RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 EYA2O00167 538 aa12.27□□□□□ -0.45
GGA3-209ENST00000580646 TTLL5Q6EMB2 1281 aa12.27□□□□□ -0.45
GGA3-209ENST00000580646 MXD3Q9BW11 206 aa12.27□□□□□ -0.45
GGA3-209ENST00000580646 ZNF408Q9H9D4 720 aa12.27□□□□□ -0.45
GGA3-209ENST00000580646 CD209Q9NNX6 404 aa12.27□□□□□ -0.45
GGA3-209ENST00000580646 MYH13Q9UKX3 1938 aa12.27□□□□□ -0.45
GGA3-209ENST00000580646 PNMA6EA0A0J9YXQ4 647 aa12.26□□□□□ -0.45
GGA3-209ENST00000580646 FOXN1O15353 648 aa12.26□□□□□ -0.45
GGA3-209ENST00000580646 IL15P40933 162 aaPredicted RBP12.26□□□□□ -0.45
GGA3-209ENST00000580646 GTF2IP78347 998 aa12.26□□□□□ -0.45
GGA3-209ENST00000580646 SCARF1Q14162 830 aa12.26□□□□□ -0.45
GGA3-209ENST00000580646 DLK2Q6UY11 383 aa12.26□□□□□ -0.45
GGA3-209ENST00000580646 PUS3Q9BZE2 481 aaKnown RBP12.26□□□□□ -0.45
GGA3-209ENST00000580646 C1orf115Q9H7X2 142 aa12.26□□□□□ -0.45
GGA3-209ENST00000580646 MYOZ2Q9NPC6 264 aa12.26□□□□□ -0.45
GGA3-209ENST00000580646 GGA3Q9NZ52 723 aa12.26□□□□□ -0.45
GGA3-209ENST00000580646 ASTN2O75129 1339 aaPredicted RBP12.26□□□□□ -0.45
GGA3-209ENST00000580646 MYO3BQ8WXR4 1341 aa12.26□□□□□ -0.45
GGA3-209ENST00000580646 WDR33Q9C0J8 1336 aaKnown RBP12.26□□□□□ -0.45
GGA3-209ENST00000580646 IRS2Q9Y4H2 1338 aa12.26□□□□□ -0.45
GGA3-209ENST00000580646 ZNF646O15015 1829 aaPredicted RBP12.25□□□□□ -0.45
GGA3-209ENST00000580646 ADM5C9JUS6 153 aa12.25□□□□□ -0.45
GGA3-209ENST00000580646 HMMRO75330 724 aa12.25□□□□□ -0.45
GGA3-209ENST00000580646 ECE1P42892 770 aa12.25□□□□□ -0.45
GGA3-209ENST00000580646 UBE4AQ14139 1066 aa12.25□□□□□ -0.45
GGA3-209ENST00000580646 CYP4F22Q6NT55 531 aa12.25□□□□□ -0.45
GGA3-209ENST00000580646 PAXIP1Q6ZW49 1069 aaPredicted RBP12.25□□□□□ -0.45
GGA3-209ENST00000580646 ATG9AQ7Z3C6 839 aa12.25□□□□□ -0.45
GGA3-209ENST00000580646 SAPCD2Q86UD0 394 aa12.25□□□□□ -0.45
GGA3-209ENST00000580646 SULF1Q8IWU6 871 aa12.25□□□□□ -0.45
GGA3-209ENST00000580646 OGFOD1Q8N543 542 aa12.25□□□□□ -0.45
GGA3-209ENST00000580646 VGLL2Q8N8G2 317 aa12.25□□□□□ -0.45
GGA3-209ENST00000580646 CAPNS2Q96L46 248 aa12.25□□□□□ -0.45
GGA3-209ENST00000580646 CRBNQ96SW2 442 aa12.25□□□□□ -0.45
GGA3-209ENST00000580646 NOP58Q9Y2X3 529 aaKnown RBP12.25□□□□□ -0.45
GGA3-209ENST00000580646 PDE8BO95263 885 aa12.24□□□□□ -0.45
GGA3-209ENST00000580646 IL1R1P14778 569 aa12.24□□□□□ -0.45
GGA3-209ENST00000580646 MMP14P50281 582 aa12.24□□□□□ -0.45
GGA3-209ENST00000580646 LRRC24Q50LG9 513 aa12.24□□□□□ -0.45
GGA3-209ENST00000580646 ANGEL2Q5VTE6 544 aaKnown RBP12.24□□□□□ -0.45
GGA3-209ENST00000580646 ZNF804AQ7Z570 1209 aa12.24□□□□□ -0.45
GGA3-209ENST00000580646 KLHDC4Q8TBB5 520 aa12.24□□□□□ -0.45
GGA3-209ENST00000580646 GRM1Q13255 1194 aa12.23□□□□□ -0.45
GGA3-209ENST00000580646 NBPF9Q3BBW0 867 aa12.23□□□□□ -0.45
GGA3-209ENST00000580646 HSP90AB4PQ58FF6 505 aa12.23□□□□□ -0.45
GGA3-209ENST00000580646 METTL24Q5JXM2 366 aa12.23□□□□□ -0.45
GGA3-209ENST00000580646 KIAA0825Q8IV33 1275 aa12.23□□□□□ -0.45
GGA3-209ENST00000580646 SIRT2Q8IXJ6 389 aa12.23□□□□□ -0.45
GGA3-209ENST00000580646 HHIPL1Q96JK4 782 aa12.23□□□□□ -0.45
GGA3-209ENST00000580646 WBP1LQ9NX94 342 aa12.23□□□□□ -0.45
GGA3-209ENST00000580646 HDAC9Q9UKV0 1011 aa12.23□□□□□ -0.45
GGA3-209ENST00000580646 PA2G4Q9UQ80 394 aaKnown RBP12.23□□□□□ -0.45
GGA3-209ENST00000580646 PITPNM2Q9BZ72 1349 aa12.22□□□□□ -0.45
GGA3-209ENST00000580646 WNT10BO00744 389 aa12.22□□□□□ -0.45
GGA3-209ENST00000580646 ZBTB22O15209 634 aa12.22□□□□□ -0.45
GGA3-209ENST00000580646 HUNKP57058 714 aa12.22□□□□□ -0.45
GGA3-209ENST00000580646 MAP2K1Q02750 393 aaPredicted RBP12.22□□□□□ -0.45
GGA3-209ENST00000580646 G3BP1Q13283 466 aaKnown RBP eCLIP12.22□□□□□ -0.45
GGA3-209ENST00000580646 PUM3Q15397 648 aaKnown RBP12.22□□□□□ -0.45
GGA3-209ENST00000580646 C2orf69Q8N8R5 385 aa12.22□□□□□ -0.45
GGA3-209ENST00000580646 AIDAQ96BJ3 306 aa12.22□□□□□ -0.45
GGA3-209ENST00000580646 FAM84BQ96KN1 310 aaPredicted RBP12.22□□□□□ -0.45
GGA3-209ENST00000580646 GBA2Q9HCG7 927 aaPredicted RBP12.22□□□□□ -0.45
GGA3-209ENST00000580646 SASH1O94885 1247 aa12.21□□□□□ -0.45
GGA3-209ENST00000580646 FGFR2P21802 821 aa12.21□□□□□ -0.45
GGA3-209ENST00000580646 HIBADHP31937 336 aaKnown RBP12.21□□□□□ -0.45
GGA3-209ENST00000580646 MAP2K2P36507 400 aa12.21□□□□□ -0.45
GGA3-209ENST00000580646 GYG1P46976 350 aa12.21□□□□□ -0.45
GGA3-209ENST00000580646 FKBP1AP62942 108 aaKnown RBP12.21□□□□□ -0.45
GGA3-209ENST00000580646 ERC1Q8IUD2 1116 aa12.21□□□□□ -0.45
GGA3-209ENST00000580646 CERS5Q8N5B7 392 aa12.21□□□□□ -0.45
GGA3-209ENST00000580646 TDRD7Q8NHU6 1098 aaKnown RBP12.21□□□□□ -0.45
GGA3-209ENST00000580646 CDCA5Q96FF9 252 aa12.21□□□□□ -0.45
GGA3-209ENST00000580646 SIL1Q9H173 461 aa12.21□□□□□ -0.45
GGA3-209ENST00000580646 GPR108Q9NPR9 543 aa12.21□□□□□ -0.45
GGA3-209ENST00000580646 CEP126Q9P2H0 1117 aa12.21□□□□□ -0.45
GGA3-209ENST00000580646 AOC2O75106 756 aa12.2□□□□□ -0.46
GGA3-209ENST00000580646 SURF6O75683 361 aaKnown RBP12.2□□□□□ -0.46
GGA3-209ENST00000580646 CTCFP49711 727 aaPredicted RBP12.2□□□□□ -0.46
GGA3-209ENST00000580646 LPIN2Q92539 896 aa12.2□□□□□ -0.46
GGA3-209ENST00000580646 ZBED3Q96IU2 234 aaPredicted RBP12.2□□□□□ -0.46
GGA3-209ENST00000580646 JAG2Q9Y219 1238 aa12.2□□□□□ -0.46
GGA3-209ENST00000580646 AKAP2Q9Y2D5 859 aa12.2□□□□□ -0.46
GGA3-209ENST00000580646 TRPM7Q96QT4 1865 aa12.2□□□□□ -0.46
GGA3-209ENST00000580646 FAM205AQ6ZU69 1335 aa12.19□□□□□ -0.46
GGA3-209ENST00000580646 RAB11FIP3O75154 756 aa12.19□□□□□ -0.46
GGA3-209ENST00000580646 IFIT1P09914 478 aaKnown RBP12.19□□□□□ -0.46
GGA3-209ENST00000580646 DLGAP5Q15398 846 aa12.19□□□□□ -0.46
GGA3-209ENST00000580646 FBXO33Q7Z6M2 555 aa12.19□□□□□ -0.46
GGA3-209ENST00000580646 EXOC6Q8TAG9 804 aa12.19□□□□□ -0.46
GGA3-209ENST00000580646 SCAF8Q9UPN6 1271 aaKnown RBP12.19□□□□□ -0.46
GGA3-209ENST00000580646 PCDHB15Q9Y5E8 787 aa12.19□□□□□ -0.46
GGA3-209ENST00000580646 GTF3C3Q9Y5Q9 886 aa12.19□□□□□ -0.46
GGA3-209ENST00000580646 F8W031 263 aaPredicted RBP12.18□□□□□ -0.46
GGA3-209ENST00000580646 SLC5A1P13866 664 aa12.18□□□□□ -0.46
GGA3-209ENST00000580646 HDAC1Q13547 482 aaPredicted RBP12.18□□□□□ -0.46
GGA3-209ENST00000580646 ATP2B3Q16720 1220 aa12.18□□□□□ -0.46
GGA3-209ENST00000580646 CAVIN4Q5BKX8 364 aa12.18□□□□□ -0.46
GGA3-209ENST00000580646 PRAMEF18Q5VWM3 479 aa12.18□□□□□ -0.46
GGA3-209ENST00000580646 RGMBQ6NW40 437 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms