RNA–Protein interactions for RNA: ENST00000575049.1

TSR1-203, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 3

Gene TSR1, Length 387 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-203ENST00000575049 TRIM28Q13263 835 aaKnown RBP6.98□□□□□ -1.29
TSR1-203ENST00000575049 EAPPQ56P03 285 aaPredicted RBP6.98□□□□□ -1.29
TSR1-203ENST00000575049 PRRT3Q5FWE3 981 aa6.98□□□□□ -1.29
TSR1-203ENST00000575049 LDLRAD1Q5T700 205 aa6.98□□□□□ -1.29
TSR1-203ENST00000575049 ADAMTSL4Q6UY14 1074 aa6.98□□□□□ -1.29
TSR1-203ENST00000575049 TMEM151AQ8N4L1 468 aa6.98□□□□□ -1.29
TSR1-203ENST00000575049 TMEM102Q8N9M5 508 aaPredicted RBP6.98□□□□□ -1.29
TSR1-203ENST00000575049 NPHS2Q9NP85 383 aa6.98□□□□□ -1.29
TSR1-203ENST00000575049 TMA7Q9Y2S6 64 aaKnown RBP6.98□□□□□ -1.29
TSR1-203ENST00000575049 A0A0A0MRY4 1105 aa6.97□□□□□ -1.29
TSR1-203ENST00000575049 A0A1W2PP55 124 aa6.97□□□□□ -1.29
TSR1-203ENST00000575049 SPATA31C1P0DKV0 1188 aa6.97□□□□□ -1.29
TSR1-203ENST00000575049 PTPRAP18433 802 aa6.97□□□□□ -1.29
TSR1-203ENST00000575049 CDC27P30260 824 aa6.97□□□□□ -1.29
TSR1-203ENST00000575049 RAC1P63000 192 aa6.97□□□□□ -1.29
TSR1-203ENST00000575049 FMR1Q06787 632 aaKnown RBP eCLIP6.97□□□□□ -1.29
TSR1-203ENST00000575049 NXPE3Q969Y0 559 aa6.97□□□□□ -1.29
TSR1-203ENST00000575049 CCDC74AQ96AQ1 378 aa6.97□□□□□ -1.29
TSR1-203ENST00000575049 PNMA6FA0A0J9YX94 578 aa6.96□□□□□ -1.3
TSR1-203ENST00000575049 ENOX2Q16206 610 aaKnown RBP6.96□□□□□ -1.3
TSR1-203ENST00000575049 DTWD1Q8N5C7 304 aa6.96□□□□□ -1.3
TSR1-203ENST00000575049 MICAL1Q8TDZ2 1067 aa6.96□□□□□ -1.3
TSR1-203ENST00000575049 DHX38Q92620 1227 aaKnown RBP6.96□□□□□ -1.3
TSR1-203ENST00000575049 TINF2Q9BSI4 451 aa6.96□□□□□ -1.3
TSR1-203ENST00000575049 ADAM19Q9H013 955 aa6.96□□□□□ -1.3
TSR1-203ENST00000575049 PRKAG2Q9UGJ0 569 aa6.96□□□□□ -1.3
TSR1-203ENST00000575049 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.96□□□□□ -1.3
TSR1-203ENST00000575049 PPME1Q9Y570 386 aa6.96□□□□□ -1.3
TSR1-203ENST00000575049 KRBA1A5PL33 1030 aa6.95□□□□□ -1.3
TSR1-203ENST00000575049 RAB11FIP3O75154 756 aa6.95□□□□□ -1.3
TSR1-203ENST00000575049 MAPK8P45983 427 aa6.95□□□□□ -1.3
TSR1-203ENST00000575049 CCDC144BQ3MJ40 725 aa6.95□□□□□ -1.3
TSR1-203ENST00000575049 KIAA0319Q5VV43 1072 aa6.95□□□□□ -1.3
TSR1-203ENST00000575049 METTL16Q86W50 562 aaKnown RBP6.95□□□□□ -1.3
TSR1-203ENST00000575049 FMR1NBQ8N0W7 255 aaPredicted RBP6.95□□□□□ -1.3
TSR1-203ENST00000575049 SLC43A3Q8NBI5 491 aa6.95□□□□□ -1.3
TSR1-203ENST00000575049 UBE2Q2Q8WVN8 375 aa6.95□□□□□ -1.3
TSR1-203ENST00000575049 PSMD1Q99460 953 aa6.95□□□□□ -1.3
TSR1-203ENST00000575049 BHLHE41Q9C0J9 482 aaPredicted RBP6.95□□□□□ -1.3
TSR1-203ENST00000575049 MUC3BQ9H195 1237 aa6.95□□□□□ -1.3
TSR1-203ENST00000575049 SH2B1Q9NRF2 756 aaPredicted RBP6.95□□□□□ -1.3
TSR1-203ENST00000575049 FAM177BA6PVY3 158 aa6.94□□□□□ -1.3
TSR1-203ENST00000575049 P4HBP07237 508 aaKnown RBP6.94□□□□□ -1.3
TSR1-203ENST00000575049 ELNP15502 786 aa6.94□□□□□ -1.3
TSR1-203ENST00000575049 EPHA1P21709 976 aa6.94□□□□□ -1.3
TSR1-203ENST00000575049 EGFLAMQ63HQ2 1017 aa6.94□□□□□ -1.3
TSR1-203ENST00000575049 CCNJLQ8IV13 435 aa6.94□□□□□ -1.3
TSR1-203ENST00000575049 EPS8L3Q8TE67 593 aaKnown RBP6.94□□□□□ -1.3
TSR1-203ENST00000575049 EHD4Q9H223 541 aa6.94□□□□□ -1.3
TSR1-203ENST00000575049 LIN7BQ9HAP6 207 aa6.94□□□□□ -1.3
TSR1-203ENST00000575049 SOX13Q9UN79 622 aa6.94□□□□□ -1.3
TSR1-203ENST00000575049 METTL12A8MUP2 240 aa6.93□□□□□ -1.3
TSR1-203ENST00000575049 LINC01387J3KSC0 135 aa6.93□□□□□ -1.3
TSR1-203ENST00000575049 DEAF1O75398 565 aaPredicted RBP6.93□□□□□ -1.3
TSR1-203ENST00000575049 ATP2B1P20020 1258 aa6.93□□□□□ -1.3
TSR1-203ENST00000575049 CDC25BP30305 580 aa6.93□□□□□ -1.3
TSR1-203ENST00000575049 SETDB1Q15047 1291 aa6.93□□□□□ -1.3
TSR1-203ENST00000575049 GRIK4Q16099 956 aa6.93□□□□□ -1.3
TSR1-203ENST00000575049 SDE2Q6IQ49 451 aa6.93□□□□□ -1.3
TSR1-203ENST00000575049 TXNDC11Q6PKC3 985 aa6.93□□□□□ -1.3
TSR1-203ENST00000575049 FBXO11Q86XK2 927 aa6.93□□□□□ -1.3
TSR1-203ENST00000575049 NT5DC4Q86YG4 428 aa6.93□□□□□ -1.3
TSR1-203ENST00000575049 ASAP3Q8TDY4 903 aa6.93□□□□□ -1.3
TSR1-203ENST00000575049 BSNDQ8WZ55 320 aa6.93□□□□□ -1.3
TSR1-203ENST00000575049 GPATCH3Q96I76 525 aa6.93□□□□□ -1.3
TSR1-203ENST00000575049 TCF12Q99081 682 aa6.93□□□□□ -1.3
TSR1-203ENST00000575049 SRA1Q9HD15 236 aaKnown RBP6.93□□□□□ -1.3
TSR1-203ENST00000575049 H3BRJ5 948 aa6.92□□□□□ -1.3
TSR1-203ENST00000575049 GADD45BO75293 160 aaPredicted RBP6.92□□□□□ -1.3
TSR1-203ENST00000575049 GTF2F1P35269 517 aaKnown RBP eCLIP6.92□□□□□ -1.3
TSR1-203ENST00000575049 CABP4P57796 275 aa6.92□□□□□ -1.3
TSR1-203ENST00000575049 PI16Q6UXB8 463 aa6.92□□□□□ -1.3
TSR1-203ENST00000575049 MAP4K3Q8IVH8 894 aa6.92□□□□□ -1.3
TSR1-203ENST00000575049 SETDB2Q96T68 719 aa6.92□□□□□ -1.3
TSR1-203ENST00000575049 NLRP2Q9NX02 1062 aa6.92□□□□□ -1.3
TSR1-203ENST00000575049 TBX22Q9Y458 520 aa6.92□□□□□ -1.3
TSR1-203ENST00000575049 LOC102724159A0A0B4J2E5 919 aa6.91□□□□□ -1.3
TSR1-203ENST00000575049 PLEKHD1A6NEE1 506 aa6.91□□□□□ -1.3
TSR1-203ENST00000575049 APBA3O96018 575 aa6.91□□□□□ -1.3
TSR1-203ENST00000575049 GRIA4P48058 902 aa6.91□□□□□ -1.3
TSR1-203ENST00000575049 ATP2B2Q01814 1243 aa6.91□□□□□ -1.3
TSR1-203ENST00000575049 PWP2Q15269 919 aaKnown RBP6.91□□□□□ -1.3
TSR1-203ENST00000575049 PLA2G4EQ3MJ16 856 aa6.91□□□□□ -1.3
TSR1-203ENST00000575049 FAM117BQ6P1L5 589 aa6.91□□□□□ -1.3
TSR1-203ENST00000575049 VN1R5Q7Z5H4 357 aa6.91□□□□□ -1.3
TSR1-203ENST00000575049 FBF1Q8TES7 1133 aa6.91□□□□□ -1.3
TSR1-203ENST00000575049 ARMC5Q96C12 935 aa6.91□□□□□ -1.3
TSR1-203ENST00000575049 NACC1Q96RE7 527 aa6.91□□□□□ -1.3
TSR1-203ENST00000575049 PIF1Q9H611 641 aa6.91□□□□□ -1.3
TSR1-203ENST00000575049 WWC3Q9ULE0 1092 aa6.91□□□□□ -1.3
TSR1-203ENST00000575049 RIPOR2Q9Y4F9 1068 aa6.91□□□□□ -1.3
TSR1-203ENST00000575049 A0A096LPE4 126 aa6.9□□□□□ -1.3
TSR1-203ENST00000575049 A0A1W2PPZ6 126 aa6.9□□□□□ -1.3
TSR1-203ENST00000575049 DLL1O00548 723 aa6.9□□□□□ -1.3
TSR1-203ENST00000575049 FSCN2O14926 492 aa6.9□□□□□ -1.3
TSR1-203ENST00000575049 ITGB2P05107 769 aa6.9□□□□□ -1.3
TSR1-203ENST00000575049 LDHBP07195 334 aaKnown RBP6.9□□□□□ -1.3
TSR1-203ENST00000575049 SELPP16109 830 aa6.9□□□□□ -1.3
TSR1-203ENST00000575049 CHRNA4P43681 627 aa6.9□□□□□ -1.3
TSR1-203ENST00000575049 GRM2Q14416 872 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms