RNA–Protein interactions for RNA: ENST00000586796.1

RETREG3-204, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-204ENST00000586796 POTEJP0CG39 1038 aa26.42■■□□□ 1.82
RETREG3-204ENST00000586796 RBM26Q5T8P6 1007 aaKnown RBP26.42■■□□□ 1.82
RETREG3-204ENST00000586796 CCDC102BQ68D86 513 aa26.42■■□□□ 1.82
RETREG3-204ENST00000586796 RHPN1Q8TCX5 695 aa26.42■■□□□ 1.82
RETREG3-204ENST00000586796 GPR108Q9NPR9 543 aa26.42■■□□□ 1.82
RETREG3-204ENST00000586796 ADARB2Q9NS39 739 aaKnown RBP26.42■■□□□ 1.82
RETREG3-204ENST00000586796 CLEC11AQ9Y240 323 aa26.42■■□□□ 1.82
RETREG3-204ENST00000586796 TOMM70O94826 608 aa26.41■■□□□ 1.82
RETREG3-204ENST00000586796 KIAA0825Q8IV33 1275 aa26.41■■□□□ 1.82
RETREG3-204ENST00000586796 GMLQ99445 158 aa26.41■■□□□ 1.82
RETREG3-204ENST00000586796 CCDC8Q9H0W5 538 aaPredicted RBP26.41■■□□□ 1.82
RETREG3-204ENST00000586796 MYO3BQ8WXR4 1341 aa26.4■■□□□ 1.82
RETREG3-204ENST00000586796 F8W031 263 aaPredicted RBP26.4■■□□□ 1.82
RETREG3-204ENST00000586796 RAB11FIP3O75154 756 aa26.4■■□□□ 1.82
RETREG3-204ENST00000586796 USP17L8P0C7I0 530 aa26.4■■□□□ 1.82
RETREG3-204ENST00000586796 SAMD7Q7Z3H4 446 aa26.4■■□□□ 1.82
RETREG3-204ENST00000586796 PNMA8AQ86V59 439 aaPredicted RBP26.4■■□□□ 1.82
RETREG3-204ENST00000586796 CERS5Q8N5B7 392 aa26.4■■□□□ 1.82
RETREG3-204ENST00000586796 KIF1BPQ96EK5 621 aa26.4■■□□□ 1.82
RETREG3-204ENST00000586796 FAM205AQ6ZU69 1335 aa26.39■■□□□ 1.82
RETREG3-204ENST00000586796 PSME4Q14997 1843 aa26.39■■□□□ 1.82
RETREG3-204ENST00000586796 TBC1D10BQ4KMP7 808 aaPredicted RBP26.39■■□□□ 1.82
RETREG3-204ENST00000586796 MFSD14BQ5SR56 506 aa26.39■■□□□ 1.82
RETREG3-204ENST00000586796 EAF2Q96CJ1 260 aaPredicted RBP26.39■■□□□ 1.82
RETREG3-204ENST00000586796 DBNDD2Q9BQY9 259 aa26.39■■□□□ 1.82
RETREG3-204ENST00000586796 AAMPQ13685 434 aa26.38■■□□□ 1.81
RETREG3-204ENST00000586796 USP50Q70EL3 339 aaPredicted RBP26.38■■□□□ 1.81
RETREG3-204ENST00000586796 AACSQ86V21 672 aa26.38■■□□□ 1.81
RETREG3-204ENST00000586796 TRPM4Q8TD43 1214 aa26.38■■□□□ 1.81
RETREG3-204ENST00000586796 OGFOD1Q8N543 542 aa26.37■■□□□ 1.81
RETREG3-204ENST00000586796 DCTPP1Q9H773 170 aa26.37■■□□□ 1.81
RETREG3-204ENST00000586796 TLR7Q9NYK1 1049 aaKnown RBP26.37■■□□□ 1.81
RETREG3-204ENST00000586796 ARAP2Q8WZ64 1704 aa26.36■■□□□ 1.81
RETREG3-204ENST00000586796 EGFRP00533 1210 aa26.36■■□□□ 1.81
RETREG3-204ENST00000586796 FKBP1AP62942 108 aaKnown RBP26.36■■□□□ 1.81
RETREG3-204ENST00000586796 CLASRPQ8N2M8 674 aaKnown RBP26.36■■□□□ 1.81
RETREG3-204ENST00000586796 RBM46Q8TBY0 533 aaKnown RBP26.36■■□□□ 1.81
RETREG3-204ENST00000586796 ZNF646O15015 1829 aaPredicted RBP26.35■■□□□ 1.81
RETREG3-204ENST00000586796 SMARCA5O60264 1052 aaPredicted RBP26.35■■□□□ 1.81
RETREG3-204ENST00000586796 HIRAP54198 1017 aaPredicted RBP26.35■■□□□ 1.81
RETREG3-204ENST00000586796 ZNF280AP59817 542 aaPredicted RBP26.35■■□□□ 1.81
RETREG3-204ENST00000586796 KIF4BQ2VIQ3 1234 aa26.35■■□□□ 1.81
RETREG3-204ENST00000586796 CCDC158Q5M9N0 1113 aa26.35■■□□□ 1.81
RETREG3-204ENST00000586796 TTC39AQ5SRH9 613 aa26.35■■□□□ 1.81
RETREG3-204ENST00000586796 LDHDQ86WU2 507 aa26.35■■□□□ 1.81
RETREG3-204ENST00000586796 LRRCC1Q9C099 1032 aa26.35■■□□□ 1.81
RETREG3-204ENST00000586796 DBNLQ9UJU6 430 aaKnown RBP26.35■■□□□ 1.81
RETREG3-204ENST00000586796 HDAC9Q9UKV0 1011 aa26.35■■□□□ 1.81
RETREG3-204ENST00000586796 DENND2AQ9ULE3 1009 aa26.35■■□□□ 1.81
RETREG3-204ENST00000586796 RASGRF1Q13972 1273 aa26.34■■□□□ 1.81
RETREG3-204ENST00000586796 SMC1BQ8NDV3 1235 aa26.34■■□□□ 1.81
RETREG3-204ENST00000586796 TBC1D22AQ8WUA7 517 aa26.34■■□□□ 1.81
RETREG3-204ENST00000586796 MYOZ2Q9NPC6 264 aa26.34■■□□□ 1.81
RETREG3-204ENST00000586796 COL1A1P02452 1464 aaPredicted RBP26.34■■□□□ 1.81
RETREG3-204ENST00000586796 SEMA3EO15041 775 aa26.33■■□□□ 1.81
RETREG3-204ENST00000586796 CENPBP07199 599 aaPredicted RBP26.33■■□□□ 1.81
RETREG3-204ENST00000586796 GRIK5Q16478 980 aa26.33■■□□□ 1.81
RETREG3-204ENST00000586796 CHADLQ6NUI6 762 aa26.33■■□□□ 1.81
RETREG3-204ENST00000586796 WDR66Q8TBY9 1149 aa26.33■■□□□ 1.81
RETREG3-204ENST00000586796 IFIT2P09913 472 aaKnown RBP26.32■■□□□ 1.8
RETREG3-204ENST00000586796 MAP1SQ66K74 1059 aaPredicted RBP26.32■■□□□ 1.8
RETREG3-204ENST00000586796 TTF2Q9UNY4 1162 aaKnown RBP26.32■■□□□ 1.8
RETREG3-204ENST00000586796 UQCRFS1P1P0C7P4 283 aa26.31■■□□□ 1.8
RETREG3-204ENST00000586796 C1QTNF8P60827 252 aa26.31■■□□□ 1.8
RETREG3-204ENST00000586796 PI16Q6UXB8 463 aa26.31■■□□□ 1.8
RETREG3-204ENST00000586796 ARID4AP29374 1257 aaPredicted RBP26.3■■□□□ 1.8
RETREG3-204ENST00000586796 RBM5P52756 815 aaKnown RBP eCLIP26.3■■□□□ 1.8
RETREG3-204ENST00000586796 HDAC1Q13547 482 aaPredicted RBP26.3■■□□□ 1.8
RETREG3-204ENST00000586796 SCARF1Q14162 830 aa26.3■■□□□ 1.8
RETREG3-204ENST00000586796 HMG20BQ9P0W2 317 aa26.3■■□□□ 1.8
RETREG3-204ENST00000586796 SPATA5Q8NB90 893 aa26.29■■□□□ 1.8
RETREG3-204ENST00000586796 RWDD1Q9H446 243 aaPredicted RBP26.29■■□□□ 1.8
RETREG3-204ENST00000586796 SNRKQ9NRH2 765 aa26.29■■□□□ 1.8
RETREG3-204ENST00000586796 MCAMP43121 646 aa26.28■■□□□ 1.8
RETREG3-204ENST00000586796 ABCF2Q9UG63 623 aa26.28■■□□□ 1.8
RETREG3-204ENST00000586796 MYH13Q9UKX3 1938 aa26.27■■□□□ 1.8
RETREG3-204ENST00000586796 FSTL1Q12841 308 aa26.27■■□□□ 1.8
RETREG3-204ENST00000586796 DLGAP5Q15398 846 aa26.27■■□□□ 1.8
RETREG3-204ENST00000586796 NBPF9Q3BBW0 867 aa26.27■■□□□ 1.8
RETREG3-204ENST00000586796 CFAP100Q494V2 611 aa26.27■■□□□ 1.8
RETREG3-204ENST00000586796 PCDHAC2Q9Y5I4 1007 aa26.27■■□□□ 1.8
RETREG3-204ENST00000586796 ASTN2O75129 1339 aaPredicted RBP26.27■■□□□ 1.8
RETREG3-204ENST00000586796 IGHDP01880 384 aa26.26■■□□□ 1.79
RETREG3-204ENST00000586796 MMP14P50281 582 aa26.26■■□□□ 1.79
RETREG3-204ENST00000586796 CNTROBQ8N137 903 aa26.26■■□□□ 1.79
RETREG3-204ENST00000586796 ADAMTSL1Q8N6G6 1762 aa26.25■■□□□ 1.79
RETREG3-204ENST00000586796 LDHBP07195 334 aaKnown RBP26.25■■□□□ 1.79
RETREG3-204ENST00000586796 PRDX5P30044 214 aa26.25■■□□□ 1.79
RETREG3-204ENST00000586796 TBC1D9Q6ZT07 1266 aa26.25■■□□□ 1.79
RETREG3-204ENST00000586796 ZC3H15Q8WU90 426 aaKnown RBP26.25■■□□□ 1.79
RETREG3-204ENST00000586796 PDS5AQ29RF7 1337 aaKnown RBP26.24■■□□□ 1.79
RETREG3-204ENST00000586796 SALL1Q9NSC2 1324 aa26.24■■□□□ 1.79
RETREG3-204ENST00000586796 WNT10BO00744 389 aa26.24■■□□□ 1.79
RETREG3-204ENST00000586796 CRKP46108 304 aa26.24■■□□□ 1.79
RETREG3-204ENST00000586796 ANKRD45Q5TZF3 282 aa26.24■■□□□ 1.79
RETREG3-204ENST00000586796 ANGEL2Q5VTE6 544 aaKnown RBP26.24■■□□□ 1.79
RETREG3-204ENST00000586796 ZGPATQ8N5A5 531 aaKnown RBP26.24■■□□□ 1.79
RETREG3-204ENST00000586796 DCPSQ96C86 337 aaKnown RBP26.24■■□□□ 1.79
RETREG3-204ENST00000586796 GCC1Q96CN9 775 aa26.24■■□□□ 1.79
RETREG3-204ENST00000586796 GGA3Q9NZ52 723 aa26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms