RNA–Protein interactions for RNA: ENST00000582275.5

CDK5RAP3-224, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 442 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-224ENST00000582275 TTLL5Q6EMB2 1281 aa11.36□□□□□ -0.59
CDK5RAP3-224ENST00000582275 CCDC191Q8NCU4 936 aa11.36□□□□□ -0.59
CDK5RAP3-224ENST00000582275 ZNF428Q96B54 188 aa11.36□□□□□ -0.59
CDK5RAP3-224ENST00000582275 FARP1Q9Y4F1 1045 aaPredicted RBP11.36□□□□□ -0.59
CDK5RAP3-224ENST00000582275 NR2E3Q9Y5X4 410 aa11.36□□□□□ -0.59
CDK5RAP3-224ENST00000582275 HTTP42858 3142 aa11.36□□□□□ -0.59
CDK5RAP3-224ENST00000582275 CUL9Q8IWT3 2517 aa11.35□□□□□ -0.59
CDK5RAP3-224ENST00000582275 PCCAP05165 728 aaPredicted RBP11.35□□□□□ -0.59
CDK5RAP3-224ENST00000582275 RIC3Q7Z5B4 369 aa11.35□□□□□ -0.59
CDK5RAP3-224ENST00000582275 ZBED3Q96IU2 234 aaPredicted RBP11.35□□□□□ -0.59
CDK5RAP3-224ENST00000582275 CLMNQ96JQ2 1002 aa11.35□□□□□ -0.59
CDK5RAP3-224ENST00000582275 BSDC1Q9NW68 430 aaPredicted RBP11.35□□□□□ -0.59
CDK5RAP3-224ENST00000582275 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.35□□□□□ -0.59
CDK5RAP3-224ENST00000582275 LEMD3Q9Y2U8 911 aa11.35□□□□□ -0.59
CDK5RAP3-224ENST00000582275 COL4A1P02462 1669 aa11.35□□□□□ -0.59
CDK5RAP3-224ENST00000582275 ZNF804BA4D1E1 1349 aa11.35□□□□□ -0.59
CDK5RAP3-224ENST00000582275 CCT4P50991 539 aaKnown RBP11.34□□□□□ -0.59
CDK5RAP3-224ENST00000582275 TAF1CQ15572 869 aaPredicted RBP11.34□□□□□ -0.59
CDK5RAP3-224ENST00000582275 KIAA0825Q8IV33 1275 aa11.34□□□□□ -0.59
CDK5RAP3-224ENST00000582275 MTMR14Q8NCE2 650 aa11.34□□□□□ -0.59
CDK5RAP3-224ENST00000582275 MXD3Q9BW11 206 aa11.34□□□□□ -0.59
CDK5RAP3-224ENST00000582275 CHL1O00533 1208 aa11.33□□□□□ -0.6
CDK5RAP3-224ENST00000582275 CAPN2P17655 700 aa11.33□□□□□ -0.6
CDK5RAP3-224ENST00000582275 GTF2A2P52657 109 aa11.33□□□□□ -0.6
CDK5RAP3-224ENST00000582275 PTPN18Q99952 460 aa11.33□□□□□ -0.6
CDK5RAP3-224ENST00000582275 ZCCHC17Q9NP64 241 aaKnown RBP11.33□□□□□ -0.6
CDK5RAP3-224ENST00000582275 CWC25Q9NXE8 425 aaPredicted RBP11.33□□□□□ -0.6
CDK5RAP3-224ENST00000582275 MINPP1Q9UNW1 487 aa11.33□□□□□ -0.6
CDK5RAP3-224ENST00000582275 TNFAIP1Q13829 316 aa11.32□□□□□ -0.6
CDK5RAP3-224ENST00000582275 HELBQ8NG08 1087 aaPredicted RBP11.32□□□□□ -0.6
CDK5RAP3-224ENST00000582275 OPTNQ96CV9 577 aa11.32□□□□□ -0.6
CDK5RAP3-224ENST00000582275 ANKRD2Q9GZV1 360 aa11.32□□□□□ -0.6
CDK5RAP3-224ENST00000582275 PRO3102Q9H379 93 aa11.32□□□□□ -0.6
CDK5RAP3-224ENST00000582275 FZD1Q9UP38 647 aa11.32□□□□□ -0.6
CDK5RAP3-224ENST00000582275 USP2O75604 605 aaPredicted RBP11.31□□□□□ -0.6
CDK5RAP3-224ENST00000582275 MYCP01106 439 aaPredicted RBP11.31□□□□□ -0.6
CDK5RAP3-224ENST00000582275 HOXD10P28358 340 aa11.31□□□□□ -0.6
CDK5RAP3-224ENST00000582275 GJA5P36382 358 aa11.31□□□□□ -0.6
CDK5RAP3-224ENST00000582275 TMPOP42166 694 aaKnown RBP11.31□□□□□ -0.6
CDK5RAP3-224ENST00000582275 CTSWP56202 376 aa11.31□□□□□ -0.6
CDK5RAP3-224ENST00000582275 GTF2IP78347 998 aa11.31□□□□□ -0.6
CDK5RAP3-224ENST00000582275 GPR153Q6NV75 609 aa11.31□□□□□ -0.6
CDK5RAP3-224ENST00000582275 SH3TC2Q8TF17 1288 aa11.31□□□□□ -0.6
CDK5RAP3-224ENST00000582275 MS4A4AQ96JQ5 239 aa11.31□□□□□ -0.6
CDK5RAP3-224ENST00000582275 CCDC85AQ96PX6 553 aaPredicted RBP11.31□□□□□ -0.6
CDK5RAP3-224ENST00000582275 CHMP4AQ9BY43 222 aa11.31□□□□□ -0.6
CDK5RAP3-224ENST00000582275 ZNF646O15015 1829 aaPredicted RBP11.3□□□□□ -0.6
CDK5RAP3-224ENST00000582275 SSC5DA1L4H1 1573 aa11.3□□□□□ -0.6
CDK5RAP3-224ENST00000582275 CCL15-CCL14A0A0B4J2E2 113 aa11.3□□□□□ -0.6
CDK5RAP3-224ENST00000582275 TLR2O60603 784 aa11.3□□□□□ -0.6
CDK5RAP3-224ENST00000582275 DDX58O95786 925 aaKnown RBP11.3□□□□□ -0.6
CDK5RAP3-224ENST00000582275 IGHMBP2P38935 993 aaKnown RBP11.3□□□□□ -0.6
CDK5RAP3-224ENST00000582275 FKBP1AP62942 108 aaKnown RBP11.3□□□□□ -0.6
CDK5RAP3-224ENST00000582275 LACTBP83111 547 aaPredicted RBP11.3□□□□□ -0.6
CDK5RAP3-224ENST00000582275 CAP1Q01518 475 aa11.3□□□□□ -0.6
CDK5RAP3-224ENST00000582275 CCL15Q16663 113 aa11.3□□□□□ -0.6
CDK5RAP3-224ENST00000582275 BRI3BPQ8WY22 251 aa11.3□□□□□ -0.6
CDK5RAP3-224ENST00000582275 MYD88Q99836 296 aa11.3□□□□□ -0.6
CDK5RAP3-224ENST00000582275 CENPFP49454 3210 aa11.3□□□□□ -0.6
CDK5RAP3-224ENST00000582275 WTIPA6NIX2 430 aaPredicted RBP11.29□□□□□ -0.6
CDK5RAP3-224ENST00000582275 GJB1P08034 283 aa11.29□□□□□ -0.6
CDK5RAP3-224ENST00000582275 KCNJ4P48050 445 aa11.29□□□□□ -0.6
CDK5RAP3-224ENST00000582275 GJA8P48165 433 aa11.29□□□□□ -0.6
CDK5RAP3-224ENST00000582275 KRT24Q2M2I5 525 aa11.29□□□□□ -0.6
CDK5RAP3-224ENST00000582275 NBPF12Q5TAG4 269 aaPredicted RBP11.29□□□□□ -0.6
CDK5RAP3-224ENST00000582275 CCER1Q8TC90 406 aaPredicted RBP11.29□□□□□ -0.6
CDK5RAP3-224ENST00000582275 ELP3Q9H9T3 547 aa11.29□□□□□ -0.6
CDK5RAP3-224ENST00000582275 VEZTQ9HBM0 779 aa11.29□□□□□ -0.6
CDK5RAP3-224ENST00000582275 LAS1LQ9Y4W2 734 aaKnown RBP11.29□□□□□ -0.6
CDK5RAP3-224ENST00000582275 CSADQ9Y600 493 aa11.29□□□□□ -0.6
CDK5RAP3-224ENST00000582275 ECM29Q5VYK3 1845 aa11.28□□□□□ -0.6
CDK5RAP3-224ENST00000582275 CLRN2A0PK11 232 aa11.28□□□□□ -0.6
CDK5RAP3-224ENST00000582275 ZBTB7BO15156 539 aaPredicted RBP11.28□□□□□ -0.6
CDK5RAP3-224ENST00000582275 CETPP11597 493 aa11.28□□□□□ -0.6
CDK5RAP3-224ENST00000582275 UBXN2AP68543 259 aa11.28□□□□□ -0.6
CDK5RAP3-224ENST00000582275 RASA3Q14644 834 aa11.28□□□□□ -0.6
CDK5RAP3-224ENST00000582275 CFAP100Q494V2 611 aa11.28□□□□□ -0.6
CDK5RAP3-224ENST00000582275 DUSP27Q5VZP5 1158 aa11.28□□□□□ -0.6
CDK5RAP3-224ENST00000582275 TTLL11Q8NHH1 800 aa11.28□□□□□ -0.6
CDK5RAP3-224ENST00000582275 SHISA4Q96DD7 197 aa11.28□□□□□ -0.6
CDK5RAP3-224ENST00000582275 TRIM47Q96LD4 638 aa11.28□□□□□ -0.6
CDK5RAP3-224ENST00000582275 CD209Q9NNX6 404 aa11.28□□□□□ -0.6
CDK5RAP3-224ENST00000582275 BRCA2P51587 3418 aa11.27□□□□□ -0.6
CDK5RAP3-224ENST00000582275 EVI5O60447 810 aa11.27□□□□□ -0.61
CDK5RAP3-224ENST00000582275 GRK4P32298 578 aa11.27□□□□□ -0.61
CDK5RAP3-224ENST00000582275 MAP3K9P80192 1104 aa11.27□□□□□ -0.61
CDK5RAP3-224ENST00000582275 UBE2Q1Q7Z7E8 422 aa11.27□□□□□ -0.61
CDK5RAP3-224ENST00000582275 TXNRD3Q86VQ6 643 aa11.27□□□□□ -0.61
CDK5RAP3-224ENST00000582275 FAM43AQ8N2R8 423 aa11.27□□□□□ -0.61
CDK5RAP3-224ENST00000582275 RAET1EQ8TD07 263 aa11.27□□□□□ -0.61
CDK5RAP3-224ENST00000582275 MPHOSPH8Q99549 860 aa11.27□□□□□ -0.61
CDK5RAP3-224ENST00000582275 METTL22Q9BUU2 404 aaPredicted RBP11.27□□□□□ -0.61
CDK5RAP3-224ENST00000582275 SZT2Q5T011 3432 aa11.26□□□□□ -0.61
CDK5RAP3-224ENST00000582275 FARP2O94887 1054 aaPredicted RBP11.26□□□□□ -0.61
CDK5RAP3-224ENST00000582275 TNNI2P48788 182 aa11.26□□□□□ -0.61
CDK5RAP3-224ENST00000582275 RBM5P52756 815 aaKnown RBP eCLIP11.26□□□□□ -0.61
CDK5RAP3-224ENST00000582275 PRMT6Q96LA8 375 aaPredicted RBP11.26□□□□□ -0.61
CDK5RAP3-224ENST00000582275 RNF208Q9H0X6 261 aa11.26□□□□□ -0.61
CDK5RAP3-224ENST00000582275 GREM2Q9H772 168 aa11.26□□□□□ -0.61
CDK5RAP3-224ENST00000582275 ZBTB47Q9UFB7 747 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms