ENST00000589838 SALL1Q9NSC2 1324 aa22.51■■□□□ 1.19
PRKCSH-209ENST00000589838 A0A0G2JS52 829 aa22.51■■□□□ 1.19
PRKCSH-209ENST00000589838 PRC1O43663 620 aa22.51■■□□□ 1.19
PRKCSH-209ENST00000589838 HCLS1P14317 486 aaPredicted RBP22.51■■□□□ 1.19
PRKCSH-209ENST00000589838 TRDNQ13061 729 aa22.51■■□□□ 1.19
PRKCSH-209ENST00000589838 MB21D2Q8IYB1 491 aaPredicted RBP22.51■■□□□ 1.19
PRKCSH-209ENST00000589838 ZNF396Q96N95 335 aaPredicted RBP22.51■■□□□ 1.19
PRKCSH-209ENST00000589838 SPATA31A5Q5VU36 1347 aa22.5■■□□□ 1.19
PRKCSH-209ENST00000589838 SPATA31A7Q8IWB4 1347 aa22.5■■□□□ 1.19
PRKCSH-209ENST00000589838 HAND2P61296 217 aa22.5■■□□□ 1.19
PRKCSH-209ENST00000589838 CCDC152Q4G0S7 254 aa22.5■■□□□ 1.19
PRKCSH-209ENST00000589838 BARGINQ6ZT62 677 aa22.5■■□□□ 1.19
PRKCSH-209ENST00000589838 IDH1O75874 414 aaKnown RBP22.49■■□□□ 1.19
PRKCSH-209ENST00000589838 PTMAP06454 111 aaKnown RBP22.49■■□□□ 1.19
PRKCSH-209ENST00000589838 PHKA1P46020 1223 aa22.49■■□□□ 1.19
PRKCSH-209ENST00000589838 CHST3Q7LGC8 479 aa22.49■■□□□ 1.19
PRKCSH-209ENST00000589838 MARCH10Q8NA82 808 aaPredicted RBP22.49■■□□□ 1.19
PRKCSH-209ENST00000589838 PIH1D3Q9NQM4 214 aaKnown RBP22.49■■□□□ 1.19
PRKCSH-209ENST00000589838 ZKSCAN5Q9Y2L8 839 aa22.49■■□□□ 1.19
PRKCSH-209ENST00000589838 RTL9Q8NET4 1388 aa22.49■■□□□ 1.19
PRKCSH-209ENST00000589838 CAMTA2O94983 1202 aa22.49■■□□□ 1.19
PRKCSH-209ENST00000589838 LIG1P18858 919 aa22.49■■□□□ 1.19
PRKCSH-209ENST00000589838 ACSBG1Q96GR2 724 aa22.49■■□□□ 1.19
PRKCSH-209ENST00000589838 TNMDQ9H2S6 317 aa22.49■■□□□ 1.19
PRKCSH-209ENST00000589838 NCOA5Q9HCD5 579 aaKnown RBP22.48■■□□□ 1.19
PRKCSH-209ENST00000589838 ZNF652Q9Y2D9 606 aa22.48■■□□□ 1.19
PRKCSH-209ENST00000589838 ZNF500O60304 480 aaPredicted RBP22.47■■□□□ 1.19
PRKCSH-209ENST00000589838 PDE6AP16499 860 aa22.47■■□□□ 1.19
PRKCSH-209ENST00000589838 IGHMBP2P38935 993 aaKnown RBP22.47■■□□□ 1.19
PRKCSH-209ENST00000589838 BICD2Q8TD16 824 aa22.47■■□□□ 1.19
PRKCSH-209ENST00000589838 ZNF532Q9HCE3 1301 aa22.47■■□□□ 1.19
PRKCSH-209ENST00000589838 LAMB2P55268 1798 aa22.47■■□□□ 1.19
PRKCSH-209ENST00000589838 KDM4AO75164 1064 aa22.47■■□□□ 1.19
PRKCSH-209ENST00000589838 ALX1Q15699 326 aa22.47■■□□□ 1.19
PRKCSH-209ENST00000589838 RGS22Q8NE09 1264 aa22.47■■□□□ 1.19
PRKCSH-209ENST00000589838 DACT1Q9NYF0 836 aa22.47■■□□□ 1.19
PRKCSH-209ENST00000589838 RCOR1Q9UKL0 485 aa22.47■■□□□ 1.19
PRKCSH-209ENST00000589838 SLIT2O94813 1529 aa22.46■■□□□ 1.19
PRKCSH-209ENST00000589838 DDX60Q8IY21 1712 aaKnown RBP22.46■■□□□ 1.19
PRKCSH-209ENST00000589838 MAP3K12Q12852 859 aa22.46■■□□□ 1.19
PRKCSH-209ENST00000589838 SPATA5Q8NB90 893 aa22.46■■□□□ 1.19
PRKCSH-209ENST00000589838 CLSTN2Q9H4D0 955 aa22.46■■□□□ 1.19
PRKCSH-209ENST00000589838 CARMIL3Q8ND23 1372 aa22.46■■□□□ 1.19
PRKCSH-209ENST00000589838 MYO5AQ9Y4I1 1855 aaKnown RBP22.46■■□□□ 1.19
PRKCSH-209ENST00000589838 KLF18A0A0U1RQI7 1052 aa22.45■■□□□ 1.19
PRKCSH-209ENST00000589838 APPP05067 770 aa22.45■■□□□ 1.19
PRKCSH-209ENST00000589838 HELBQ8NG08 1087 aaPredicted RBP22.45■■□□□ 1.19
PRKCSH-209ENST00000589838 AIDAQ96BJ3 306 aa22.45■■□□□ 1.19
PRKCSH-209ENST00000589838 NIP7Q9Y221 180 aaKnown RBP eCLIP22.45■■□□□ 1.19
PRKCSH-209ENST00000589838 ZMYM6O95789 1325 aa22.45■■□□□ 1.18
PRKCSH-209ENST00000589838 ITPK1Q13572 414 aa22.45■■□□□ 1.18
PRKCSH-209ENST00000589838 RBM43Q6ZSC3 357 aaKnown RBP22.45■■□□□ 1.18
PRKCSH-209ENST00000589838 PGBD1Q96JS3 809 aa22.45■■□□□ 1.18
PRKCSH-209ENST00000589838 NAP1L5Q96NT1 182 aaPredicted RBP22.45■■□□□ 1.18
PRKCSH-209ENST00000589838 USP25Q9UHP3 1055 aa22.45■■□□□ 1.18
PRKCSH-209ENST00000589838 LTBP4Q8N2S1 1624 aa22.44■■□□□ 1.18
PRKCSH-209ENST00000589838 TCRBV5S4A2TA0A5A2 114 aa22.44■■□□□ 1.18
PRKCSH-209ENST00000589838 GOLGA8BA8MQT2 603 aa22.44■■□□□ 1.18
PRKCSH-209ENST00000589838 CPLX1O14810 134 aa22.44■■□□□ 1.18
PRKCSH-209ENST00000589838 ADD1P35611 737 aaKnown RBP22.44■■□□□ 1.18
PRKCSH-209ENST00000589838 DOCK2Q92608 1830 aa22.44■■□□□ 1.18
PRKCSH-209ENST00000589838 FAM177BA6PVY3 158 aa22.43■■□□□ 1.18
PRKCSH-209ENST00000589838 ADCY5O95622 1261 aa22.43■■□□□ 1.18
PRKCSH-209ENST00000589838 NTSR2O95665 410 aa22.43■■□□□ 1.18
PRKCSH-209ENST00000589838 ANTXR2P58335 489 aa22.43■■□□□ 1.18
PRKCSH-209ENST00000589838 STRBPQ96SI9 672 aaKnown RBP22.43■■□□□ 1.18
PRKCSH-209ENST00000589838 MYH14Q7Z406 1995 aaKnown RBP22.43■■□□□ 1.18
PRKCSH-209ENST00000589838 ZNF831Q5JPB2 1677 aa22.43■■□□□ 1.18
PRKCSH-209ENST00000589838 PATL2C9JE40 543 aaKnown RBP22.43■■□□□ 1.18
PRKCSH-209ENST00000589838 TYRO3Q06418 890 aa22.43■■□□□ 1.18
PRKCSH-209ENST00000589838 CLEC4GQ6UXB4 293 aa22.43■■□□□ 1.18
PRKCSH-209ENST00000589838 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.43■■□□□ 1.18
PRKCSH-209ENST00000589838 FAM200AQ8TCP9 573 aa22.43■■□□□ 1.18
PRKCSH-209ENST00000589838 CAMK4Q16566 473 aa22.42■■□□□ 1.18
PRKCSH-209ENST00000589838 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.42■■□□□ 1.18
PRKCSH-209ENST00000589838 WWC3Q9ULE0 1092 aa22.42■■□□□ 1.18
PRKCSH-209ENST00000589838 NUTM2BA6NNL0 878 aaPredicted RBP22.41■■□□□ 1.18
PRKCSH-209ENST00000589838 NUTM2EB1AL46 878 aaPredicted RBP22.41■■□□□ 1.18
PRKCSH-209ENST00000589838 CTAGE5O15320 804 aa22.41■■□□□ 1.18
PRKCSH-209ENST00000589838 OFD1O75665 1012 aa22.41■■□□□ 1.18
PRKCSH-209ENST00000589838 CAVIN2O95810 425 aa22.41■■□□□ 1.18
PRKCSH-209ENST00000589838 FDPSP14324 419 aaKnown RBP22.41■■□□□ 1.18
PRKCSH-209ENST00000589838 FOSBP53539 338 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms