RNA–Protein interactions for RNA: ENST00000585828.5

ATP6V0A1-207, Transcript of ATPase H+ transporting V0 subunit a1, humanhuman

TSL 1 (best)

Gene ATP6V0A1, Length 2,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1-207ENST00000585828 COL24A1Q17RW2 1714 aa18.42■□□□□ 0.54
ATP6V0A1-207ENST00000585828 NCLP19338 710 aaKnown RBP18.41■□□□□ 0.54
ATP6V0A1-207ENST00000585828 SF3B3Q15393 1217 aaKnown RBP18.41■□□□□ 0.54
ATP6V0A1-207ENST00000585828 LARP1BQ659C4 914 aaKnown RBP18.41■□□□□ 0.54
ATP6V0A1-207ENST00000585828 SMARCC2Q8TAQ2 1214 aa18.41■□□□□ 0.54
ATP6V0A1-207ENST00000585828 MPHOSPH8Q99549 860 aa18.41■□□□□ 0.54
ATP6V0A1-207ENST00000585828 CASZ1Q86V15 1759 aa18.41■□□□□ 0.54
ATP6V0A1-207ENST00000585828 MCM5P33992 734 aa18.41■□□□□ 0.54
ATP6V0A1-207ENST00000585828 CSPP1Q1MSJ5 1256 aa18.41■□□□□ 0.54
ATP6V0A1-207ENST00000585828 WASHC4Q2M389 1173 aa18.41■□□□□ 0.54
ATP6V0A1-207ENST00000585828 PIH1D3Q9NQM4 214 aaKnown RBP18.41■□□□□ 0.54
ATP6V0A1-207ENST00000585828 SEC31BQ9NQW1 1179 aa18.41■□□□□ 0.54
ATP6V0A1-207ENST00000585828 WDR19Q8NEZ3 1342 aa18.41■□□□□ 0.54
ATP6V0A1-207ENST00000585828 TCRBV5S4A2TA0A5A2 114 aa18.4■□□□□ 0.54
ATP6V0A1-207ENST00000585828 GPAA1O43292 621 aa18.4■□□□□ 0.54
ATP6V0A1-207ENST00000585828 FGAP02671 866 aa18.4■□□□□ 0.54
ATP6V0A1-207ENST00000585828 SLC10A5Q5PT55 438 aa18.4■□□□□ 0.54
ATP6V0A1-207ENST00000585828 LY75O60449 1722 aa18.4■□□□□ 0.54
ATP6V0A1-207ENST00000585828 IGHMBP2P38935 993 aaKnown RBP18.4■□□□□ 0.54
ATP6V0A1-207ENST00000585828 IMMTQ16891 758 aaKnown RBP18.4■□□□□ 0.54
ATP6V0A1-207ENST00000585828 BRF1Q92994 677 aa18.4■□□□□ 0.54
ATP6V0A1-207ENST00000585828 SYAP1Q96A49 352 aaPredicted RBP18.4■□□□□ 0.54
ATP6V0A1-207ENST00000585828 CHMP4CQ96CF2 233 aa18.4■□□□□ 0.54
ATP6V0A1-207ENST00000585828 ZNF274Q96GC6 653 aaPredicted RBP18.4■□□□□ 0.54
ATP6V0A1-207ENST00000585828 CNPY2Q9Y2B0 182 aa18.4■□□□□ 0.54
ATP6V0A1-207ENST00000585828 A0A0G2JLW4 131 aa18.39■□□□□ 0.53
ATP6V0A1-207ENST00000585828 UBE2HP62256 183 aa18.39■□□□□ 0.53
ATP6V0A1-207ENST00000585828 LRSAM1Q6UWE0 723 aa18.39■□□□□ 0.53
ATP6V0A1-207ENST00000585828 RBM27Q9P2N5 1060 aaKnown RBP18.39■□□□□ 0.53
ATP6V0A1-207ENST00000585828 ZMYM6O95789 1325 aa18.39■□□□□ 0.53
ATP6V0A1-207ENST00000585828 GADD45BO75293 160 aaPredicted RBP18.38■□□□□ 0.53
ATP6V0A1-207ENST00000585828 RPS6KA4O75676 772 aa18.38■□□□□ 0.53
ATP6V0A1-207ENST00000585828 SCRN1Q12765 414 aa18.38■□□□□ 0.53
ATP6V0A1-207ENST00000585828 TTLL5Q6EMB2 1281 aa18.38■□□□□ 0.53
ATP6V0A1-207ENST00000585828 ALX1Q15699 326 aa18.38■□□□□ 0.53
ATP6V0A1-207ENST00000585828 SLC9C2Q5TAH2 1124 aa18.38■□□□□ 0.53
ATP6V0A1-207ENST00000585828 SPATA5Q8NB90 893 aa18.38■□□□□ 0.53
ATP6V0A1-207ENST00000585828 CDC5LQ99459 802 aaKnown RBP18.38■□□□□ 0.53
ATP6V0A1-207ENST00000585828 BCL2L12Q9HB09 334 aa18.38■□□□□ 0.53
ATP6V0A1-207ENST00000585828 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.38■□□□□ 0.53
ATP6V0A1-207ENST00000585828 USP21Q9UK80 565 aa18.38■□□□□ 0.53
ATP6V0A1-207ENST00000585828 TAF1LQ8IZX4 1826 aa18.37■□□□□ 0.53
ATP6V0A1-207ENST00000585828 PDE6AP16499 860 aa18.37■□□□□ 0.53
ATP6V0A1-207ENST00000585828 MB21D2Q8IYB1 491 aaPredicted RBP18.37■□□□□ 0.53
ATP6V0A1-207ENST00000585828 GDPD2Q9HCC8 539 aa18.37■□□□□ 0.53
ATP6V0A1-207ENST00000585828 NARFQ9UHQ1 456 aa18.37■□□□□ 0.53
ATP6V0A1-207ENST00000585828 COL4A1P02462 1669 aa18.37■□□□□ 0.53
ATP6V0A1-207ENST00000585828 SBF2Q86WG5 1849 aa18.37■□□□□ 0.53
ATP6V0A1-207ENST00000585828 CDC37L1Q7L3B6 337 aa18.37■□□□□ 0.53
ATP6V0A1-207ENST00000585828 HELBQ8NG08 1087 aaPredicted RBP18.37■□□□□ 0.53
ATP6V0A1-207ENST00000585828 ELP1O95163 1332 aa18.37■□□□□ 0.53
ATP6V0A1-207ENST00000585828 SALL1Q9NSC2 1324 aa18.37■□□□□ 0.53
ATP6V0A1-207ENST00000585828 VPS37CA5D8V6 355 aaPredicted RBP18.36■□□□□ 0.53
ATP6V0A1-207ENST00000585828 STK3Q13188 491 aa18.36■□□□□ 0.53
ATP6V0A1-207ENST00000585828 RASGRF1Q13972 1273 aa18.36■□□□□ 0.53
ATP6V0A1-207ENST00000585828 ILDR1Q86SU0 546 aaPredicted RBP18.36■□□□□ 0.53
ATP6V0A1-207ENST00000585828 NSUN7Q8NE18 718 aaKnown RBP18.36■□□□□ 0.53
ATP6V0A1-207ENST00000585828 ZMYND15Q9H091 742 aa18.36■□□□□ 0.53
ATP6V0A1-207ENST00000585828 ZKSCAN5Q9Y2L8 839 aa18.36■□□□□ 0.53
ATP6V0A1-207ENST00000585828 ZNF804BA4D1E1 1349 aa18.35■□□□□ 0.53
ATP6V0A1-207ENST00000585828 ZNF532Q9HCE3 1301 aa18.35■□□□□ 0.53
ATP6V0A1-207ENST00000585828 FAM177BA6PVY3 158 aa18.35■□□□□ 0.53
ATP6V0A1-207ENST00000585828 HMGN5P82970 282 aaKnown RBP18.35■□□□□ 0.53
ATP6V0A1-207ENST00000585828 DNM1Q05193 864 aaKnown RBP18.35■□□□□ 0.53
ATP6V0A1-207ENST00000585828 LRRC2Q9BYS8 371 aa18.35■□□□□ 0.53
ATP6V0A1-207ENST00000585828 ONECUT3O60422 494 aaPredicted RBP18.35■□□□□ 0.53
ATP6V0A1-207ENST00000585828 PHF14O94880 888 aa18.35■□□□□ 0.53
ATP6V0A1-207ENST00000585828 CHRNDQ07001 517 aa18.35■□□□□ 0.53
ATP6V0A1-207ENST00000585828 ERFEQ4G0M1 354 aa18.35■□□□□ 0.53
ATP6V0A1-207ENST00000585828 PKNOX2Q96KN3 472 aa18.35■□□□□ 0.53
ATP6V0A1-207ENST00000585828 BSDC1Q9NW68 430 aaPredicted RBP18.35■□□□□ 0.53
ATP6V0A1-207ENST00000585828 JAK2O60674 1132 aa18.34■□□□□ 0.53
ATP6V0A1-207ENST00000585828 CTDNEP1O95476 244 aa18.34■□□□□ 0.53
ATP6V0A1-207ENST00000585828 PDIA3P30101 505 aaKnown RBP18.34■□□□□ 0.53
ATP6V0A1-207ENST00000585828 FOXD4L6Q3SYB3 417 aaPredicted RBP18.34■□□□□ 0.53
ATP6V0A1-207ENST00000585828 FOXD4L3Q6VB84 417 aaPredicted RBP18.34■□□□□ 0.53
ATP6V0A1-207ENST00000585828 PTF1AQ7RTS3 328 aa18.34■□□□□ 0.53
ATP6V0A1-207ENST00000585828 STRBPQ96SI9 672 aaKnown RBP18.34■□□□□ 0.53
ATP6V0A1-207ENST00000585828 MAP7D2Q96T17 732 aa18.34■□□□□ 0.53
ATP6V0A1-207ENST00000585828 WWC3Q9ULE0 1092 aa18.34■□□□□ 0.53
ATP6V0A1-207ENST00000585828 ZNF213O14771 459 aa18.34■□□□□ 0.53
ATP6V0A1-207ENST00000585828 ZBTB22O15209 634 aa18.34■□□□□ 0.53
ATP6V0A1-207ENST00000585828 IDH1O75874 414 aaKnown RBP18.34■□□□□ 0.53
ATP6V0A1-207ENST00000585828 FGD1P98174 961 aa18.34■□□□□ 0.53
ATP6V0A1-207ENST00000585828 APOBRQ0VD83 1088 aa18.34■□□□□ 0.53
ATP6V0A1-207ENST00000585828 NCOA7Q8NI08 942 aa18.34■□□□□ 0.53
ATP6V0A1-207ENST00000585828 NYXQ9GZU5 481 aa18.34■□□□□ 0.53
ATP6V0A1-207ENST00000585828 KRT85P78386 507 aa18.33■□□□□ 0.52
ATP6V0A1-207ENST00000585828 MAP3K12Q12852 859 aa18.33■□□□□ 0.52
ATP6V0A1-207ENST00000585828 UBE4AQ14139 1066 aa18.33■□□□□ 0.52
ATP6V0A1-207ENST00000585828 NAA16Q6N069 864 aaPredicted RBP18.33■□□□□ 0.52
ATP6V0A1-207ENST00000585828 NBPF3Q9H094 633 aa18.33■□□□□ 0.52
ATP6V0A1-207ENST00000585828 CCDC39Q9UFE4 941 aa18.33■□□□□ 0.52
ATP6V0A1-207ENST00000585828 SYCE3A1L190 88 aa18.32■□□□□ 0.52
ATP6V0A1-207ENST00000585828 CCDC183Q5T5S1 534 aa18.32■□□□□ 0.52
ATP6V0A1-207ENST00000585828 TBC1D9BQ66K14 1250 aa18.32■□□□□ 0.52
ATP6V0A1-207ENST00000585828 ANKRD18AQ8IVF6 992 aa18.32■□□□□ 0.52
ATP6V0A1-207ENST00000585828 RGS22Q8NE09 1264 aa18.32■□□□□ 0.52
ATP6V0A1-207ENST00000585828 ZSCAN16Q9H4T2 348 aaPredicted RBP18.32■□□□□ 0.52
ATP6V0A1-207ENST00000585828 KIF3AQ9Y496 699 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms