RNA–Protein interactions for RNA: ENST00000589663.5

BECN1-212, Transcript of beclin 1, humanhuman

TSL 3

Gene BECN1, Length 489 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BECN1-212ENST00000589663 SIK1P57059 783 aa11.85□□□□□ -0.51
BECN1-212ENST00000589663 NECTIN1Q15223 517 aa11.85□□□□□ -0.51
BECN1-212ENST00000589663 VPS72Q15906 364 aa11.85□□□□□ -0.51
BECN1-212ENST00000589663 HLFQ16534 295 aa11.85□□□□□ -0.51
BECN1-212ENST00000589663 LRRC24Q50LG9 513 aa11.85□□□□□ -0.51
BECN1-212ENST00000589663 METTL24Q5JXM2 366 aa11.85□□□□□ -0.51
BECN1-212ENST00000589663 TYW1BQ6NUM6 668 aa11.85□□□□□ -0.51
BECN1-212ENST00000589663 BLOC1S2Q6QNY1 142 aa11.85□□□□□ -0.51
BECN1-212ENST00000589663 ZGPATQ8N5A5 531 aaKnown RBP11.85□□□□□ -0.51
BECN1-212ENST00000589663 NGLY1Q96IV0 654 aa11.85□□□□□ -0.51
BECN1-212ENST00000589663 ZNF594Q96JF6 807 aaPredicted RBP11.85□□□□□ -0.51
BECN1-212ENST00000589663 TTC14Q96N46 770 aa11.85□□□□□ -0.51
BECN1-212ENST00000589663 DCBLD2Q96PD2 775 aa11.85□□□□□ -0.51
BECN1-212ENST00000589663 SLC4A9Q96Q91 983 aa11.85□□□□□ -0.51
BECN1-212ENST00000589663 ZSWIM6Q9HCJ5 1215 aa11.85□□□□□ -0.51
BECN1-212ENST00000589663 CNNM1Q9NRU3 951 aa11.85□□□□□ -0.51
BECN1-212ENST00000589663 POLR3EQ9NVU0 708 aa11.85□□□□□ -0.51
BECN1-212ENST00000589663 WDR33Q9C0J8 1336 aaKnown RBP11.85□□□□□ -0.51
BECN1-212ENST00000589663 ARAP2Q8WZ64 1704 aa11.84□□□□□ -0.51
BECN1-212ENST00000589663 GOLIM4O00461 696 aa11.84□□□□□ -0.51
BECN1-212ENST00000589663 ZFYP08048 801 aaPredicted RBP11.84□□□□□ -0.51
BECN1-212ENST00000589663 PDIA4P13667 645 aaKnown RBP11.84□□□□□ -0.51
BECN1-212ENST00000589663 EIF5P55010 431 aaKnown RBP11.84□□□□□ -0.51
BECN1-212ENST00000589663 ATP2B3Q16720 1220 aa11.84□□□□□ -0.51
BECN1-212ENST00000589663 LDHAL6AQ6ZMR3 332 aa11.84□□□□□ -0.51
BECN1-212ENST00000589663 DDX46Q7L014 1031 aaKnown RBP11.84□□□□□ -0.51
BECN1-212ENST00000589663 RUFY3Q7L099 469 aa11.84□□□□□ -0.51
BECN1-212ENST00000589663 ZNF34Q8IZ26 560 aa11.84□□□□□ -0.51
BECN1-212ENST00000589663 TBC1D2BQ9UPU7 963 aa11.84□□□□□ -0.51
BECN1-212ENST00000589663 SPATA31A6Q5VVP1 1343 aa11.84□□□□□ -0.51
BECN1-212ENST00000589663 LRP5O75197 1615 aa11.83□□□□□ -0.52
BECN1-212ENST00000589663 RPAP1Q9BWH6 1393 aaPredicted RBP11.83□□□□□ -0.52
BECN1-212ENST00000589663 GOLGA6L3A6NEY3 463 aa11.83□□□□□ -0.52
BECN1-212ENST00000589663 ITGA6P23229 1130 aa11.83□□□□□ -0.52
BECN1-212ENST00000589663 TIMM10P62072 90 aa11.83□□□□□ -0.52
BECN1-212ENST00000589663 MCTP1Q6DN14 999 aa11.83□□□□□ -0.52
BECN1-212ENST00000589663 ZSCAN25Q6NSZ9 544 aa11.83□□□□□ -0.52
BECN1-212ENST00000589663 TTLL11Q8NHH1 800 aa11.83□□□□□ -0.52
BECN1-212ENST00000589663 SLC39A7Q92504 469 aa11.83□□□□□ -0.52
BECN1-212ENST00000589663 UTP14AQ9BVJ6 771 aaKnown RBP11.83□□□□□ -0.52
BECN1-212ENST00000589663 PUS3Q9BZE2 481 aaKnown RBP11.83□□□□□ -0.52
BECN1-212ENST00000589663 FAM217BQ9NTX9 383 aaPredicted RBP11.83□□□□□ -0.52
BECN1-212ENST00000589663 SMC3Q9UQE7 1217 aa11.83□□□□□ -0.52
BECN1-212ENST00000589663 RNF113AO15541 343 aaKnown RBP11.82□□□□□ -0.52
BECN1-212ENST00000589663 TAF5LO75529 589 aa11.82□□□□□ -0.52
BECN1-212ENST00000589663 HMGB1P09429 215 aaKnown RBP11.82□□□□□ -0.52
BECN1-212ENST00000589663 TTF1Q15361 905 aaPredicted RBP11.82□□□□□ -0.52
BECN1-212ENST00000589663 TSGA10IPQ3SY00 556 aa11.82□□□□□ -0.52
BECN1-212ENST00000589663 INTS5Q6P9B9 1019 aaKnown RBP11.82□□□□□ -0.52
BECN1-212ENST00000589663 PADI6Q6TGC4 694 aa11.82□□□□□ -0.52
BECN1-212ENST00000589663 METTL3Q86U44 580 aaKnown RBP11.82□□□□□ -0.52
BECN1-212ENST00000589663 EDC3Q96F86 508 aaKnown RBP11.82□□□□□ -0.52
BECN1-212ENST00000589663 C8orf37Q96NL8 207 aa11.82□□□□□ -0.52
BECN1-212ENST00000589663 DSCC1Q9BVC3 393 aa11.82□□□□□ -0.52
BECN1-212ENST00000589663 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.82□□□□□ -0.52
BECN1-212ENST00000589663 ALDH8A1Q9H2A2 487 aaPredicted RBP11.82□□□□□ -0.52
BECN1-212ENST00000589663 PCDHGA4Q9Y5G9 962 aa11.82□□□□□ -0.52
BECN1-212ENST00000589663 RIC1Q4ADV7 1423 aa11.82□□□□□ -0.52
BECN1-212ENST00000589663 MROH5Q6ZUA9 1318 aa11.82□□□□□ -0.52
BECN1-212ENST00000589663 NHSQ6T4R5 1651 aa11.81□□□□□ -0.52
BECN1-212ENST00000589663 BRD1O95696 1058 aa11.81□□□□□ -0.52
BECN1-212ENST00000589663 UQCRFS1P1P0C7P4 283 aa11.81□□□□□ -0.52
BECN1-212ENST00000589663 NCLP19338 710 aaKnown RBP11.81□□□□□ -0.52
BECN1-212ENST00000589663 FAM98CQ17RN3 349 aaKnown RBP11.81□□□□□ -0.52
BECN1-212ENST00000589663 CCDC152Q4G0S7 254 aa11.81□□□□□ -0.52
BECN1-212ENST00000589663 ZMYM1Q5SVZ6 1142 aa11.81□□□□□ -0.52
BECN1-212ENST00000589663 USPL1Q5W0Q7 1092 aa11.81□□□□□ -0.52
BECN1-212ENST00000589663 CHMP4CQ96CF2 233 aa11.81□□□□□ -0.52
BECN1-212ENST00000589663 XAGE2Q96GT9 111 aa11.81□□□□□ -0.52
BECN1-212ENST00000589663 POM121Q96HA1 1249 aa11.81□□□□□ -0.52
BECN1-212ENST00000589663 CCDC85AQ96PX6 553 aaPredicted RBP11.81□□□□□ -0.52
BECN1-212ENST00000589663 GREM2Q9H772 168 aa11.81□□□□□ -0.52
BECN1-212ENST00000589663 ATP6V1DQ9Y5K8 247 aa11.81□□□□□ -0.52
BECN1-212ENST00000589663 DDX49Q9Y6V7 483 aaKnown RBP11.81□□□□□ -0.52
BECN1-212ENST00000589663 SCN7AQ01118 1682 aa11.81□□□□□ -0.52
BECN1-212ENST00000589663 DDX60Q8IY21 1712 aaKnown RBP11.8□□□□□ -0.52
BECN1-212ENST00000589663 MYH14Q7Z406 1995 aaKnown RBP11.8□□□□□ -0.52
BECN1-212ENST00000589663 CAMTA2O94983 1202 aa11.8□□□□□ -0.52
BECN1-212ENST00000589663 SLC5A1P13866 664 aa11.8□□□□□ -0.52
BECN1-212ENST00000589663 RPS6KB1P23443 525 aa11.8□□□□□ -0.52
BECN1-212ENST00000589663 IGHMBP2P38935 993 aaKnown RBP11.8□□□□□ -0.52
BECN1-212ENST00000589663 KLHL40Q2TBA0 621 aa11.8□□□□□ -0.52
BECN1-212ENST00000589663 ZNF589Q86UQ0 364 aaPredicted RBP11.8□□□□□ -0.52
BECN1-212ENST00000589663 GZF1Q9H116 711 aaPredicted RBP11.8□□□□□ -0.52
BECN1-212ENST00000589663 CTNNA3Q9UI47 895 aa11.8□□□□□ -0.52
BECN1-212ENST00000589663 THSD7AQ9UPZ6 1657 aa11.8□□□□□ -0.52
BECN1-212ENST00000589663 UBN2Q6ZU65 1347 aa11.8□□□□□ -0.52
BECN1-212ENST00000589663 RTL9Q8NET4 1388 aa11.79□□□□□ -0.52
BECN1-212ENST00000589663 BTAF1O14981 1849 aa11.79□□□□□ -0.52
BECN1-212ENST00000589663 MBD3O95983 291 aa11.79□□□□□ -0.52
BECN1-212ENST00000589663 FKBP4Q02790 459 aaKnown RBP eCLIP11.79□□□□□ -0.52
BECN1-212ENST00000589663 ITPK1Q13572 414 aa11.79□□□□□ -0.52
BECN1-212ENST00000589663 PUM3Q15397 648 aaKnown RBP11.79□□□□□ -0.52
BECN1-212ENST00000589663 CSPP1Q1MSJ5 1256 aa11.79□□□□□ -0.52
BECN1-212ENST00000589663 ADCK5Q3MIX3 580 aa11.79□□□□□ -0.52
BECN1-212ENST00000589663 MEX3CQ5U5Q3 659 aaKnown RBP11.79□□□□□ -0.52
BECN1-212ENST00000589663 CLEC4GQ6UXB4 293 aa11.79□□□□□ -0.52
BECN1-212ENST00000589663 CERKQ8TCT0 537 aa11.79□□□□□ -0.52
BECN1-212ENST00000589663 ZNF512BQ96KM6 892 aaPredicted RBP11.79□□□□□ -0.52
BECN1-212ENST00000589663 NEK1Q96PY6 1258 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms