RNA–Protein interactions for RNA: ENST00000583805.1

CRLF3-205, Transcript of cytokine receptor like factor 3, humanhuman

TSL 4

Gene CRLF3, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-205ENST00000583805 TTLL11Q8NHH1 800 aa11.07□□□□□ -0.64
CRLF3-205ENST00000583805 ZNF408Q9H9D4 720 aa11.07□□□□□ -0.64
CRLF3-205ENST00000583805 EMILIN3Q9NT22 766 aa11.07□□□□□ -0.64
CRLF3-205ENST00000583805 MYO3BQ8WXR4 1341 aa11.07□□□□□ -0.64
CRLF3-205ENST00000583805 PITPNM2Q9BZ72 1349 aa11.07□□□□□ -0.64
CRLF3-205ENST00000583805 SHTN1A0MZ66 631 aa11.06□□□□□ -0.64
CRLF3-205ENST00000583805 H7C1W4 665 aa11.06□□□□□ -0.64
CRLF3-205ENST00000583805 IGHMBP2P38935 993 aaKnown RBP11.06□□□□□ -0.64
CRLF3-205ENST00000583805 ZNF280AP59817 542 aaPredicted RBP11.06□□□□□ -0.64
CRLF3-205ENST00000583805 FOXK1P85037 733 aa11.06□□□□□ -0.64
CRLF3-205ENST00000583805 GRM1Q13255 1194 aa11.06□□□□□ -0.64
CRLF3-205ENST00000583805 FKBP5Q13451 457 aaPredicted RBP11.06□□□□□ -0.64
CRLF3-205ENST00000583805 DSG2Q14126 1118 aa11.06□□□□□ -0.64
CRLF3-205ENST00000583805 TBC1D10BQ4KMP7 808 aaPredicted RBP11.06□□□□□ -0.64
CRLF3-205ENST00000583805 CCDC184Q52MB2 194 aa11.06□□□□□ -0.64
CRLF3-205ENST00000583805 RSBN1LQ6PCB5 846 aaPredicted RBP11.06□□□□□ -0.64
CRLF3-205ENST00000583805 SULF1Q8IWU6 871 aa11.06□□□□□ -0.64
CRLF3-205ENST00000583805 C2orf69Q8N8R5 385 aa11.06□□□□□ -0.64
CRLF3-205ENST00000583805 CCDC85AQ96PX6 553 aaPredicted RBP11.06□□□□□ -0.64
CRLF3-205ENST00000583805 USP17L3A6NCW0 530 aa11.05□□□□□ -0.64
CRLF3-205ENST00000583805 USP17L4A6NCW7 530 aa11.05□□□□□ -0.64
CRLF3-205ENST00000583805 CCT4P50991 539 aaKnown RBP11.05□□□□□ -0.64
CRLF3-205ENST00000583805 HUNKP57058 714 aa11.05□□□□□ -0.64
CRLF3-205ENST00000583805 MAP3K9P80192 1104 aa11.05□□□□□ -0.64
CRLF3-205ENST00000583805 CWF19L2Q2TBE0 894 aaKnown RBP11.05□□□□□ -0.64
CRLF3-205ENST00000583805 USP17L1Q7RTZ2 530 aa11.05□□□□□ -0.64
CRLF3-205ENST00000583805 UBE3BQ7Z3V4 1068 aa11.05□□□□□ -0.64
CRLF3-205ENST00000583805 USP48Q86UV5 1035 aa11.05□□□□□ -0.64
CRLF3-205ENST00000583805 LINS1Q8NG48 757 aa11.05□□□□□ -0.64
CRLF3-205ENST00000583805 DNAAF4Q8WXU2 420 aa11.05□□□□□ -0.64
CRLF3-205ENST00000583805 MS4A3Q96HJ5 214 aa11.05□□□□□ -0.64
CRLF3-205ENST00000583805 ANKRD2Q9GZV1 360 aa11.05□□□□□ -0.64
CRLF3-205ENST00000583805 GREM2Q9H772 168 aa11.05□□□□□ -0.64
CRLF3-205ENST00000583805 GBA2Q9HCG7 927 aaPredicted RBP11.05□□□□□ -0.64
CRLF3-205ENST00000583805 GGA3Q9NZ52 723 aa11.05□□□□□ -0.64
CRLF3-205ENST00000583805 LEMD3Q9Y2U8 911 aa11.05□□□□□ -0.64
CRLF3-205ENST00000583805 USP17L8P0C7I0 530 aa11.04□□□□□ -0.64
CRLF3-205ENST00000583805 FKBP1BP68106 108 aa11.04□□□□□ -0.64
CRLF3-205ENST00000583805 GCKRQ14397 625 aa11.04□□□□□ -0.64
CRLF3-205ENST00000583805 G2E3Q7L622 706 aa11.04□□□□□ -0.64
CRLF3-205ENST00000583805 CCDC102AQ96A19 550 aa11.04□□□□□ -0.64
CRLF3-205ENST00000583805 MPHOSPH8Q99549 860 aa11.04□□□□□ -0.64
CRLF3-205ENST00000583805 COA1Q9GZY4 146 aa11.04□□□□□ -0.64
CRLF3-205ENST00000583805 KCNQ5Q9NR82 932 aa11.04□□□□□ -0.64
CRLF3-205ENST00000583805 MINPP1Q9UNW1 487 aa11.04□□□□□ -0.64
CRLF3-205ENST00000583805 COL1A1P02452 1464 aaPredicted RBP11.04□□□□□ -0.64
CRLF3-205ENST00000583805 AOC2O75106 756 aa11.03□□□□□ -0.64
CRLF3-205ENST00000583805 EGFRP00533 1210 aa11.03□□□□□ -0.64
CRLF3-205ENST00000583805 ITGA6P23229 1130 aa11.03□□□□□ -0.64
CRLF3-205ENST00000583805 MAP2K5Q13163 448 aa11.03□□□□□ -0.64
CRLF3-205ENST00000583805 STRIP1Q5VSL9 837 aa11.03□□□□□ -0.64
CRLF3-205ENST00000583805 RGMBQ6NW40 437 aa11.03□□□□□ -0.64
CRLF3-205ENST00000583805 OGFOD1Q8N543 542 aa11.03□□□□□ -0.64
CRLF3-205ENST00000583805 JARID2Q92833 1246 aaPredicted RBP11.03□□□□□ -0.64
CRLF3-205ENST00000583805 GMLQ99445 158 aa11.03□□□□□ -0.64
CRLF3-205ENST00000583805 MYOZ2Q9NPC6 264 aa11.03□□□□□ -0.64
CRLF3-205ENST00000583805 GRXCR2A6NFK2 248 aa11.02□□□□□ -0.65
CRLF3-205ENST00000583805 ADM5C9JUS6 153 aa11.02□□□□□ -0.65
CRLF3-205ENST00000583805 VAMP4O75379 141 aa11.02□□□□□ -0.65
CRLF3-205ENST00000583805 CSF1RP07333 972 aa11.02□□□□□ -0.65
CRLF3-205ENST00000583805 CASP7P55210 303 aa11.02□□□□□ -0.65
CRLF3-205ENST00000583805 FAM117AQ9C073 453 aa11.02□□□□□ -0.65
CRLF3-205ENST00000583805 SAGE1Q9NXZ1 904 aa11.02□□□□□ -0.65
CRLF3-205ENST00000583805 OTOFQ9HC10 1997 aa11.02□□□□□ -0.65
CRLF3-205ENST00000583805 ZNF804BA4D1E1 1349 aa11.02□□□□□ -0.65
CRLF3-205ENST00000583805 ANKRD18BA2A2Z9 1011 aa11.01□□□□□ -0.65
CRLF3-205ENST00000583805 TTLL13PA6NNM8 815 aa11.01□□□□□ -0.65
CRLF3-205ENST00000583805 SCARF1Q14162 830 aa11.01□□□□□ -0.65
CRLF3-205ENST00000583805 FAM161AQ3B820 660 aa11.01□□□□□ -0.65
CRLF3-205ENST00000583805 DACT2Q5SW24 774 aa11.01□□□□□ -0.65
CRLF3-205ENST00000583805 ANGEL2Q5VTE6 544 aaKnown RBP11.01□□□□□ -0.65
CRLF3-205ENST00000583805 CDCA5Q96FF9 252 aa11.01□□□□□ -0.65
CRLF3-205ENST00000583805 HDAC9Q9UKV0 1011 aa11.01□□□□□ -0.65
CRLF3-205ENST00000583805 IRF6O14896 467 aa11□□□□□ -0.65
CRLF3-205ENST00000583805 SLC10A3P09131 477 aa11□□□□□ -0.65
CRLF3-205ENST00000583805 KCNJ4P48050 445 aa11□□□□□ -0.65
CRLF3-205ENST00000583805 EXOSC9Q06265 439 aaKnown RBP11□□□□□ -0.65
CRLF3-205ENST00000583805 IFIT5Q13325 482 aaKnown RBP11□□□□□ -0.65
CRLF3-205ENST00000583805 PLPP6Q8IY26 295 aa11□□□□□ -0.65
CRLF3-205ENST00000583805 ABHD8Q96I13 439 aa11□□□□□ -0.65
CRLF3-205ENST00000583805 TRPC6Q9Y210 931 aa11□□□□□ -0.65
CRLF3-205ENST00000583805 FAM155AB1AL88 458 aaPredicted RBP10.99□□□□□ -0.65
CRLF3-205ENST00000583805 NF2P35240 595 aa10.99□□□□□ -0.65
CRLF3-205ENST00000583805 ZNF157P51786 506 aaPredicted RBP10.99□□□□□ -0.65
CRLF3-205ENST00000583805 CHRNDQ07001 517 aa10.99□□□□□ -0.65
CRLF3-205ENST00000583805 C15orf52Q6ZUT6 534 aaKnown RBP10.99□□□□□ -0.65
CRLF3-205ENST00000583805 APOBEC3FQ8IUX4 373 aaKnown RBP10.99□□□□□ -0.65
CRLF3-205ENST00000583805 AK9Q5TCS8 1911 aa10.99□□□□□ -0.65
CRLF3-205ENST00000583805 GRM8O00222 908 aa10.98□□□□□ -0.65
CRLF3-205ENST00000583805 WNT10BO00744 389 aa10.98□□□□□ -0.65
CRLF3-205ENST00000583805 ALDH1L1O75891 902 aa10.98□□□□□ -0.65
CRLF3-205ENST00000583805 HIC1Q14526 733 aa10.98□□□□□ -0.65
CRLF3-205ENST00000583805 AMHR2Q16671 573 aa10.98□□□□□ -0.65
CRLF3-205ENST00000583805 BEND3Q5T5X7 828 aa10.98□□□□□ -0.65
CRLF3-205ENST00000583805 TTLL5Q6EMB2 1281 aa10.98□□□□□ -0.65
CRLF3-205ENST00000583805 ZNF804AQ7Z570 1209 aa10.98□□□□□ -0.65
CRLF3-205ENST00000583805 FBXW7Q969H0 707 aa10.98□□□□□ -0.65
CRLF3-205ENST00000583805 GPR37O15354 613 aa10.97□□□□□ -0.65
CRLF3-205ENST00000583805 FKBP1AP62942 108 aaKnown RBP10.97□□□□□ -0.65
CRLF3-205ENST00000583805 CCDC57Q2TAC2 916 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms