RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 PCDHA7Q9UN72 937 aa15.88■□□□□ 0.13
NDEL1-204ENST00000578172 IFIT3O14879 490 aaKnown RBP15.88■□□□□ 0.13
NDEL1-204ENST00000578172 DPCR1Q3MIW9 517 aa15.88■□□□□ 0.13
NDEL1-204ENST00000578172 MRPS27Q92552 414 aaKnown RBP15.88■□□□□ 0.13
NDEL1-204ENST00000578172 COL15A1P39059 1388 aa15.87■□□□□ 0.13
NDEL1-204ENST00000578172 NRDCO43847 1150 aa15.87■□□□□ 0.13
NDEL1-204ENST00000578172 METAP2P50579 478 aaKnown RBP eCLIP15.87■□□□□ 0.13
NDEL1-204ENST00000578172 TPM4P67936 248 aa15.87■□□□□ 0.13
NDEL1-204ENST00000578172 CEP135Q66GS9 1140 aa15.87■□□□□ 0.13
NDEL1-204ENST00000578172 SMIM5Q71RC9 77 aa15.87■□□□□ 0.13
NDEL1-204ENST00000578172 MPHOSPH8Q99549 860 aa15.87■□□□□ 0.13
NDEL1-204ENST00000578172 ZNF827Q17R98 1081 aa15.87■□□□□ 0.13
NDEL1-204ENST00000578172 ZSCAN16Q9H4T2 348 aaPredicted RBP15.87■□□□□ 0.13
NDEL1-204ENST00000578172 SPTLC2O15270 562 aa15.87■□□□□ 0.13
NDEL1-204ENST00000578172 PRDM1O75626 825 aa15.87■□□□□ 0.13
NDEL1-204ENST00000578172 GREM2Q9H772 168 aa15.87■□□□□ 0.13
NDEL1-204ENST00000578172 KCNJ14Q9UNX9 436 aa15.87■□□□□ 0.13
NDEL1-204ENST00000578172 AGLP35573 1532 aa15.86■□□□□ 0.13
NDEL1-204ENST00000578172 ITGA6P23229 1130 aa15.86■□□□□ 0.13
NDEL1-204ENST00000578172 TMEM67Q5HYA8 995 aa15.86■□□□□ 0.13
NDEL1-204ENST00000578172 RASSF8Q8NHQ8 419 aa15.86■□□□□ 0.13
NDEL1-204ENST00000578172 NAT10Q9H0A0 1025 aaKnown RBP15.86■□□□□ 0.13
NDEL1-204ENST00000578172 NAPBQ9H115 298 aa15.86■□□□□ 0.13
NDEL1-204ENST00000578172 NUTM2BA6NNL0 878 aaPredicted RBP15.86■□□□□ 0.13
NDEL1-204ENST00000578172 NUTM2EB1AL46 878 aaPredicted RBP15.86■□□□□ 0.13
NDEL1-204ENST00000578172 NUTM2AQ8IVF1 878 aaPredicted RBP15.86■□□□□ 0.13
NDEL1-204ENST00000578172 LRP2BPQ9P2M1 347 aa15.86■□□□□ 0.13
NDEL1-204ENST00000578172 GOLGA8AA7E2F4 631 aa15.86■□□□□ 0.13
NDEL1-204ENST00000578172 CTDNEP1O95476 244 aa15.86■□□□□ 0.13
NDEL1-204ENST00000578172 VPS37DQ86XT2 251 aa15.86■□□□□ 0.13
NDEL1-204ENST00000578172 NCOA7Q8NI08 942 aa15.86■□□□□ 0.13
NDEL1-204ENST00000578172 STAMQ92783 540 aa15.86■□□□□ 0.13
NDEL1-204ENST00000578172 SENP2Q9HC62 589 aa15.86■□□□□ 0.13
NDEL1-204ENST00000578172 RFX5P48382 616 aaPredicted RBP15.85■□□□□ 0.13
NDEL1-204ENST00000578172 HLFQ16534 295 aa15.85■□□□□ 0.13
NDEL1-204ENST00000578172 ARMT1Q9H993 441 aa15.85■□□□□ 0.13
NDEL1-204ENST00000578172 PRIMPOLQ96LW4 560 aa15.85■□□□□ 0.13
NDEL1-204ENST00000578172 MON2Q7Z3U7 1717 aa15.85■□□□□ 0.13
NDEL1-204ENST00000578172 HMGB1P09429 215 aaKnown RBP15.85■□□□□ 0.13
NDEL1-204ENST00000578172 ATG9AQ7Z3C6 839 aa15.85■□□□□ 0.13
NDEL1-204ENST00000578172 CTNNA3Q9UI47 895 aa15.85■□□□□ 0.13
NDEL1-204ENST00000578172 MAGEB6Q8N7X4 407 aa15.84■□□□□ 0.13
NDEL1-204ENST00000578172 SFPQP23246 707 aaKnown RBP eCLIP15.84■□□□□ 0.13
NDEL1-204ENST00000578172 STX17P56962 302 aa15.84■□□□□ 0.13
NDEL1-204ENST00000578172 SYT10Q6XYQ8 523 aa15.84■□□□□ 0.13
NDEL1-204ENST00000578172 TRMT44Q8IYL2 757 aaKnown RBP15.84■□□□□ 0.13
NDEL1-204ENST00000578172 FUCA2Q9BTY2 467 aa15.84■□□□□ 0.13
NDEL1-204ENST00000578172 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.84■□□□□ 0.13
NDEL1-204ENST00000578172 DHX16O60231 1041 aaKnown RBP15.84■□□□□ 0.13
NDEL1-204ENST00000578172 PHKA1P46020 1223 aa15.84■□□□□ 0.13
NDEL1-204ENST00000578172 FOXO4P98177 505 aa15.84■□□□□ 0.13
NDEL1-204ENST00000578172 XPO4Q9C0E2 1151 aaKnown RBP15.84■□□□□ 0.13
NDEL1-204ENST00000578172 RAI14Q9P0K7 980 aa15.84■□□□□ 0.13
NDEL1-204ENST00000578172 PFKFB2O60825 505 aa15.83■□□□□ 0.13
NDEL1-204ENST00000578172 AKAP17AQ02040 695 aaKnown RBP15.83■□□□□ 0.13
NDEL1-204ENST00000578172 FAM160A1Q05DH4 1040 aa15.83■□□□□ 0.13
NDEL1-204ENST00000578172 PNOCQ13519 176 aa15.83■□□□□ 0.13
NDEL1-204ENST00000578172 LRRFIP1Q32MZ4 808 aaKnown RBP15.83■□□□□ 0.13
NDEL1-204ENST00000578172 TPM3P06753 285 aa15.83■□□□□ 0.12
NDEL1-204ENST00000578172 ATP1A3P13637 1013 aa15.83■□□□□ 0.12
NDEL1-204ENST00000578172 SYKP43405 635 aa15.83■□□□□ 0.12
NDEL1-204ENST00000578172 AFMP43652 599 aa15.83■□□□□ 0.12
NDEL1-204ENST00000578172 GPIHBP1Q8IV16 184 aa15.83■□□□□ 0.12
NDEL1-204ENST00000578172 ZNF710Q8N1W2 664 aa15.83■□□□□ 0.12
NDEL1-204ENST00000578172 BBXQ8WY36 941 aaPredicted RBP15.83■□□□□ 0.12
NDEL1-204ENST00000578172 IRS4O14654 1257 aaPredicted RBP15.83■□□□□ 0.12
NDEL1-204ENST00000578172 IARSP41252 1262 aaKnown RBP15.83■□□□□ 0.12
NDEL1-204ENST00000578172 TMEM94Q12767 1356 aa15.83■□□□□ 0.12
NDEL1-204ENST00000578172 ANKRD18BA2A2Z9 1011 aa15.82■□□□□ 0.12
NDEL1-204ENST00000578172 PRKAB2O43741 272 aa15.82■□□□□ 0.12
NDEL1-204ENST00000578172 ZMYM1Q5SVZ6 1142 aa15.82■□□□□ 0.12
NDEL1-204ENST00000578172 GRAMD1CQ8IYS0 662 aa15.82■□□□□ 0.12
NDEL1-204ENST00000578172 CNNM3Q8NE01 707 aa15.82■□□□□ 0.12
NDEL1-204ENST00000578172 URI1O94763 535 aaPredicted RBP15.82■□□□□ 0.12
NDEL1-204ENST00000578172 ZNF202O95125 648 aa15.82■□□□□ 0.12
NDEL1-204ENST00000578172 ZNF532Q9HCE3 1301 aa15.82■□□□□ 0.12
NDEL1-204ENST00000578172 MBD4O95243 580 aa15.82■□□□□ 0.12
NDEL1-204ENST00000578172 WWC3Q9ULE0 1092 aa15.82■□□□□ 0.12
NDEL1-204ENST00000578172 AKAP2Q9Y2D5 859 aa15.82■□□□□ 0.12
NDEL1-204ENST00000578172 SLC12A7Q9Y666 1083 aa15.82■□□□□ 0.12
NDEL1-204ENST00000578172 USP42Q9H9J4 1324 aaKnown RBP15.81■□□□□ 0.12
NDEL1-204ENST00000578172 IL2RBP14784 551 aa15.81■□□□□ 0.12
NDEL1-204ENST00000578172 ZNF215Q9UL58 517 aaPredicted RBP15.81■□□□□ 0.12
NDEL1-204ENST00000578172 MED23Q9ULK4 1368 aa15.81■□□□□ 0.12
NDEL1-204ENST00000578172 ERICH2A1L162 156 aa15.81■□□□□ 0.12
NDEL1-204ENST00000578172 STARD3NLO95772 234 aa15.81■□□□□ 0.12
NDEL1-204ENST00000578172 ELF2Q15723 593 aa15.81■□□□□ 0.12
NDEL1-204ENST00000578172 OLFM4Q6UX06 510 aa15.81■□□□□ 0.12
NDEL1-204ENST00000578172 DNAI1Q9UI46 699 aa15.81■□□□□ 0.12
NDEL1-204ENST00000578172 RANBP6O60518 1105 aaKnown RBP15.81■□□□□ 0.12
NDEL1-204ENST00000578172 SAFBQ15424 915 aaKnown RBP eCLIP15.81■□□□□ 0.12
NDEL1-204ENST00000578172 HELLSQ9NRZ9 838 aa15.81■□□□□ 0.12
NDEL1-204ENST00000578172 CARMIL3Q8ND23 1372 aa15.8■□□□□ 0.12
NDEL1-204ENST00000578172 KIF28PB7ZC32 967 aa15.8■□□□□ 0.12
NDEL1-204ENST00000578172 ZBTB43O43298 467 aa15.8■□□□□ 0.12
NDEL1-204ENST00000578172 CCDC94Q9BW85 323 aaPredicted RBP15.8■□□□□ 0.12
NDEL1-204ENST00000578172 BAZ2BQ9UIF8 2168 aaKnown RBP15.8■□□□□ 0.12
NDEL1-204ENST00000578172 SKIDA1Q1XH10 827 aa15.8■□□□□ 0.12
NDEL1-204ENST00000578172 BTG4Q9NY30 223 aa15.8■□□□□ 0.12
NDEL1-204ENST00000578172 MYSM1Q5VVJ2 828 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms