RNA–Protein interactions for RNA: ENST00000581487.1

CMTM4-205, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

Gene CMTM4, Length 7,026 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-205ENST00000581487 GOLGA8BA8MQT2 603 aa8.41□□□□□ -1.06
CMTM4-205ENST00000581487 FAM160A1Q05DH4 1040 aa8.41□□□□□ -1.06
CMTM4-205ENST00000581487 PPP2R5AQ15172 486 aa8.41□□□□□ -1.06
CMTM4-205ENST00000581487 AMOTQ4VCS5 1084 aa8.41□□□□□ -1.06
CMTM4-205ENST00000581487 NSRP1Q9H0G5 558 aaKnown RBP8.41□□□□□ -1.06
CMTM4-205ENST00000581487 NUCKS1Q9H1E3 243 aaKnown RBP8.41□□□□□ -1.06
CMTM4-205ENST00000581487 ZRANB1Q9UGI0 708 aa8.41□□□□□ -1.06
CMTM4-205ENST00000581487 ZMYM3Q14202 1370 aa8.41□□□□□ -1.06
CMTM4-205ENST00000581487 PTGS1P23219 599 aa8.41□□□□□ -1.06
CMTM4-205ENST00000581487 EIF4A2Q14240 407 aaKnown RBP8.41□□□□□ -1.06
CMTM4-205ENST00000581487 DNAJC21Q5F1R6 531 aaKnown RBP8.41□□□□□ -1.06
CMTM4-205ENST00000581487 POTEDQ86YR6 584 aa8.41□□□□□ -1.06
CMTM4-205ENST00000581487 BAG1Q99933 345 aaPredicted RBP8.41□□□□□ -1.06
CMTM4-205ENST00000581487 SUFUQ9UMX1 484 aa8.41□□□□□ -1.06
CMTM4-205ENST00000581487 HNRNPCL2B2RXH8 293 aa8.41□□□□□ -1.06
CMTM4-205ENST00000581487 HNRNPCL1O60812 293 aaKnown RBP8.41□□□□□ -1.06
CMTM4-205ENST00000581487 FAM180AQ6UWF9 173 aa8.41□□□□□ -1.06
CMTM4-205ENST00000581487 CTAGE6Q86UF2 777 aa8.41□□□□□ -1.06
CMTM4-205ENST00000581487 MYRIPQ8NFW9 859 aa8.41□□□□□ -1.06
CMTM4-205ENST00000581487 A0A1W2PP64 1363 aa8.4□□□□□ -1.06
CMTM4-205ENST00000581487 NPHP3Q7Z494 1330 aa8.4□□□□□ -1.06
CMTM4-205ENST00000581487 TRAPPC8Q9Y2L5 1435 aa8.4□□□□□ -1.06
CMTM4-205ENST00000581487 SPA17Q15506 151 aa8.4□□□□□ -1.06
CMTM4-205ENST00000581487 PROSER2Q86WR7 435 aaPredicted RBP8.4□□□□□ -1.06
CMTM4-205ENST00000581487 TRMT2AQ8IZ69 625 aaKnown RBP8.4□□□□□ -1.06
CMTM4-205ENST00000581487 ACEP12821 1306 aa8.4□□□□□ -1.06
CMTM4-205ENST00000581487 PAFAH1B1P43034 410 aa8.4□□□□□ -1.06
CMTM4-205ENST00000581487 EIF5P55010 431 aaKnown RBP8.4□□□□□ -1.06
CMTM4-205ENST00000581487 DBN1Q16643 649 aa8.4□□□□□ -1.06
CMTM4-205ENST00000581487 USP37Q86T82 979 aa8.4□□□□□ -1.06
CMTM4-205ENST00000581487 LRRC43Q8N309 656 aa8.4□□□□□ -1.06
CMTM4-205ENST00000581487 DNAI1Q9UI46 699 aa8.4□□□□□ -1.06
CMTM4-205ENST00000581487 FANCAO15360 1455 aa8.4□□□□□ -1.06
CMTM4-205ENST00000581487 CPLX4Q7Z7G2 160 aa8.4□□□□□ -1.06
CMTM4-205ENST00000581487 CCDC144CPQ8IYA2 1237 aa8.4□□□□□ -1.06
CMTM4-205ENST00000581487 CNNM3Q8NE01 707 aa8.4□□□□□ -1.07
CMTM4-205ENST00000581487 GNL3LQ9NVN8 582 aaKnown RBP8.4□□□□□ -1.07
CMTM4-205ENST00000581487 RABGAP1Q9Y3P9 1069 aa8.4□□□□□ -1.07
CMTM4-205ENST00000581487 SYCP2Q9BX26 1530 aa8.4□□□□□ -1.07
CMTM4-205ENST00000581487 DAPK3O43293 454 aa8.4□□□□□ -1.07
CMTM4-205ENST00000581487 PDE6AP16499 860 aa8.4□□□□□ -1.07
CMTM4-205ENST00000581487 ZSCAN29Q8IWY8 852 aaPredicted RBP8.4□□□□□ -1.07
CMTM4-205ENST00000581487 CCDC170Q8IYT3 715 aa8.4□□□□□ -1.07
CMTM4-205ENST00000581487 DDX27Q96GQ7 796 aaKnown RBP8.4□□□□□ -1.07
CMTM4-205ENST00000581487 MAK16Q9BXY0 300 aaKnown RBP8.4□□□□□ -1.07
CMTM4-205ENST00000581487 USP16Q9Y5T5 823 aa8.4□□□□□ -1.07
CMTM4-205ENST00000581487 ZNF521Q96K83 1311 aa8.4□□□□□ -1.07
CMTM4-205ENST00000581487 POLR3DP05423 398 aaPredicted RBP8.39□□□□□ -1.07
CMTM4-205ENST00000581487 MTHFSDQ2M296 383 aaKnown RBP8.39□□□□□ -1.07
CMTM4-205ENST00000581487 KLHL10Q6JEL2 608 aa8.39□□□□□ -1.07
CMTM4-205ENST00000581487 ORC3Q9UBD5 711 aaPredicted RBP8.39□□□□□ -1.07
CMTM4-205ENST00000581487 AKAP2Q9Y2D5 859 aa8.39□□□□□ -1.07
CMTM4-205ENST00000581487 CASQ2O14958 399 aaPredicted RBP8.39□□□□□ -1.07
CMTM4-205ENST00000581487 FAM13AO94988 1023 aa8.39□□□□□ -1.07
CMTM4-205ENST00000581487 ATP11AP98196 1134 aa8.39□□□□□ -1.07
CMTM4-205ENST00000581487 CC2D2BQ6DHV5 1058 aa8.39□□□□□ -1.07
CMTM4-205ENST00000581487 ATP6V0A1Q93050 837 aa8.39□□□□□ -1.07
CMTM4-205ENST00000581487 RAPGEF6Q8TEU7 1601 aa8.39□□□□□ -1.07
CMTM4-205ENST00000581487 PALM3A6NDB9 673 aaPredicted RBP8.39□□□□□ -1.07
CMTM4-205ENST00000581487 LPXNO60711 386 aa8.39□□□□□ -1.07
CMTM4-205ENST00000581487 GAS2L3Q86XJ1 694 aa8.39□□□□□ -1.07
CMTM4-205ENST00000581487 CCDC63Q8NA47 563 aa8.39□□□□□ -1.07
CMTM4-205ENST00000581487 MRPS27Q92552 414 aaKnown RBP8.39□□□□□ -1.07
CMTM4-205ENST00000581487 PPP1R12CQ9BZL4 782 aa8.39□□□□□ -1.07
CMTM4-205ENST00000581487 BMP2KQ9NSY1 1161 aaPredicted RBP8.39□□□□□ -1.07
CMTM4-205ENST00000581487 IRAK4Q9NWZ3 460 aa8.39□□□□□ -1.07
CMTM4-205ENST00000581487 NMIQ13287 307 aaPredicted RBP8.39□□□□□ -1.07
CMTM4-205ENST00000581487 DIXDC1Q155Q3 683 aa8.39□□□□□ -1.07
CMTM4-205ENST00000581487 TTC41PQ6P2S7 1318 aa8.39□□□□□ -1.07
CMTM4-205ENST00000581487 POGZQ7Z3K3 1410 aa8.39□□□□□ -1.07
CMTM4-205ENST00000581487 A0A087WZG4 1122 aa8.39□□□□□ -1.07
CMTM4-205ENST00000581487 TACC1O75410 805 aa8.39□□□□□ -1.07
CMTM4-205ENST00000581487 ALDH1L1O75891 902 aa8.39□□□□□ -1.07
CMTM4-205ENST00000581487 B4GALNT4Q76KP1 1039 aa8.39□□□□□ -1.07
CMTM4-205ENST00000581487 GOLGA8AA7E2F4 631 aa8.38□□□□□ -1.07
CMTM4-205ENST00000581487 FAM76AQ8TAV0 307 aa8.38□□□□□ -1.07
CMTM4-205ENST00000581487 TPX2Q9ULW0 747 aaKnown RBP8.38□□□□□ -1.07
CMTM4-205ENST00000581487 LACTBP83111 547 aaPredicted RBP8.38□□□□□ -1.07
CMTM4-205ENST00000581487 KHDRBS2Q5VWX1 349 aaKnown RBP8.38□□□□□ -1.07
CMTM4-205ENST00000581487 LRRC2Q9BYS8 371 aa8.38□□□□□ -1.07
CMTM4-205ENST00000581487 ZC3H6P61129 1189 aaKnown RBP8.38□□□□□ -1.07
CMTM4-205ENST00000581487 RAB11FIP4Q86YS3 637 aa8.38□□□□□ -1.07
CMTM4-205ENST00000581487 AOPEPQ8N6M6 819 aa8.38□□□□□ -1.07
CMTM4-205ENST00000581487 NAA15Q9BXJ9 866 aaKnown RBP8.38□□□□□ -1.07
CMTM4-205ENST00000581487 CHPF2Q9P2E5 772 aa8.38□□□□□ -1.07
CMTM4-205ENST00000581487 EIF2AK4Q9P2K8 1649 aaKnown RBP8.38□□□□□ -1.07
CMTM4-205ENST00000581487 ZNF213O14771 459 aa8.38□□□□□ -1.07
CMTM4-205ENST00000581487 ACTN2P35609 894 aa8.38□□□□□ -1.07
CMTM4-205ENST00000581487 WHAMMP3Q1A5X7 153 aa8.38□□□□□ -1.07
CMTM4-205ENST00000581487 METTL24Q5JXM2 366 aa8.38□□□□□ -1.07
CMTM4-205ENST00000581487 LUC7L2Q9Y383 392 aaKnown RBP8.38□□□□□ -1.07
CMTM4-205ENST00000581487 SOS1Q07889 1333 aaPredicted RBP8.38□□□□□ -1.07
CMTM4-205ENST00000581487 MSH6P52701 1360 aa8.38□□□□□ -1.07
CMTM4-205ENST00000581487 FOXO3O43524 673 aa8.38□□□□□ -1.07
CMTM4-205ENST00000581487 CPA1P15085 419 aa8.38□□□□□ -1.07
CMTM4-205ENST00000581487 ZSCAN26Q16670 478 aa8.38□□□□□ -1.07
CMTM4-205ENST00000581487 HDXQ7Z353 690 aa8.38□□□□□ -1.07
CMTM4-205ENST00000581487 TMEM63CQ9P1W3 806 aa8.38□□□□□ -1.07
CMTM4-205ENST00000581487 PHF8Q9UPP1 1060 aa8.38□□□□□ -1.07
CMTM4-205ENST00000581487 C17orf53Q8N3J3 647 aaPredicted RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms