RNA–Protein interactions for RNA: ENST00000577605.1

CASC3-205, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 714 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-205ENST00000577605 KIAA2012Q0VF49 1180 aa8.9□□□□□ -0.98
CASC3-205ENST00000577605 TNIP1Q15025 636 aa8.9□□□□□ -0.98
CASC3-205ENST00000577605 CWF19L2Q2TBE0 894 aaKnown RBP8.9□□□□□ -0.98
CASC3-205ENST00000577605 RTL5Q5HYW3 569 aaPredicted RBP8.9□□□□□ -0.98
CASC3-205ENST00000577605 UBE3BQ7Z3V4 1068 aa8.9□□□□□ -0.98
CASC3-205ENST00000577605 PNMA8AQ86V59 439 aaPredicted RBP8.9□□□□□ -0.98
CASC3-205ENST00000577605 SMC1BQ8NDV3 1235 aa8.9□□□□□ -0.98
CASC3-205ENST00000577605 TTLL11Q8NHH1 800 aa8.9□□□□□ -0.98
CASC3-205ENST00000577605 WNT2BQ93097 391 aa8.9□□□□□ -0.98
CASC3-205ENST00000577605 DDRGK1Q96HY6 314 aa8.9□□□□□ -0.98
CASC3-205ENST00000577605 NMRK2Q9NPI5 230 aa8.9□□□□□ -0.98
CASC3-205ENST00000577605 BSDC1Q9NW68 430 aaPredicted RBP8.9□□□□□ -0.98
CASC3-205ENST00000577605 C9orf78Q9NZ63 289 aaPredicted RBP8.9□□□□□ -0.98
CASC3-205ENST00000577605 ZNRF3Q9ULT6 936 aa8.9□□□□□ -0.98
CASC3-205ENST00000577605 NSFL1CQ9UNZ2 370 aaKnown RBP8.9□□□□□ -0.98
CASC3-205ENST00000577605 ARFGEF2Q9Y6D5 1785 aa8.9□□□□□ -0.98
CASC3-205ENST00000577605 ANKRD36CQ5JPF3 1778 aa8.89□□□□□ -0.99
CASC3-205ENST00000577605 ATP2B4P23634 1241 aa8.89□□□□□ -0.99
CASC3-205ENST00000577605 IGHMBP2P38935 993 aaKnown RBP8.89□□□□□ -0.99
CASC3-205ENST00000577605 PRSS12P56730 875 aa8.89□□□□□ -0.99
CASC3-205ENST00000577605 WASHC4Q2M389 1173 aa8.89□□□□□ -0.99
CASC3-205ENST00000577605 ARHGAP45Q92619 1136 aa8.89□□□□□ -0.99
CASC3-205ENST00000577605 CELF1Q92879 486 aaKnown RBP8.89□□□□□ -0.99
CASC3-205ENST00000577605 CDCA7LQ96GN5 454 aa8.89□□□□□ -0.99
CASC3-205ENST00000577605 TRAIPQ9BWF2 469 aa8.89□□□□□ -0.99
CASC3-205ENST00000577605 ZC3H12CQ9C0D7 883 aaKnown RBP8.89□□□□□ -0.99
CASC3-205ENST00000577605 ANKRD2Q9GZV1 360 aa8.89□□□□□ -0.99
CASC3-205ENST00000577605 TNRC6CQ9HCJ0 1690 aaKnown RBP8.88□□□□□ -0.99
CASC3-205ENST00000577605 ANKRD18BA2A2Z9 1011 aa8.88□□□□□ -0.99
CASC3-205ENST00000577605 GRM8O00222 908 aa8.88□□□□□ -0.99
CASC3-205ENST00000577605 IPO8O15397 1037 aaKnown RBP8.88□□□□□ -0.99
CASC3-205ENST00000577605 DDNO94850 711 aaPredicted RBP8.88□□□□□ -0.99
CASC3-205ENST00000577605 HSPA6P17066 643 aa8.88□□□□□ -0.99
CASC3-205ENST00000577605 LMOD1P29536 600 aaPredicted RBP8.88□□□□□ -0.99
CASC3-205ENST00000577605 CCT4P50991 539 aaKnown RBP8.88□□□□□ -0.99
CASC3-205ENST00000577605 APLP1P51693 650 aa8.88□□□□□ -0.99
CASC3-205ENST00000577605 CASP7P55210 303 aa8.88□□□□□ -0.99
CASC3-205ENST00000577605 OLFM4Q6UX06 510 aa8.88□□□□□ -0.99
CASC3-205ENST00000577605 THSD4Q6ZMP0 1018 aa8.88□□□□□ -0.99
CASC3-205ENST00000577605 KCTD17Q8N5Z5 321 aa8.88□□□□□ -0.99
CASC3-205ENST00000577605 SSH1Q8WYL5 1049 aa8.88□□□□□ -0.99
CASC3-205ENST00000577605 API5Q9BZZ5 524 aaKnown RBP8.88□□□□□ -0.99
CASC3-205ENST00000577605 SMC4Q9NTJ3 1288 aa8.88□□□□□ -0.99
CASC3-205ENST00000577605 ANKIB1Q9P2G1 1089 aa8.88□□□□□ -0.99
CASC3-205ENST00000577605 HACL1Q9UJ83 578 aa8.88□□□□□ -0.99
CASC3-205ENST00000577605 GGA1Q9UJY5 639 aa8.88□□□□□ -0.99
CASC3-205ENST00000577605 LEMD3Q9Y2U8 911 aa8.88□□□□□ -0.99
CASC3-205ENST00000577605 SLX4Q8IY92 1834 aa8.88□□□□□ -0.99
CASC3-205ENST00000577605 UTYO14607 1347 aa8.87□□□□□ -0.99
CASC3-205ENST00000577605 XDHP47989 1333 aa8.87□□□□□ -0.99
CASC3-205ENST00000577605 KIF16BQ96L93 1317 aa8.87□□□□□ -0.99
CASC3-205ENST00000577605 F6X3S4 739 aa8.87□□□□□ -0.99
CASC3-205ENST00000577605 C6orf229H3BNL8 230 aa8.87□□□□□ -0.99
CASC3-205ENST00000577605 MMP14P50281 582 aa8.87□□□□□ -0.99
CASC3-205ENST00000577605 PTPN5P54829 565 aa8.87□□□□□ -0.99
CASC3-205ENST00000577605 GPSM2P81274 684 aa8.87□□□□□ -0.99
CASC3-205ENST00000577605 IFIT5Q13325 482 aaKnown RBP8.87□□□□□ -0.99
CASC3-205ENST00000577605 AOC3Q16853 763 aa8.87□□□□□ -0.99
CASC3-205ENST00000577605 SLC4A10Q6U841 1118 aa8.87□□□□□ -0.99
CASC3-205ENST00000577605 LAPTM4BQ86VI4 370 aa8.87□□□□□ -0.99
CASC3-205ENST00000577605 PACS2Q86VP3 889 aa8.87□□□□□ -0.99
CASC3-205ENST00000577605 TBC1D16Q8TBP0 767 aa8.87□□□□□ -0.99
CASC3-205ENST00000577605 MPHOSPH8Q99549 860 aa8.87□□□□□ -0.99
CASC3-205ENST00000577605 FAM198AQ9UFP1 575 aa8.87□□□□□ -0.99
CASC3-205ENST00000577605 FER1L6Q2WGJ9 1857 aa8.87□□□□□ -0.99
CASC3-205ENST00000577605 POTECB2RU33 542 aa8.86□□□□□ -0.99
CASC3-205ENST00000577605 ITGA6P23229 1130 aa8.86□□□□□ -0.99
CASC3-205ENST00000577605 RPS12P25398 132 aaKnown RBP8.86□□□□□ -0.99
CASC3-205ENST00000577605 HNRNPUQ00839 825 aaKnown RBP eCLIP8.86□□□□□ -0.99
CASC3-205ENST00000577605 CCDC57Q2TAC2 916 aa8.86□□□□□ -0.99
CASC3-205ENST00000577605 CIAPIN1Q6FI81 312 aa8.86□□□□□ -0.99
CASC3-205ENST00000577605 USP50Q70EL3 339 aaPredicted RBP8.86□□□□□ -0.99
CASC3-205ENST00000577605 PODNQ7Z5L7 613 aa8.86□□□□□ -0.99
CASC3-205ENST00000577605 LDHDQ86WU2 507 aa8.86□□□□□ -0.99
CASC3-205ENST00000577605 TAF1DQ9H5J8 278 aaPredicted RBP8.86□□□□□ -0.99
CASC3-205ENST00000577605 GREM2Q9H772 168 aa8.86□□□□□ -0.99
CASC3-205ENST00000577605 SEC31BQ9NQW1 1179 aa8.86□□□□□ -0.99
CASC3-205ENST00000577605 NPDC1Q9NQX5 325 aaPredicted RBP8.86□□□□□ -0.99
CASC3-205ENST00000577605 MINPP1Q9UNW1 487 aa8.86□□□□□ -0.99
CASC3-205ENST00000577605 WDR90Q96KV7 1748 aa8.85□□□□□ -0.99
CASC3-205ENST00000577605 ZNF541Q9H0D2 1346 aa8.85□□□□□ -0.99
CASC3-205ENST00000577605 EPHX2P34913 555 aa8.85□□□□□ -0.99
CASC3-205ENST00000577605 RARSP54136 660 aaKnown RBP8.85□□□□□ -0.99
CASC3-205ENST00000577605 FOXO4P98177 505 aa8.85□□□□□ -0.99
CASC3-205ENST00000577605 CXCL9Q07325 125 aa8.85□□□□□ -0.99
CASC3-205ENST00000577605 ANKK1Q8NFD2 765 aa8.85□□□□□ -0.99
CASC3-205ENST00000577605 DPF2Q92785 391 aa8.85□□□□□ -0.99
CASC3-205ENST00000577605 JARID2Q92833 1246 aaPredicted RBP8.85□□□□□ -0.99
CASC3-205ENST00000577605 ZFRQ96KR1 1074 aaKnown RBP8.85□□□□□ -0.99
CASC3-205ENST00000577605 GOPCQ9HD26 462 aa8.85□□□□□ -0.99
CASC3-205ENST00000577605 POLLQ9UGP5 575 aa8.85□□□□□ -0.99
CASC3-205ENST00000577605 ZBED9Q6R2W3 1325 aa8.84□□□□□ -0.99
CASC3-205ENST00000577605 UFL1O94874 794 aa8.84□□□□□ -0.99
CASC3-205ENST00000577605 TAF7LQ5H9L4 462 aa8.84□□□□□ -0.99
CASC3-205ENST00000577605 LMBR1LQ6UX01 489 aa8.84□□□□□ -0.99
CASC3-205ENST00000577605 COA1Q9GZY4 146 aa8.84□□□□□ -0.99
CASC3-205ENST00000577605 ADARB2Q9NS39 739 aaKnown RBP8.84□□□□□ -0.99
CASC3-205ENST00000577605 NOB1Q9ULX3 412 aaKnown RBP8.84□□□□□ -0.99
CASC3-205ENST00000577605 GJA3Q9Y6H8 435 aa8.84□□□□□ -0.99
CASC3-205ENST00000577605 SBF1O95248 1867 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms