RNA–Protein interactions for RNA: ENST00000581497.1

SRSF1-203, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 3

Gene SRSF1, Length 438 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-203ENST00000581497 DALRD3Q5D0E6 543 aaKnown RBP10.38□□□□□ -0.75
SRSF1-203ENST00000581497 TRMT44Q8IYL2 757 aaKnown RBP10.38□□□□□ -0.75
SRSF1-203ENST00000581497 CCDC116Q8IYX3 515 aa10.38□□□□□ -0.75
SRSF1-203ENST00000581497 ZC3H15Q8WU90 426 aaKnown RBP10.38□□□□□ -0.75
SRSF1-203ENST00000581497 SENP3-EIF4A1A0A087X0R7 540 aa10.37□□□□□ -0.75
SRSF1-203ENST00000581497 RNF225M0QZC1 329 aaPredicted RBP10.37□□□□□ -0.75
SRSF1-203ENST00000581497 SERPINB2P05120 415 aa10.37□□□□□ -0.75
SRSF1-203ENST00000581497 IL6STP40189 918 aaPredicted RBP10.37□□□□□ -0.75
SRSF1-203ENST00000581497 RASSF7Q02833 373 aa10.37□□□□□ -0.75
SRSF1-203ENST00000581497 PTSQ03393 145 aa10.37□□□□□ -0.75
SRSF1-203ENST00000581497 MCM10Q7L590 875 aa10.37□□□□□ -0.75
SRSF1-203ENST00000581497 SH3BP5LQ7L8J4 393 aa10.37□□□□□ -0.75
SRSF1-203ENST00000581497 ZNF526Q8TF50 670 aaPredicted RBP10.37□□□□□ -0.75
SRSF1-203ENST00000581497 MAGEB6P1A0A0J9YX57 407 aa10.36□□□□□ -0.75
SRSF1-203ENST00000581497 KCNQ3O43525 872 aa10.36□□□□□ -0.75
SRSF1-203ENST00000581497 GDF11O95390 407 aa10.36□□□□□ -0.75
SRSF1-203ENST00000581497 CHRNA5P30532 468 aa10.36□□□□□ -0.75
SRSF1-203ENST00000581497 PNNQ9H307 717 aaKnown RBP10.36□□□□□ -0.75
SRSF1-203ENST00000581497 ADAMTS8Q9UP79 889 aa10.36□□□□□ -0.75
SRSF1-203ENST00000581497 ZNF330Q9Y3S2 320 aaPredicted RBP10.36□□□□□ -0.75
SRSF1-203ENST00000581497 A1BGP04217 495 aa10.35□□□□□ -0.75
SRSF1-203ENST00000581497 SNRPA1P09661 255 aaKnown RBP10.35□□□□□ -0.75
SRSF1-203ENST00000581497 DCTN1Q14203 1278 aa10.35□□□□□ -0.75
SRSF1-203ENST00000581497 TAF7Q15545 349 aaPredicted RBP10.35□□□□□ -0.75
SRSF1-203ENST00000581497 QPCTQ16769 361 aa10.35□□□□□ -0.75
SRSF1-203ENST00000581497 BICDL1Q6ZP65 573 aa10.35□□□□□ -0.75
SRSF1-203ENST00000581497 LIMD1Q9UGP4 676 aa10.35□□□□□ -0.75
SRSF1-203ENST00000581497 KIF13BQ9NQT8 1826 aa10.35□□□□□ -0.75
SRSF1-203ENST00000581497 GOLGB1Q14789 3259 aaKnown RBP10.34□□□□□ -0.75
SRSF1-203ENST00000581497 TRIM66O15016 1216 aa10.34□□□□□ -0.75
SRSF1-203ENST00000581497 RALBP1Q15311 655 aa10.34□□□□□ -0.75
SRSF1-203ENST00000581497 TBC1D9BQ66K14 1250 aa10.34□□□□□ -0.75
SRSF1-203ENST00000581497 COL25A1Q9BXS0 654 aaPredicted RBP10.34□□□□□ -0.75
SRSF1-203ENST00000581497 TBC1D2BQ9UPU7 963 aa10.34□□□□□ -0.75
SRSF1-203ENST00000581497 USP16Q9Y5T5 823 aa10.34□□□□□ -0.75
SRSF1-203ENST00000581497 UBR2Q8IWV8 1755 aa10.34□□□□□ -0.75
SRSF1-203ENST00000581497 FIGNL2A6NMB9 653 aa10.33□□□□□ -0.76
SRSF1-203ENST00000581497 H0YIN7 160 aa10.33□□□□□ -0.76
SRSF1-203ENST00000581497 CAMTA2O94983 1202 aa10.33□□□□□ -0.76
SRSF1-203ENST00000581497 TUSC1Q2TAM9 212 aa10.33□□□□□ -0.76
SRSF1-203ENST00000581497 C9orf131Q5VYM1 1079 aa10.33□□□□□ -0.76
SRSF1-203ENST00000581497 DZIP3Q86Y13 1208 aaKnown RBP10.33□□□□□ -0.76
SRSF1-203ENST00000581497 HELBQ8NG08 1087 aaPredicted RBP10.33□□□□□ -0.76
SRSF1-203ENST00000581497 PNISRQ8TF01 805 aaKnown RBP10.33□□□□□ -0.76
SRSF1-203ENST00000581497 NANOS1Q8WY41 292 aaKnown RBP10.33□□□□□ -0.76
SRSF1-203ENST00000581497 SETDB2Q96T68 719 aa10.33□□□□□ -0.76
SRSF1-203ENST00000581497 KIAA1551Q9HCM1 1747 aa10.33□□□□□ -0.76
SRSF1-203ENST00000581497 MAPK8IP3Q9UPT6 1336 aa10.33□□□□□ -0.76
SRSF1-203ENST00000581497 CARMIL3Q8ND23 1372 aa10.32□□□□□ -0.76
SRSF1-203ENST00000581497 PRAMEF22A3QJZ6 481 aa10.32□□□□□ -0.76
SRSF1-203ENST00000581497 NPHP1O15259 732 aa10.32□□□□□ -0.76
SRSF1-203ENST00000581497 LILRB3O75022 631 aa10.32□□□□□ -0.76
SRSF1-203ENST00000581497 NFE2L2Q16236 605 aa10.32□□□□□ -0.76
SRSF1-203ENST00000581497 MYSM1Q5VVJ2 828 aa10.32□□□□□ -0.76
SRSF1-203ENST00000581497 C2CD5Q86YS7 1000 aa10.32□□□□□ -0.76
SRSF1-203ENST00000581497 TTLL6Q8N841 843 aa10.32□□□□□ -0.76
SRSF1-203ENST00000581497 PLEKHF1Q96S99 279 aa10.32□□□□□ -0.76
SRSF1-203ENST00000581497 BRIP1Q9BX63 1249 aa10.32□□□□□ -0.76
SRSF1-203ENST00000581497 N4BP2Q86UW6 1770 aaPredicted RBP10.31□□□□□ -0.76
SRSF1-203ENST00000581497 PDE6BP35913 854 aa10.31□□□□□ -0.76
SRSF1-203ENST00000581497 CBLBQ13191 982 aa10.31□□□□□ -0.76
SRSF1-203ENST00000581497 PPP1R26Q5T8A7 1209 aaPredicted RBP10.31□□□□□ -0.76
SRSF1-203ENST00000581497 CLEC4GQ6UXB4 293 aa10.31□□□□□ -0.76
SRSF1-203ENST00000581497 CCDC155Q8N6L0 562 aa10.31□□□□□ -0.76
SRSF1-203ENST00000581497 CNBD1Q8NA66 436 aa10.31□□□□□ -0.76
SRSF1-203ENST00000581497 PGPEP1Q9NXJ5 209 aa10.31□□□□□ -0.76
SRSF1-203ENST00000581497 RNF181Q9P0P0 153 aa10.31□□□□□ -0.76
SRSF1-203ENST00000581497 ZNF652Q9Y2D9 606 aa10.31□□□□□ -0.76
SRSF1-203ENST00000581497 SPINT1O43278 529 aa10.3□□□□□ -0.76
SRSF1-203ENST00000581497 PIP4K2AP48426 406 aaPredicted RBP10.3□□□□□ -0.76
SRSF1-203ENST00000581497 ST5P78524 1137 aa10.3□□□□□ -0.76
SRSF1-203ENST00000581497 DDX10Q13206 875 aaKnown RBP10.3□□□□□ -0.76
SRSF1-203ENST00000581497 RNFT1Q5M7Z0 435 aa10.3□□□□□ -0.76
SRSF1-203ENST00000581497 ZNF385CQ66K41 422 aaPredicted RBP10.3□□□□□ -0.76
SRSF1-203ENST00000581497 PRR5LQ6MZQ0 368 aa10.3□□□□□ -0.76
SRSF1-203ENST00000581497 Q6ZVU0 165 aa10.3□□□□□ -0.76
SRSF1-203ENST00000581497 SVOPQ8N4V2 548 aa10.3□□□□□ -0.76
SRSF1-203ENST00000581497 GPKOWQ92917 476 aaPredicted RBP eCLIP10.3□□□□□ -0.76
SRSF1-203ENST00000581497 MIS18AQ9NYP9 233 aa10.3□□□□□ -0.76
SRSF1-203ENST00000581497 SIPA1L3O60292 1781 aaPredicted RBP10.29□□□□□ -0.76
SRSF1-203ENST00000581497 VIRMAQ69YN4 1812 aaKnown RBP10.29□□□□□ -0.76
SRSF1-203ENST00000581497 ERFEQ4G0M1 354 aa10.29□□□□□ -0.76
SRSF1-203ENST00000581497 ZNF622Q969S3 477 aaKnown RBP eCLIP10.29□□□□□ -0.76
SRSF1-203ENST00000581497 KDM2BQ8NHM5 1336 aa10.29□□□□□ -0.76
SRSF1-203ENST00000581497 NRXN2Q9P2S2 1712 aa10.28□□□□□ -0.76
SRSF1-203ENST00000581497 TOMM70O94826 608 aa10.28□□□□□ -0.76
SRSF1-203ENST00000581497 HSPA6P17066 643 aa10.28□□□□□ -0.76
SRSF1-203ENST00000581497 LMNB1P20700 586 aa10.28□□□□□ -0.76
SRSF1-203ENST00000581497 EIF4A1P60842 406 aaKnown RBP10.28□□□□□ -0.76
SRSF1-203ENST00000581497 NBPF10Q6P3W6 841 aaKnown RBP10.28□□□□□ -0.76
SRSF1-203ENST00000581497 NBPF5PQ86XG9 351 aaPredicted RBP10.28□□□□□ -0.76
SRSF1-203ENST00000581497 NBPF15Q8N660 670 aa10.28□□□□□ -0.76
SRSF1-203ENST00000581497 MYBBP1AQ9BQG0 1328 aaKnown RBP10.28□□□□□ -0.76
SRSF1-203ENST00000581497 ZC3H4Q9UPT8 1303 aaKnown RBP10.28□□□□□ -0.76
SRSF1-203ENST00000581497 SLC35F4A4IF30 521 aa10.27□□□□□ -0.77
SRSF1-203ENST00000581497 LMOD3Q0VAK6 560 aa10.27□□□□□ -0.77
SRSF1-203ENST00000581497 RTL5Q5HYW3 569 aaPredicted RBP10.27□□□□□ -0.77
SRSF1-203ENST00000581497 TPTE2Q6XPS3 522 aa10.27□□□□□ -0.77
SRSF1-203ENST00000581497 C16orf71Q8IYS4 520 aaPredicted RBP10.27□□□□□ -0.77
SRSF1-203ENST00000581497 CNKSR1Q969H4 720 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 169.5 ms