RNA–Protein interactions for RNA: ENST00000581273.5

TVP23C-208, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 3

Gene TVP23C, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-208ENST00000581273 NARFQ9UHQ1 456 aa8.85□□□□□ -0.99
TVP23C-208ENST00000581273 ZNF330Q9Y3S2 320 aaPredicted RBP8.85□□□□□ -0.99
TVP23C-208ENST00000581273 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.85□□□□□ -0.99
TVP23C-208ENST00000581273 ADAMTSL1Q8N6G6 1762 aa8.85□□□□□ -0.99
TVP23C-208ENST00000581273 COL15A1P39059 1388 aa8.85□□□□□ -0.99
TVP23C-208ENST00000581273 NPHP1O15259 732 aa8.84□□□□□ -0.99
TVP23C-208ENST00000581273 C21orf2O43822 256 aa8.84□□□□□ -0.99
TVP23C-208ENST00000581273 CD2BP2O95400 341 aaKnown RBP8.84□□□□□ -0.99
TVP23C-208ENST00000581273 HMOX1P09601 288 aa8.84□□□□□ -0.99
TVP23C-208ENST00000581273 SLFN14P0C7P3 912 aa8.84□□□□□ -0.99
TVP23C-208ENST00000581273 U2AF1L5P0DN76 240 aaPredicted RBP8.84□□□□□ -0.99
TVP23C-208ENST00000581273 CCDC192P0DO97 292 aa8.84□□□□□ -0.99
TVP23C-208ENST00000581273 U2AF2P26368 475 aaKnown RBP eCLIP8.84□□□□□ -0.994e-6■■□□□ 14.1
TVP23C-208ENST00000581273 U2AF1Q01081 240 aaKnown RBP eCLIP8.84□□□□□ -0.99
TVP23C-208ENST00000581273 BMS1Q14692 1282 aaKnown RBP8.84□□□□□ -0.99
TVP23C-208ENST00000581273 AKAP4Q5JQC9 854 aa8.84□□□□□ -0.99
TVP23C-208ENST00000581273 GOLGA6L1Q8N7Z2 621 aa8.84□□□□□ -0.99
TVP23C-208ENST00000581273 SP7Q8TDD2 431 aaPredicted RBP8.84□□□□□ -0.99
TVP23C-208ENST00000581273 TMEM121BQ9BXQ6 578 aaPredicted RBP8.84□□□□□ -0.99
TVP23C-208ENST00000581273 ZBTB1Q9Y2K1 713 aa8.84□□□□□ -0.99
TVP23C-208ENST00000581273 ANKRD31Q8N7Z5 1873 aa8.83□□□□□ -1
TVP23C-208ENST00000581273 TRPM7Q96QT4 1865 aa8.83□□□□□ -1
TVP23C-208ENST00000581273 TULP2O00295 520 aa8.83□□□□□ -1
TVP23C-208ENST00000581273 RNMTO43148 476 aaKnown RBP8.83□□□□□ -1
TVP23C-208ENST00000581273 TNNT3P45378 269 aaPredicted RBP8.83□□□□□ -1
TVP23C-208ENST00000581273 TPM4P67936 248 aa8.83□□□□□ -1
TVP23C-208ENST00000581273 CST9Q5W186 159 aa8.83□□□□□ -1
TVP23C-208ENST00000581273 RPAP2Q8IXW5 612 aaPredicted RBP8.83□□□□□ -1
TVP23C-208ENST00000581273 TXLNBQ8N3L3 684 aa8.83□□□□□ -1
TVP23C-208ENST00000581273 DCBLD2Q96PD2 775 aa8.83□□□□□ -1
TVP23C-208ENST00000581273 TLL2Q9Y6L7 1015 aa8.83□□□□□ -1
TVP23C-208ENST00000581273 V9GYY5 206 aaPredicted RBP8.83□□□□□ -1
TVP23C-208ENST00000581273 CARMIL3Q8ND23 1372 aa8.83□□□□□ -1
TVP23C-208ENST00000581273 NRXN2Q9P2S2 1712 aa8.83□□□□□ -1
TVP23C-208ENST00000581273 ZBTB7BO15156 539 aaPredicted RBP8.82□□□□□ -1
TVP23C-208ENST00000581273 ATP8B1O43520 1251 aa8.82□□□□□ -1
TVP23C-208ENST00000581273 NRDCO43847 1150 aa8.82□□□□□ -1
TVP23C-208ENST00000581273 HMMRO75330 724 aa8.82□□□□□ -1
TVP23C-208ENST00000581273 TPM1P09493 284 aa8.82□□□□□ -1
TVP23C-208ENST00000581273 EPHX2P34913 555 aa8.82□□□□□ -1
TVP23C-208ENST00000581273 IL13P35225 146 aa8.82□□□□□ -1
TVP23C-208ENST00000581273 TMPOP42166 694 aaKnown RBP8.82□□□□□ -1
TVP23C-208ENST00000581273 NOM1Q5C9Z4 860 aaKnown RBP8.82□□□□□ -1
TVP23C-208ENST00000581273 AXDND1Q5T1B0 1012 aaPredicted RBP8.82□□□□□ -1
TVP23C-208ENST00000581273 CTU1Q7Z7A3 348 aaKnown RBP8.82□□□□□ -1
TVP23C-208ENST00000581273 TEX2Q8IWB9 1127 aa8.82□□□□□ -1
TVP23C-208ENST00000581273 KIF18AQ8NI77 898 aa8.82□□□□□ -1
TVP23C-208ENST00000581273 KCNV2Q8TDN2 545 aa8.82□□□□□ -1
TVP23C-208ENST00000581273 IL17RAQ96F46 866 aa8.82□□□□□ -1
TVP23C-208ENST00000581273 ERO1AQ96HE7 468 aa8.82□□□□□ -1
TVP23C-208ENST00000581273 ARGLU1Q9NWB6 273 aaPredicted RBP8.82□□□□□ -1
TVP23C-208ENST00000581273 TBC1D2BQ9UPU7 963 aa8.82□□□□□ -1
TVP23C-208ENST00000581273 TNNQ9UQP3 1299 aa8.82□□□□□ -1
TVP23C-208ENST00000581273 RRP7AQ9Y3A4 280 aaKnown RBP8.82□□□□□ -1
TVP23C-208ENST00000581273 FER1L6Q2WGJ9 1857 aa8.82□□□□□ -1
TVP23C-208ENST00000581273 SLX4Q8IY92 1834 aa8.82□□□□□ -1
TVP23C-208ENST00000581273 VCANP13611 3396 aa8.81□□□□□ -1
TVP23C-208ENST00000581273 COL11A2P13942 1736 aaPredicted RBP8.81□□□□□ -1
TVP23C-208ENST00000581273 TRAF5O00463 557 aa8.81□□□□□ -1
TVP23C-208ENST00000581273 STARD3NLO95772 234 aa8.81□□□□□ -1
TVP23C-208ENST00000581273 NCBP1Q09161 790 aaKnown RBP8.81□□□□□ -1
TVP23C-208ENST00000581273 LMOD3Q0VAK6 560 aa8.81□□□□□ -1
TVP23C-208ENST00000581273 TBC1D9BQ66K14 1250 aa8.81□□□□□ -1
TVP23C-208ENST00000581273 MICALL2Q8IY33 904 aa8.81□□□□□ -1
TVP23C-208ENST00000581273 TTC5Q8N0Z6 440 aa8.81□□□□□ -1
TVP23C-208ENST00000581273 L3MBTL3Q96JM7 780 aaPredicted RBP8.81□□□□□ -1
TVP23C-208ENST00000581273 DCTPP1Q9H773 170 aa8.81□□□□□ -1
TVP23C-208ENST00000581273 TTC12Q9H892 705 aaPredicted RBP8.81□□□□□ -1
TVP23C-208ENST00000581273 RAPGEFL1Q9UHV5 662 aa8.81□□□□□ -1
TVP23C-208ENST00000581273 HACL1Q9UJ83 578 aa8.81□□□□□ -1
TVP23C-208ENST00000581273 ZDHHC9Q9Y397 364 aa8.81□□□□□ -1
TVP23C-208ENST00000581273 CEP290O15078 2479 aa8.81□□□□□ -1
TVP23C-208ENST00000581273 BRCA2P51587 3418 aa8.8□□□□□ -1
TVP23C-208ENST00000581273 A0A087WZG4 1122 aa8.8□□□□□ -1
TVP23C-208ENST00000581273 CCP110O43303 1012 aa8.8□□□□□ -1
TVP23C-208ENST00000581273 TNNT1P13805 278 aa8.8□□□□□ -1
TVP23C-208ENST00000581273 CDC25BP30305 580 aa8.8□□□□□ -1
TVP23C-208ENST00000581273 PDE6BP35913 854 aa8.8□□□□□ -1
TVP23C-208ENST00000581273 MTHFSDQ2M296 383 aaKnown RBP8.8□□□□□ -1
TVP23C-208ENST00000581273 PLEKHM2Q8IWE5 1019 aa8.8□□□□□ -1
TVP23C-208ENST00000581273 FAM200AQ8TCP9 573 aa8.8□□□□□ -1
TVP23C-208ENST00000581273 SLC39A7Q92504 469 aa8.8□□□□□ -1
TVP23C-208ENST00000581273 TMX3Q96JJ7 454 aa8.8□□□□□ -1
TVP23C-208ENST00000581273 NOL10Q9BSC4 688 aaKnown RBP8.8□□□□□ -1
TVP23C-208ENST00000581273 TAOK3Q9H2K8 898 aa8.8□□□□□ -1
TVP23C-208ENST00000581273 ELP1O95163 1332 aa8.8□□□□□ -1
TVP23C-208ENST00000581273 GNAI1P63096 354 aa8.79□□□□□ -1
TVP23C-208ENST00000581273 E2F4Q16254 413 aa8.79□□□□□ -1
TVP23C-208ENST00000581273 MUM1L1Q5H9M0 696 aa8.79□□□□□ -1
TVP23C-208ENST00000581273 PRR5LQ6MZQ0 368 aa8.79□□□□□ -1
TVP23C-208ENST00000581273 LARP6Q9BRS8 491 aaKnown RBP8.79□□□□□ -1
TVP23C-208ENST00000581273 BRIP1Q9BX63 1249 aa8.79□□□□□ -1
TVP23C-208ENST00000581273 BRMS1Q9HCU9 246 aa8.79□□□□□ -1
TVP23C-208ENST00000581273 PRDM6Q9NQX0 595 aa8.79□□□□□ -1
TVP23C-208ENST00000581273 GPHNQ9NQX3 736 aaPredicted RBP8.79□□□□□ -1
TVP23C-208ENST00000581273 IFT57Q9NWB7 429 aa8.79□□□□□ -1
TVP23C-208ENST00000581273 FAM53CQ9NYF3 392 aa8.79□□□□□ -1
TVP23C-208ENST00000581273 ABCC4O15439 1325 aa8.79□□□□□ -1
TVP23C-208ENST00000581273 UBR2Q8IWV8 1755 aa8.78□□□□□ -1
TVP23C-208ENST00000581273 POTEFA5A3E0 1075 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms