RNA–Protein interactions for RNA: ENST00000585953.5

RPRD1A-204, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 3

Gene RPRD1A, Length 2,357 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-204ENST00000585953 BHLHE41Q9C0J9 482 aaPredicted RBP4.3□□□□□ -1.72
RPRD1A-204ENST00000585953 EHD4Q9H223 541 aa4.3□□□□□ -1.72
RPRD1A-204ENST00000585953 RNF19AQ9NV58 838 aa4.3□□□□□ -1.72
RPRD1A-204ENST00000585953 NID1P14543 1247 aa4.29□□□□□ -1.72
RPRD1A-204ENST00000585953 GRM2Q14416 872 aa4.29□□□□□ -1.72
RPRD1A-204ENST00000585953 GDF6Q6KF10 455 aaPredicted RBP4.29□□□□□ -1.72
RPRD1A-204ENST00000585953 CCNJLQ8IV13 435 aa4.29□□□□□ -1.72
RPRD1A-204ENST00000585953 FOXD4L4Q8WXT5 416 aaPredicted RBP4.29□□□□□ -1.72
RPRD1A-204ENST00000585953 LIN7BQ9HAP6 207 aa4.29□□□□□ -1.72
RPRD1A-204ENST00000585953 HYAL3O43820 417 aaPredicted RBP4.29□□□□□ -1.72
RPRD1A-204ENST00000585953 APBA3O96018 575 aa4.29□□□□□ -1.72
RPRD1A-204ENST00000585953 MCTP1Q6DN14 999 aa4.29□□□□□ -1.72
RPRD1A-204ENST00000585953 PRPF40BQ6NWY9 871 aaKnown RBP4.29□□□□□ -1.72
RPRD1A-204ENST00000585953 GLIS3Q8NEA6 775 aa4.29□□□□□ -1.72
RPRD1A-204ENST00000585953 PLVAPQ9BX97 442 aa4.29□□□□□ -1.72
RPRD1A-204ENST00000585953 LACRTQ9GZZ8 138 aa4.29□□□□□ -1.72
RPRD1A-204ENST00000585953 METTL12A8MUP2 240 aa4.28□□□□□ -1.72
RPRD1A-204ENST00000585953 PAX4O43316 350 aa4.28□□□□□ -1.72
RPRD1A-204ENST00000585953 H2AFB1P0C5Y9 115 aa4.28□□□□□ -1.72
RPRD1A-204ENST00000585953 H2AFB2P0C5Z0 115 aa4.28□□□□□ -1.72
RPRD1A-204ENST00000585953 ZNF16P17020 682 aaPredicted RBP4.28□□□□□ -1.72
RPRD1A-204ENST00000585953 PTPRAP18433 802 aa4.28□□□□□ -1.72
RPRD1A-204ENST00000585953 GNA15P30679 374 aa4.28□□□□□ -1.72
RPRD1A-204ENST00000585953 PRRT3Q5FWE3 981 aa4.28□□□□□ -1.72
RPRD1A-204ENST00000585953 TRIM11Q96F44 468 aa4.28□□□□□ -1.72
RPRD1A-204ENST00000585953 BCO2Q9BYV7 579 aa4.28□□□□□ -1.72
RPRD1A-204ENST00000585953 ADAM19Q9H013 955 aa4.28□□□□□ -1.72
RPRD1A-204ENST00000585953 ABCB6Q9NP58 842 aa4.28□□□□□ -1.72
RPRD1A-204ENST00000585953 PARP2Q9UGN5 583 aa4.28□□□□□ -1.72
RPRD1A-204ENST00000585953 SPG7Q9UQ90 795 aa4.28□□□□□ -1.72
RPRD1A-204ENST00000585953 RBM47A0AV96 593 aaKnown RBP4.28□□□□□ -1.72
RPRD1A-204ENST00000585953 GRIA4P48058 902 aa4.28□□□□□ -1.72
RPRD1A-204ENST00000585953 ZNF326Q5BKZ1 582 aaKnown RBP4.28□□□□□ -1.72
RPRD1A-204ENST00000585953 MSL1Q68DK7 614 aa4.28□□□□□ -1.72
RPRD1A-204ENST00000585953 NXPE4Q6UWF7 544 aa4.28□□□□□ -1.72
RPRD1A-204ENST00000585953 ILDR2Q71H61 639 aa4.28□□□□□ -1.72
RPRD1A-204ENST00000585953 ASAP3Q8TDY4 903 aa4.28□□□□□ -1.72
RPRD1A-204ENST00000585953 OSBPL7Q9BZF2 842 aa4.28□□□□□ -1.72
RPRD1A-204ENST00000585953 SOX13Q9UN79 622 aa4.28□□□□□ -1.72
RPRD1A-204ENST00000585953 TRAK1Q9UPV9 953 aa4.28□□□□□ -1.72
RPRD1A-204ENST00000585953 EPHA1P21709 976 aa4.27□□□□□ -1.73
RPRD1A-204ENST00000585953 CDC27P30260 824 aa4.27□□□□□ -1.73
RPRD1A-204ENST00000585953 SPRED3Q2MJR0 410 aa4.27□□□□□ -1.73
RPRD1A-204ENST00000585953 WFDC8Q8IUA0 241 aa4.27□□□□□ -1.73
RPRD1A-204ENST00000585953 CACTIN-AS1Q8N1I8 211 aa4.27□□□□□ -1.73
RPRD1A-204ENST00000585953 IL22RA1Q8N6P7 574 aa4.27□□□□□ -1.73
RPRD1A-204ENST00000585953 BSNDQ8WZ55 320 aa4.27□□□□□ -1.73
RPRD1A-204ENST00000585953 FAM161BQ96MY7 647 aa4.27□□□□□ -1.73
RPRD1A-204ENST00000585953 FRMD6Q96NE9 622 aa4.27□□□□□ -1.73
RPRD1A-204ENST00000585953 NACC1Q96RE7 527 aa4.27□□□□□ -1.73
RPRD1A-204ENST00000585953 SH2B1Q9NRF2 756 aaPredicted RBP4.27□□□□□ -1.73
RPRD1A-204ENST00000585953 GIPC1O14908 333 aa4.27□□□□□ -1.73
RPRD1A-204ENST00000585953 DAB2P98082 770 aa4.27□□□□□ -1.73
RPRD1A-204ENST00000585953 XPCQ01831 940 aaPredicted RBP4.27□□□□□ -1.73
RPRD1A-204ENST00000585953 SRCIN1Q9C0H9 1055 aa4.27□□□□□ -1.73
RPRD1A-204ENST00000585953 MUC3BQ9H195 1237 aa4.27□□□□□ -1.73
RPRD1A-204ENST00000585953 C12orf49Q9H741 205 aa4.27□□□□□ -1.73
RPRD1A-204ENST00000585953 A0A096LPE4 126 aa4.26□□□□□ -1.73
RPRD1A-204ENST00000585953 TMEM238LA0A1B0GVL6 79 aa4.26□□□□□ -1.73
RPRD1A-204ENST00000585953 A0A1W2PPZ6 126 aa4.26□□□□□ -1.73
RPRD1A-204ENST00000585953 ITPKAP23677 461 aa4.26□□□□□ -1.73
RPRD1A-204ENST00000585953 PSMD2Q13200 908 aa4.26□□□□□ -1.73
RPRD1A-204ENST00000585953 TMC4Q7Z404 712 aa4.26□□□□□ -1.73
RPRD1A-204ENST00000585953 VN1R5Q7Z5H4 357 aa4.26□□□□□ -1.73
RPRD1A-204ENST00000585953 DMRTC2Q8IXT2 367 aaPredicted RBP4.26□□□□□ -1.73
RPRD1A-204ENST00000585953 FMNL2Q96PY5 1086 aa4.26□□□□□ -1.73
RPRD1A-204ENST00000585953 FCGRTP55899 365 aa4.26□□□□□ -1.73
RPRD1A-204ENST00000585953 C3orf58Q8NDZ4 430 aa4.26□□□□□ -1.73
RPRD1A-204ENST00000585953 PPME1Q9Y570 386 aa4.26□□□□□ -1.73
RPRD1A-204ENST00000585953 AK5Q9Y6K8 562 aa4.26□□□□□ -1.73
RPRD1A-204ENST00000585953 COL17A1Q9UMD9 1497 aaPredicted RBP4.26□□□□□ -1.73
RPRD1A-204ENST00000585953 ARID1BQ8NFD5 2236 aaPredicted RBP4.25□□□□□ -1.73
RPRD1A-204ENST00000585953 FAM177BA6PVY3 158 aa4.25□□□□□ -1.73
RPRD1A-204ENST00000585953 H3BRJ5 948 aa4.25□□□□□ -1.73
RPRD1A-204ENST00000585953 EIF4BP23588 611 aaKnown RBP4.25□□□□□ -1.73
RPRD1A-204ENST00000585953 PTPN12Q05209 780 aaKnown RBP4.25□□□□□ -1.73
RPRD1A-204ENST00000585953 TRAPPC3LQ5T215 181 aa4.25□□□□□ -1.73
RPRD1A-204ENST00000585953 TXNDC11Q6PKC3 985 aa4.25□□□□□ -1.73
RPRD1A-204ENST00000585953 ZNF576Q9H609 170 aa4.25□□□□□ -1.73
RPRD1A-204ENST00000585953 FAM8A1Q9UBU6 413 aa4.25□□□□□ -1.73
RPRD1A-204ENST00000585953 LINC01387J3KSC0 135 aa4.25□□□□□ -1.73
RPRD1A-204ENST00000585953 USP17L7P0C7H9 530 aa4.25□□□□□ -1.73
RPRD1A-204ENST00000585953 XRCC5P13010 732 aaKnown RBP4.25□□□□□ -1.73
RPRD1A-204ENST00000585953 CDC25BP30305 580 aa4.25□□□□□ -1.73
RPRD1A-204ENST00000585953 GSTT1P30711 240 aa4.25□□□□□ -1.73
RPRD1A-204ENST00000585953 CABP4P57796 275 aa4.25□□□□□ -1.73
RPRD1A-204ENST00000585953 DTHD1Q6ZMT9 781 aa4.25□□□□□ -1.73
RPRD1A-204ENST00000585953 CLEC4MQ9H2X3 399 aaPredicted RBP4.25□□□□□ -1.73
RPRD1A-204ENST00000585953 PPP4R2Q9NY27 417 aa4.25□□□□□ -1.73
RPRD1A-204ENST00000585953 A0A0A0MRY4 1105 aa4.24□□□□□ -1.73
RPRD1A-204ENST00000585953 FAM229AH3BQW9 127 aa4.24□□□□□ -1.73
RPRD1A-204ENST00000585953 SORBS3O60504 671 aa4.24□□□□□ -1.73
RPRD1A-204ENST00000585953 DEAF1O75398 565 aaPredicted RBP4.24□□□□□ -1.73
RPRD1A-204ENST00000585953 MRPL58Q14197 206 aaKnown RBP4.24□□□□□ -1.73
RPRD1A-204ENST00000585953 SETDB1Q15047 1291 aa4.24□□□□□ -1.73
RPRD1A-204ENST00000585953 DTWD1Q8N5C7 304 aa4.24□□□□□ -1.73
RPRD1A-204ENST00000585953 MRS2Q9HD23 443 aa4.24□□□□□ -1.73
RPRD1A-204ENST00000585953 UNCXA6NJT0 531 aa4.24□□□□□ -1.73
RPRD1A-204ENST00000585953 ESRRAP11474 423 aaPredicted RBP4.24□□□□□ -1.73
RPRD1A-204ENST00000585953 PCDH1Q08174 1060 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms