RNA–Protein interactions for RNA: ENST00000574668.1

TMEM88-202, Transcript of transmembrane protein 88, humanhuman

TSL 2 BASIC

Gene TMEM88, Length 510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-202ENST00000574668 BSDC1Q9NW68 430 aaPredicted RBP20.7■□□□□ 0.9
TMEM88-202ENST00000574668 XDHP47989 1333 aa20.7■□□□□ 0.9
TMEM88-202ENST00000574668 SRGAP3O43295 1099 aa20.69■□□□□ 0.9
TMEM88-202ENST00000574668 TRPA1O75762 1119 aa20.69■□□□□ 0.9
TMEM88-202ENST00000574668 SLC10A3P09131 477 aa20.69■□□□□ 0.9
TMEM88-202ENST00000574668 GMLQ99445 158 aa20.69■□□□□ 0.9
TMEM88-202ENST00000574668 CNNM1Q9NRU3 951 aa20.69■□□□□ 0.9
TMEM88-202ENST00000574668 RNF186Q9NXI6 227 aa20.69■□□□□ 0.9
TMEM88-202ENST00000574668 ATP8B2P98198 1209 aa20.68■□□□□ 0.9
TMEM88-202ENST00000574668 LDHAL6AQ6ZMR3 332 aa20.68■□□□□ 0.9
TMEM88-202ENST00000574668 MYOZ2Q9NPC6 264 aa20.68■□□□□ 0.9
TMEM88-202ENST00000574668 ZNF609O15014 1411 aa20.68■□□□□ 0.9
TMEM88-202ENST00000574668 USP17L8P0C7I0 530 aa20.67■□□□□ 0.9
TMEM88-202ENST00000574668 ATP2B4P23634 1241 aa20.67■□□□□ 0.9
TMEM88-202ENST00000574668 MTX1Q13505 466 aa20.67■□□□□ 0.9
TMEM88-202ENST00000574668 CSRNP1Q96S65 589 aa20.67■□□□□ 0.9
TMEM88-202ENST00000574668 MXD3Q9BW11 206 aa20.67■□□□□ 0.9
TMEM88-202ENST00000574668 SAGE1Q9NXZ1 904 aa20.67■□□□□ 0.9
TMEM88-202ENST00000574668 USP17L3A6NCW0 530 aa20.66■□□□□ 0.9
TMEM88-202ENST00000574668 USP17L4A6NCW7 530 aa20.66■□□□□ 0.9
TMEM88-202ENST00000574668 RFX5P48382 616 aaPredicted RBP20.66■□□□□ 0.9
TMEM88-202ENST00000574668 MOB2Q70IA6 237 aa20.66■□□□□ 0.9
TMEM88-202ENST00000574668 USP17L1Q7RTZ2 530 aa20.66■□□□□ 0.9
TMEM88-202ENST00000574668 RASAL3Q86YV0 1011 aa20.66■□□□□ 0.9
TMEM88-202ENST00000574668 PRAMEF18Q5VWM3 479 aa20.65■□□□□ 0.9
TMEM88-202ENST00000574668 CEP85Q6P2H3 762 aa20.65■□□□□ 0.9
TMEM88-202ENST00000574668 KLHDC4Q8TBB5 520 aa20.65■□□□□ 0.9
TMEM88-202ENST00000574668 ANKRD2Q9GZV1 360 aa20.65■□□□□ 0.9
TMEM88-202ENST00000574668 MINPP1Q9UNW1 487 aa20.65■□□□□ 0.9
TMEM88-202ENST00000574668 PSME4Q14997 1843 aa20.64■□□□□ 0.9
TMEM88-202ENST00000574668 PNMA6EA0A0J9YXQ4 647 aa20.64■□□□□ 0.89
TMEM88-202ENST00000574668 IRX6P78412 446 aaPredicted RBP20.64■□□□□ 0.89
TMEM88-202ENST00000574668 PTPN12Q05209 780 aaKnown RBP20.64■□□□□ 0.89
TMEM88-202ENST00000574668 PODNQ7Z5L7 613 aa20.64■□□□□ 0.89
TMEM88-202ENST00000574668 RPAP2Q8IXW5 612 aaPredicted RBP20.64■□□□□ 0.89
TMEM88-202ENST00000574668 PUS3Q9BZE2 481 aaKnown RBP20.64■□□□□ 0.89
TMEM88-202ENST00000574668 EYA2O00167 538 aa20.63■□□□□ 0.89
TMEM88-202ENST00000574668 HMMRO75330 724 aa20.63■□□□□ 0.89
TMEM88-202ENST00000574668 CHRNDQ07001 517 aa20.63■□□□□ 0.89
TMEM88-202ENST00000574668 NBPF9Q3BBW0 867 aa20.63■□□□□ 0.89
TMEM88-202ENST00000574668 FBXW7Q969H0 707 aa20.63■□□□□ 0.89
TMEM88-202ENST00000574668 SIL1Q9H173 461 aa20.63■□□□□ 0.89
TMEM88-202ENST00000574668 COPRSQ9NQ92 184 aa20.63■□□□□ 0.89
TMEM88-202ENST00000574668 PA2G4Q9UQ80 394 aaKnown RBP20.63■□□□□ 0.89
TMEM88-202ENST00000574668 SPEF2Q9C093 1822 aa20.62■□□□□ 0.89
TMEM88-202ENST00000574668 MED23Q9ULK4 1368 aa20.62■□□□□ 0.89
TMEM88-202ENST00000574668 POLA2Q14181 598 aa20.62■□□□□ 0.89
TMEM88-202ENST00000574668 LRRC24Q50LG9 513 aa20.62■□□□□ 0.89
TMEM88-202ENST00000574668 DACT2Q5SW24 774 aa20.62■□□□□ 0.89
TMEM88-202ENST00000574668 TXNRD3Q86VQ6 643 aa20.62■□□□□ 0.89
TMEM88-202ENST00000574668 EXOC6Q8TAG9 804 aa20.62■□□□□ 0.89
TMEM88-202ENST00000574668 SSH3Q8TE77 659 aa20.62■□□□□ 0.89
TMEM88-202ENST00000574668 FBXO3Q9UK99 471 aa20.62■□□□□ 0.89
TMEM88-202ENST00000574668 MROH5Q6ZUA9 1318 aa20.61■□□□□ 0.89
TMEM88-202ENST00000574668 PITPNM2Q9BZ72 1349 aa20.61■□□□□ 0.89
TMEM88-202ENST00000574668 UBE2Q2LH0YL09 131 aa20.61■□□□□ 0.89
TMEM88-202ENST00000574668 KCNJ4P48050 445 aa20.61■□□□□ 0.89
TMEM88-202ENST00000574668 G3BP1Q13283 466 aaKnown RBP eCLIP20.61■□□□□ 0.89
TMEM88-202ENST00000574668 AAMPQ13685 434 aa20.61■□□□□ 0.89
TMEM88-202ENST00000574668 METTL24Q5JXM2 366 aa20.61■□□□□ 0.89
TMEM88-202ENST00000574668 RIPOR2Q9Y4F9 1068 aa20.61■□□□□ 0.89
TMEM88-202ENST00000574668 PAPPA2Q9BXP8 1791 aa20.61■□□□□ 0.89
TMEM88-202ENST00000574668 SLC34A2O95436 690 aa20.6■□□□□ 0.89
TMEM88-202ENST00000574668 KLRK1P26718 216 aa20.6■□□□□ 0.89
TMEM88-202ENST00000574668 FKBP1BP68106 108 aa20.6■□□□□ 0.89
TMEM88-202ENST00000574668 HELBQ8NG08 1087 aaPredicted RBP20.6■□□□□ 0.89
TMEM88-202ENST00000574668 CIAO1O76071 339 aa20.59■□□□□ 0.89
TMEM88-202ENST00000574668 IL15P40933 162 aaPredicted RBP20.59■□□□□ 0.89
TMEM88-202ENST00000574668 SOX10P56693 466 aa20.59■□□□□ 0.89
TMEM88-202ENST00000574668 OS9Q13438 667 aaPredicted RBP20.59■□□□□ 0.89
TMEM88-202ENST00000574668 LEMD3Q9Y2U8 911 aa20.59■□□□□ 0.89
TMEM88-202ENST00000574668 ZNF646O15015 1829 aaPredicted RBP20.59■□□□□ 0.89
TMEM88-202ENST00000574668 TAF5LO75529 589 aa20.58■□□□□ 0.89
TMEM88-202ENST00000574668 SURF6O75683 361 aaKnown RBP20.58■□□□□ 0.89
TMEM88-202ENST00000574668 SASH1O94885 1247 aa20.58■□□□□ 0.89
TMEM88-202ENST00000574668 CEP126Q9P2H0 1117 aa20.58■□□□□ 0.89
TMEM88-202ENST00000574668 AKAP11Q9UKA4 1901 aa20.57■□□□□ 0.88
TMEM88-202ENST00000574668 WNT10BO00744 389 aa20.57■□□□□ 0.88
TMEM88-202ENST00000574668 TTLL12Q14166 644 aaPredicted RBP20.57■□□□□ 0.88
TMEM88-202ENST00000574668 COA1Q9GZY4 146 aa20.57■□□□□ 0.88
TMEM88-202ENST00000574668 NEFLP07196 543 aa20.56■□□□□ 0.88
TMEM88-202ENST00000574668 MKRN3Q13064 507 aaKnown RBP20.56■□□□□ 0.88
TMEM88-202ENST00000574668 STRIP1Q5VSL9 837 aa20.56■□□□□ 0.88
TMEM88-202ENST00000574668 ATG9AQ7Z3C6 839 aa20.56■□□□□ 0.88
TMEM88-202ENST00000574668 CTU1Q7Z7A3 348 aaKnown RBP20.56■□□□□ 0.88
TMEM88-202ENST00000574668 OGFOD1Q8N543 542 aa20.56■□□□□ 0.88
TMEM88-202ENST00000574668 ZNF804BA4D1E1 1349 aa20.55■□□□□ 0.88
TMEM88-202ENST00000574668 TBC1D8O95759 1140 aa20.55■□□□□ 0.88
TMEM88-202ENST00000574668 SIRT2Q8IXJ6 389 aa20.55■□□□□ 0.88
TMEM88-202ENST00000574668 REM2Q8IYK8 340 aaPredicted RBP20.55■□□□□ 0.88
TMEM88-202ENST00000574668 PCDHB15Q9Y5E8 787 aa20.55■□□□□ 0.88
TMEM88-202ENST00000574668 MYO3BQ8WXR4 1341 aa20.54■□□□□ 0.88
TMEM88-202ENST00000574668 PRKG1Q13976 671 aa20.54■□□□□ 0.88
TMEM88-202ENST00000574668 UBE4AQ14139 1066 aa20.54■□□□□ 0.88
TMEM88-202ENST00000574668 HSP90AB4PQ58FF6 505 aa20.54■□□□□ 0.88
TMEM88-202ENST00000574668 KIAA0825Q8IV33 1275 aa20.54■□□□□ 0.88
TMEM88-202ENST00000574668 NOP58Q9Y2X3 529 aaKnown RBP20.54■□□□□ 0.88
TMEM88-202ENST00000574668 TNRC18O15417 2968 aaPredicted RBP20.53■□□□□ 0.88
TMEM88-202ENST00000574668 PDE8BO95263 885 aa20.53■□□□□ 0.88
TMEM88-202ENST00000574668 TTLL5Q6EMB2 1281 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms