RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 RASGRF1Q13972 1273 aa19.42■□□□□ 0.7
CSNK1D-212ENST00000580061 NIM1KQ8IY84 436 aa19.42■□□□□ 0.7
CSNK1D-212ENST00000580061 JDP2Q8WYK2 163 aa19.42■□□□□ 0.7
CSNK1D-212ENST00000580061 YDJCA8MPS7 323 aa19.41■□□□□ 0.7
CSNK1D-212ENST00000580061 ERC2O15083 957 aa19.41■□□□□ 0.7
CSNK1D-212ENST00000580061 FRAT2O75474 233 aaPredicted RBP19.41■□□□□ 0.7
CSNK1D-212ENST00000580061 GLRX3O76003 335 aaKnown RBP19.41■□□□□ 0.7
CSNK1D-212ENST00000580061 BOLA2Q9H3K6 86 aa19.41■□□□□ 0.7
CSNK1D-212ENST00000580061 HMG20BQ9P0W2 317 aa19.41■□□□□ 0.7
CSNK1D-212ENST00000580061 DENND2AQ9ULE3 1009 aa19.41■□□□□ 0.7
CSNK1D-212ENST00000580061 ZNRF3Q9ULT6 936 aa19.41■□□□□ 0.7
CSNK1D-212ENST00000580061 MYO5AQ9Y4I1 1855 aaKnown RBP19.41■□□□□ 0.7
CSNK1D-212ENST00000580061 DCAF8L1A6NGE4 600 aa19.4■□□□□ 0.7
CSNK1D-212ENST00000580061 RGS3P49796 1198 aa19.4■□□□□ 0.7
CSNK1D-212ENST00000580061 SPATA5Q8NB90 893 aa19.4■□□□□ 0.7
CSNK1D-212ENST00000580061 PDS5AQ29RF7 1337 aaKnown RBP19.4■□□□□ 0.7
CSNK1D-212ENST00000580061 AK9Q5TCS8 1911 aa19.39■□□□□ 0.7
CSNK1D-212ENST00000580061 PI16Q6UXB8 463 aa19.39■□□□□ 0.69
CSNK1D-212ENST00000580061 HAUS7Q99871 368 aa19.39■□□□□ 0.69
CSNK1D-212ENST00000580061 KCNQ5Q9NR82 932 aa19.39■□□□□ 0.69
CSNK1D-212ENST00000580061 SNRKQ9NRH2 765 aa19.39■□□□□ 0.69
CSNK1D-212ENST00000580061 RNF181Q9P0P0 153 aa19.39■□□□□ 0.69
CSNK1D-212ENST00000580061 FAM205AQ6ZU69 1335 aa19.39■□□□□ 0.69
CSNK1D-212ENST00000580061 DOCK2Q92608 1830 aa19.39■□□□□ 0.69
CSNK1D-212ENST00000580061 FZD9O00144 591 aa19.38■□□□□ 0.69
CSNK1D-212ENST00000580061 ZAP70P43403 619 aa19.38■□□□□ 0.69
CSNK1D-212ENST00000580061 GTF2IP78347 998 aa19.38■□□□□ 0.69
CSNK1D-212ENST00000580061 C9orf131Q5VYM1 1079 aa19.38■□□□□ 0.69
CSNK1D-212ENST00000580061 NDUFB9Q9Y6M9 179 aa19.38■□□□□ 0.69
CSNK1D-212ENST00000580061 CHAF1AQ13111 956 aaPredicted RBP19.37■□□□□ 0.69
CSNK1D-212ENST00000580061 STRIP1Q5VSL9 837 aa19.37■□□□□ 0.69
CSNK1D-212ENST00000580061 TTLL5Q6EMB2 1281 aa19.37■□□□□ 0.69
CSNK1D-212ENST00000580061 DNAJC2Q99543 621 aaKnown RBP19.37■□□□□ 0.69
CSNK1D-212ENST00000580061 JAG2Q9Y219 1238 aa19.37■□□□□ 0.69
CSNK1D-212ENST00000580061 MYH7P12883 1935 aa19.36■□□□□ 0.69
CSNK1D-212ENST00000580061 USP17L3A6NCW0 530 aa19.36■□□□□ 0.69
CSNK1D-212ENST00000580061 USP17L4A6NCW7 530 aa19.36■□□□□ 0.69
CSNK1D-212ENST00000580061 CYP2E1P05181 493 aaPredicted RBP19.36■□□□□ 0.69
CSNK1D-212ENST00000580061 TTC22Q5TAA0 569 aa19.36■□□□□ 0.69
CSNK1D-212ENST00000580061 USP17L1Q7RTZ2 530 aa19.36■□□□□ 0.69
CSNK1D-212ENST00000580061 WDR66Q8TBY9 1149 aa19.36■□□□□ 0.69
CSNK1D-212ENST00000580061 SALL1Q9NSC2 1324 aa19.35■□□□□ 0.69
CSNK1D-212ENST00000580061 RAD17O75943 681 aa19.35■□□□□ 0.69
CSNK1D-212ENST00000580061 GSPT1P15170 499 aaKnown RBP19.35■□□□□ 0.69
CSNK1D-212ENST00000580061 CXCL9Q07325 125 aa19.35■□□□□ 0.69
CSNK1D-212ENST00000580061 DACT2Q5SW24 774 aa19.35■□□□□ 0.69
CSNK1D-212ENST00000580061 FBXW7Q969H0 707 aa19.35■□□□□ 0.69
CSNK1D-212ENST00000580061 EDC3Q96F86 508 aaKnown RBP19.35■□□□□ 0.69
CSNK1D-212ENST00000580061 PAG1Q9NWQ8 432 aa19.35■□□□□ 0.69
CSNK1D-212ENST00000580061 GOLIM4O00461 696 aa19.34■□□□□ 0.69
CSNK1D-212ENST00000580061 MAP4K4O95819 1239 aaPredicted RBP19.34■□□□□ 0.69
CSNK1D-212ENST00000580061 EIF6P56537 245 aaKnown RBP19.34■□□□□ 0.69
CSNK1D-212ENST00000580061 FKBP1AP62942 108 aaKnown RBP19.34■□□□□ 0.69
CSNK1D-212ENST00000580061 CIAPIN1Q6FI81 312 aa19.34■□□□□ 0.69
CSNK1D-212ENST00000580061 TBC1D22AQ8WUA7 517 aa19.34■□□□□ 0.69
CSNK1D-212ENST00000580061 ANTXR1Q9H6X2 564 aa19.34■□□□□ 0.69
CSNK1D-212ENST00000580061 PSMD14O00487 310 aa19.33■□□□□ 0.68
CSNK1D-212ENST00000580061 VIL1P09327 827 aaKnown RBP19.33■□□□□ 0.68
CSNK1D-212ENST00000580061 TTF1Q15361 905 aaPredicted RBP19.33■□□□□ 0.68
CSNK1D-212ENST00000580061 MFSD14BQ5SR56 506 aa19.33■□□□□ 0.68
CSNK1D-212ENST00000580061 TBC1D9Q6ZT07 1266 aa19.33■□□□□ 0.68
CSNK1D-212ENST00000580061 ZGPATQ8N5A5 531 aaKnown RBP19.33■□□□□ 0.68
CSNK1D-212ENST00000580061 MAST2Q6P0Q8 1798 aa19.32■□□□□ 0.68
CSNK1D-212ENST00000580061 ZNF541Q9H0D2 1346 aa19.32■□□□□ 0.68
CSNK1D-212ENST00000580061 ZC3H4Q9UPT8 1303 aaKnown RBP19.32■□□□□ 0.68
CSNK1D-212ENST00000580061 TNIP1Q15025 636 aa19.32■□□□□ 0.68
CSNK1D-212ENST00000580061 CERS5Q8N5B7 392 aa19.32■□□□□ 0.68
CSNK1D-212ENST00000580061 MXD3Q9BW11 206 aa19.32■□□□□ 0.68
CSNK1D-212ENST00000580061 PIH1D3Q9NQM4 214 aaKnown RBP19.32■□□□□ 0.68
CSNK1D-212ENST00000580061 ABCF2Q9UG63 623 aa19.32■□□□□ 0.68
CSNK1D-212ENST00000580061 TRIM6-TRIM34B2RNG4 842 aa19.31■□□□□ 0.68
CSNK1D-212ENST00000580061 BMP2KLQ5H9B9 411 aa19.31■□□□□ 0.68
CSNK1D-212ENST00000580061 RSBN1LQ6PCB5 846 aaPredicted RBP19.31■□□□□ 0.68
CSNK1D-212ENST00000580061 CNTROBQ8N137 903 aa19.31■□□□□ 0.68
CSNK1D-212ENST00000580061 EVI5LQ96CN4 794 aa19.31■□□□□ 0.68
CSNK1D-212ENST00000580061 MYO3BQ8WXR4 1341 aa19.3■□□□□ 0.68
CSNK1D-212ENST00000580061 GRIK5Q16478 980 aa19.3■□□□□ 0.68
CSNK1D-212ENST00000580061 KBTBD3Q8NAB2 608 aa19.3■□□□□ 0.68
CSNK1D-212ENST00000580061 SUGT1Q9Y2Z0 365 aa19.3■□□□□ 0.68
CSNK1D-212ENST00000580061 SDSP20132 328 aa19.29■□□□□ 0.68
CSNK1D-212ENST00000580061 PRDX5P30044 214 aa19.29■□□□□ 0.68
CSNK1D-212ENST00000580061 SPTY2D1Q68D10 685 aaPredicted RBP19.29■□□□□ 0.68
CSNK1D-212ENST00000580061 ERICH6Q7L0X2 663 aa19.29■□□□□ 0.68
CSNK1D-212ENST00000580061 RILPL2Q969X0 211 aa19.29■□□□□ 0.68
CSNK1D-212ENST00000580061 LRP2BPQ9P2M1 347 aa19.29■□□□□ 0.68
CSNK1D-212ENST00000580061 ZBTB12Q9Y330 459 aaPredicted RBP19.29■□□□□ 0.68
CSNK1D-212ENST00000580061 MYH2Q9UKX2 1941 aa19.29■□□□□ 0.68
CSNK1D-212ENST00000580061 IGSF3O75054 1194 aa19.28■□□□□ 0.68
CSNK1D-212ENST00000580061 LDHBP07195 334 aaKnown RBP19.28■□□□□ 0.68
CSNK1D-212ENST00000580061 GPC2Q8N158 579 aa19.28■□□□□ 0.68
CSNK1D-212ENST00000580061 AGBL3Q8NEM8 1001 aa19.28■□□□□ 0.68
CSNK1D-212ENST00000580061 GMLQ99445 158 aa19.28■□□□□ 0.68
CSNK1D-212ENST00000580061 GJA3Q9Y6H8 435 aa19.28■□□□□ 0.68
CSNK1D-212ENST00000580061 IDH1O75874 414 aaKnown RBP19.27■□□□□ 0.68
CSNK1D-212ENST00000580061 MAP3K12Q12852 859 aa19.27■□□□□ 0.68
CSNK1D-212ENST00000580061 FSD1Q9BTV5 496 aa19.27■□□□□ 0.68
CSNK1D-212ENST00000580061 RAI14Q9P0K7 980 aa19.27■□□□□ 0.68
CSNK1D-212ENST00000580061 RPS12P25398 132 aaKnown RBP19.26■□□□□ 0.67
CSNK1D-212ENST00000580061 KIAA0825Q8IV33 1275 aa19.26■□□□□ 0.67
CSNK1D-212ENST00000580061 ZNF384Q8TF68 577 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms