RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 DOK7Q18PE1 504 aa15.32■□□□□ 0.04
SRSF1-204ENST00000581979 LRRC24Q50LG9 513 aa15.32■□□□□ 0.04
SRSF1-204ENST00000581979 TNNI3KQ59H18 835 aa15.32■□□□□ 0.04
SRSF1-204ENST00000581979 ATG9AQ7Z3C6 839 aa15.32■□□□□ 0.04
SRSF1-204ENST00000581979 GPR101Q96P66 508 aaPredicted RBP15.32■□□□□ 0.04
SRSF1-204ENST00000581979 BSDC1Q9NW68 430 aaPredicted RBP15.32■□□□□ 0.04
SRSF1-204ENST00000581979 FPGT-TNNI3KV9GXZ4 949 aa15.32■□□□□ 0.04
SRSF1-204ENST00000581979 XDHP47989 1333 aa15.32■□□□□ 0.04
SRSF1-204ENST00000581979 H7C1D1 291 aa15.31■□□□□ 0.04
SRSF1-204ENST00000581979 HSPA1AP0DMV8 641 aaKnown RBP15.31■□□□□ 0.04
SRSF1-204ENST00000581979 HSPA1BP0DMV9 641 aaKnown RBP15.31■□□□□ 0.04
SRSF1-204ENST00000581979 RPS12P25398 132 aaKnown RBP15.31■□□□□ 0.04
SRSF1-204ENST00000581979 HIRAP54198 1017 aaPredicted RBP15.31■□□□□ 0.04
SRSF1-204ENST00000581979 MFAP1P55081 439 aaKnown RBP15.31■□□□□ 0.04
SRSF1-204ENST00000581979 CASC1Q6TDU7 716 aa15.31■□□□□ 0.04
SRSF1-204ENST00000581979 TBC1D9Q6ZT07 1266 aa15.31■□□□□ 0.04
SRSF1-204ENST00000581979 PI4K2BQ8TCG2 481 aa15.31■□□□□ 0.04
SRSF1-204ENST00000581979 RILPL2Q969X0 211 aa15.31■□□□□ 0.04
SRSF1-204ENST00000581979 PUS3Q9BZE2 481 aaKnown RBP15.31■□□□□ 0.04
SRSF1-204ENST00000581979 ECHDC1Q9NTX5 307 aa15.31■□□□□ 0.04
SRSF1-204ENST00000581979 ZBTB12Q9Y330 459 aaPredicted RBP15.31■□□□□ 0.04
SRSF1-204ENST00000581979 ATP2B4P23634 1241 aa15.31■□□□□ 0.04
SRSF1-204ENST00000581979 VEGFBP49765 207 aa15.31■□□□□ 0.04
SRSF1-204ENST00000581979 MICALL2Q8IY33 904 aa15.31■□□□□ 0.04
SRSF1-204ENST00000581979 TRPM4Q8TD43 1214 aa15.31■□□□□ 0.04
SRSF1-204ENST00000581979 KCNQ5Q9NR82 932 aa15.31■□□□□ 0.04
SRSF1-204ENST00000581979 SCN9AQ15858 1988 aa15.31■□□□□ 0.04
SRSF1-204ENST00000581979 TRPM7Q96QT4 1865 aa15.3■□□□□ 0.04
SRSF1-204ENST00000581979 SPEF2Q9C093 1822 aa15.3■□□□□ 0.04
SRSF1-204ENST00000581979 SHTN1A0MZ66 631 aa15.3■□□□□ 0.04
SRSF1-204ENST00000581979 TRAF5O00463 557 aa15.3■□□□□ 0.04
SRSF1-204ENST00000581979 GLRX3O76003 335 aaKnown RBP15.3■□□□□ 0.04
SRSF1-204ENST00000581979 VIL1P09327 827 aaKnown RBP15.3■□□□□ 0.04
SRSF1-204ENST00000581979 FMR1Q06787 632 aaKnown RBP eCLIP15.3■□□□□ 0.04
SRSF1-204ENST00000581979 CST9Q5W186 159 aa15.3■□□□□ 0.04
SRSF1-204ENST00000581979 MINPP1Q9UNW1 487 aa15.3■□□□□ 0.04
SRSF1-204ENST00000581979 DEFB115Q30KQ5 88 aa15.29■□□□□ 0.04
SRSF1-204ENST00000581979 LDHAL6AQ6ZMR3 332 aa15.29■□□□□ 0.04
SRSF1-204ENST00000581979 GPR108Q9NPR9 543 aa15.29■□□□□ 0.04
SRSF1-204ENST00000581979 CNNM1Q9NRU3 951 aa15.29■□□□□ 0.04
SRSF1-204ENST00000581979 TLR7Q9NYK1 1049 aaKnown RBP15.29■□□□□ 0.04
SRSF1-204ENST00000581979 CEP126Q9P2H0 1117 aa15.29■□□□□ 0.04
SRSF1-204ENST00000581979 ZNF609O15014 1411 aa15.29■□□□□ 0.04
SRSF1-204ENST00000581979 EIF5BO60841 1220 aaKnown RBP15.29■□□□□ 0.04
SRSF1-204ENST00000581979 MAP4K4O95819 1239 aaPredicted RBP15.29■□□□□ 0.04
SRSF1-204ENST00000581979 G3V3G9 751 aa15.28■□□□□ 0.04
SRSF1-204ENST00000581979 DCAF8Q5TAQ9 597 aa15.28■□□□□ 0.04
SRSF1-204ENST00000581979 COL13A1Q5TAT6 717 aaPredicted RBP15.28■□□□□ 0.04
SRSF1-204ENST00000581979 NEUROD6Q96NK8 337 aa15.28■□□□□ 0.04
SRSF1-204ENST00000581979 ABT1Q9ULW3 272 aaKnown RBP15.28■□□□□ 0.04
SRSF1-204ENST00000581979 MED23Q9ULK4 1368 aa15.28■□□□□ 0.04
SRSF1-204ENST00000581979 PSME4Q14997 1843 aa15.27■□□□□ 0.04
SRSF1-204ENST00000581979 IGHMBP2P38935 993 aaKnown RBP15.27■□□□□ 0.04
SRSF1-204ENST00000581979 METTL24Q5JXM2 366 aa15.27■□□□□ 0.04
SRSF1-204ENST00000581979 CDC37L1Q7L3B6 337 aa15.27■□□□□ 0.04
SRSF1-204ENST00000581979 SAMD7Q7Z3H4 446 aa15.27■□□□□ 0.04
SRSF1-204ENST00000581979 PODNQ7Z5L7 613 aa15.27■□□□□ 0.04
SRSF1-204ENST00000581979 GLIS2Q9BZE0 524 aaPredicted RBP15.27■□□□□ 0.04
SRSF1-204ENST00000581979 DBNLQ9UJU6 430 aaKnown RBP15.27■□□□□ 0.04
SRSF1-204ENST00000581979 AKAP2Q9Y2D5 859 aa15.27■□□□□ 0.04
SRSF1-204ENST00000581979 WTIPA6NIX2 430 aaPredicted RBP15.26■□□□□ 0.03
SRSF1-204ENST00000581979 DBNDD2Q9BQY9 259 aa15.26■□□□□ 0.03
SRSF1-204ENST00000581979 TLL2Q9Y6L7 1015 aa15.26■□□□□ 0.03
SRSF1-204ENST00000581979 WDR33Q9C0J8 1336 aaKnown RBP15.26■□□□□ 0.03
SRSF1-204ENST00000581979 EGFRP00533 1210 aa15.26■□□□□ 0.03
SRSF1-204ENST00000581979 TIMM10P62072 90 aa15.26■□□□□ 0.03
SRSF1-204ENST00000581979 RSBN1LQ6PCB5 846 aaPredicted RBP15.26■□□□□ 0.03
SRSF1-204ENST00000581979 AGBL3Q8NEM8 1001 aa15.26■□□□□ 0.03
SRSF1-204ENST00000581979 MPHOSPH8Q99549 860 aa15.26■□□□□ 0.03
SRSF1-204ENST00000581979 LEMD3Q9Y2U8 911 aa15.26■□□□□ 0.03
SRSF1-204ENST00000581979 RIPOR2Q9Y4F9 1068 aa15.26■□□□□ 0.03
SRSF1-204ENST00000581979 A0A1B0GUL7 405 aa15.25■□□□□ 0.03
SRSF1-204ENST00000581979 ZNF280AP59817 542 aaPredicted RBP15.25■□□□□ 0.03
SRSF1-204ENST00000581979 TBC1D10BQ4KMP7 808 aaPredicted RBP15.25■□□□□ 0.03
SRSF1-204ENST00000581979 GMLQ99445 158 aa15.25■□□□□ 0.03
SRSF1-204ENST00000581979 C22orf23Q9BZE7 217 aa15.25■□□□□ 0.03
SRSF1-204ENST00000581979 ANKRD2Q9GZV1 360 aa15.25■□□□□ 0.03
SRSF1-204ENST00000581979 BOLA2Q9H3K6 86 aa15.25■□□□□ 0.03
SRSF1-204ENST00000581979 CELF2O95319 508 aaKnown RBP15.24■□□□□ 0.03
SRSF1-204ENST00000581979 TBC1D32Q96NH3 1257 aa15.24■□□□□ 0.03
SRSF1-204ENST00000581979 WBP1LQ9NX94 342 aa15.24■□□□□ 0.03
SRSF1-204ENST00000581979 MROH5Q6ZUA9 1318 aa15.23■□□□□ 0.03
SRSF1-204ENST00000581979 USP17L3A6NCW0 530 aa15.23■□□□□ 0.03
SRSF1-204ENST00000581979 USP17L4A6NCW7 530 aa15.23■□□□□ 0.03
SRSF1-204ENST00000581979 ATP5JP18859 108 aa15.23■□□□□ 0.03
SRSF1-204ENST00000581979 KIF4BQ2VIQ3 1234 aa15.23■□□□□ 0.03
SRSF1-204ENST00000581979 USP17L1Q7RTZ2 530 aa15.23■□□□□ 0.03
SRSF1-204ENST00000581979 SAPCD2Q86UD0 394 aa15.23■□□□□ 0.03
SRSF1-204ENST00000581979 EVI5LQ96CN4 794 aa15.23■□□□□ 0.03
SRSF1-204ENST00000581979 HHIPL1Q96JK4 782 aa15.23■□□□□ 0.03
SRSF1-204ENST00000581979 THSD7BQ9C0I4 1608 aa15.23■□□□□ 0.03
SRSF1-204ENST00000581979 CHMLP26374 656 aa15.23■□□□□ 0.03
SRSF1-204ENST00000581979 ECE1P42892 770 aa15.23■□□□□ 0.03
SRSF1-204ENST00000581979 ATP2B3Q16720 1220 aa15.23■□□□□ 0.03
SRSF1-204ENST00000581979 RBM26Q5T8P6 1007 aaKnown RBP15.23■□□□□ 0.03
SRSF1-204ENST00000581979 USP48Q86UV5 1035 aa15.23■□□□□ 0.03
SRSF1-204ENST00000581979 CAPNS2Q96L46 248 aa15.23■□□□□ 0.03
SRSF1-204ENST00000581979 COA1Q9GZY4 146 aa15.23■□□□□ 0.03
SRSF1-204ENST00000581979 POLR2AP24928 1970 aaKnown RBP15.22■□□□□ 0.03
SRSF1-204ENST00000581979 ZNF804BA4D1E1 1349 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms