RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 PGAP2Q9UHJ9 254 aa11.38□□□□□ -0.59
NDE1-207ENST00000573203 ZNF609O15014 1411 aa11.37□□□□□ -0.59
NDE1-207ENST00000573203 IPO8O15397 1037 aaKnown RBP11.37□□□□□ -0.59
NDE1-207ENST00000573203 EGFRP00533 1210 aa11.37□□□□□ -0.59
NDE1-207ENST00000573203 UBTFL1P0CB47 393 aaPredicted RBP11.37□□□□□ -0.59
NDE1-207ENST00000573203 FMR1Q06787 632 aaKnown RBP eCLIP11.37□□□□□ -0.59
NDE1-207ENST00000573203 STRIP1Q5VSL9 837 aa11.37□□□□□ -0.59
NDE1-207ENST00000573203 TTLL5Q6EMB2 1281 aa11.37□□□□□ -0.59
NDE1-207ENST00000573203 C15orf52Q6ZUT6 534 aaKnown RBP11.37□□□□□ -0.59
NDE1-207ENST00000573203 CDC37L1Q7L3B6 337 aa11.37□□□□□ -0.59
NDE1-207ENST00000573203 JMYQ8N9B5 988 aa11.37□□□□□ -0.59
NDE1-207ENST00000573203 ARHGAP45Q92619 1136 aa11.37□□□□□ -0.59
NDE1-207ENST00000573203 GMLQ99445 158 aa11.37□□□□□ -0.59
NDE1-207ENST00000573203 GLIS2Q9BZE0 524 aaPredicted RBP11.37□□□□□ -0.59
NDE1-207ENST00000573203 PUS3Q9BZE2 481 aaKnown RBP11.37□□□□□ -0.59
NDE1-207ENST00000573203 CD209Q9NNX6 404 aa11.37□□□□□ -0.59
NDE1-207ENST00000573203 METRNQ9UJH8 293 aa11.37□□□□□ -0.59
NDE1-207ENST00000573203 ABT1Q9ULW3 272 aaKnown RBP11.37□□□□□ -0.59
NDE1-207ENST00000573203 ZNF646O15015 1829 aaPredicted RBP11.37□□□□□ -0.59
NDE1-207ENST00000573203 BCAR3O75815 825 aa11.36□□□□□ -0.59
NDE1-207ENST00000573203 USP17L8P0C7I0 530 aa11.36□□□□□ -0.59
NDE1-207ENST00000573203 ZNF280AP59817 542 aaPredicted RBP11.36□□□□□ -0.59
NDE1-207ENST00000573203 GTF2IP78347 998 aa11.36□□□□□ -0.59
NDE1-207ENST00000573203 DACT2Q5SW24 774 aa11.36□□□□□ -0.59
NDE1-207ENST00000573203 ZNF804AQ7Z570 1209 aa11.36□□□□□ -0.59
NDE1-207ENST00000573203 FRAT1Q92837 279 aaPredicted RBP11.36□□□□□ -0.59
NDE1-207ENST00000573203 DCPSQ96C86 337 aaKnown RBP11.36□□□□□ -0.59
NDE1-207ENST00000573203 MXD3Q9BW11 206 aa11.36□□□□□ -0.59
NDE1-207ENST00000573203 HDAC5Q9UQL6 1122 aa11.36□□□□□ -0.59
NDE1-207ENST00000573203 RIPOR2Q9Y4F9 1068 aa11.36□□□□□ -0.59
NDE1-207ENST00000573203 CNTNAP1P78357 1384 aa11.36□□□□□ -0.59
NDE1-207ENST00000573203 MROH5Q6ZUA9 1318 aa11.35□□□□□ -0.59
NDE1-207ENST00000573203 MYO3BQ8WXR4 1341 aa11.35□□□□□ -0.59
NDE1-207ENST00000573203 CELF2O95319 508 aaKnown RBP11.35□□□□□ -0.59
NDE1-207ENST00000573203 PDAP1Q13442 181 aaKnown RBP11.35□□□□□ -0.59
NDE1-207ENST00000573203 UBE4AQ14139 1066 aa11.35□□□□□ -0.59
NDE1-207ENST00000573203 DEFB115Q30KQ5 88 aa11.35□□□□□ -0.59
NDE1-207ENST00000573203 METTL24Q5JXM2 366 aa11.35□□□□□ -0.59
NDE1-207ENST00000573203 KRT26Q7Z3Y9 468 aa11.35□□□□□ -0.59
NDE1-207ENST00000573203 USP48Q86UV5 1035 aa11.35□□□□□ -0.59
NDE1-207ENST00000573203 OGFOD1Q8N543 542 aa11.35□□□□□ -0.59
NDE1-207ENST00000573203 ZNF408Q9H9D4 720 aa11.35□□□□□ -0.59
NDE1-207ENST00000573203 MYOZ2Q9NPC6 264 aa11.35□□□□□ -0.59
NDE1-207ENST00000573203 IRS2Q9Y4H2 1338 aa11.35□□□□□ -0.59
NDE1-207ENST00000573203 LRRC24Q50LG9 513 aa11.34□□□□□ -0.59
NDE1-207ENST00000573203 CST9Q5W186 159 aa11.34□□□□□ -0.59
NDE1-207ENST00000573203 INTS3Q68E01 1043 aaKnown RBP11.34□□□□□ -0.59
NDE1-207ENST00000573203 KLHDC4Q8TBB5 520 aa11.34□□□□□ -0.59
NDE1-207ENST00000573203 GGA3Q9NZ52 723 aa11.34□□□□□ -0.59
NDE1-207ENST00000573203 LRRFIP2Q9Y608 721 aaKnown RBP11.34□□□□□ -0.59
NDE1-207ENST00000573203 RASSF10A6NK89 507 aa11.33□□□□□ -0.6
NDE1-207ENST00000573203 GNAI3P08754 354 aa11.33□□□□□ -0.6
NDE1-207ENST00000573203 TRIM27P14373 513 aa11.33□□□□□ -0.6
NDE1-207ENST00000573203 IL1R1P14778 569 aa11.33□□□□□ -0.6
NDE1-207ENST00000573203 VEGFBP49765 207 aa11.33□□□□□ -0.6
NDE1-207ENST00000573203 SCARF1Q14162 830 aa11.33□□□□□ -0.6
NDE1-207ENST00000573203 ATF7IPQ6VMQ6 1270 aa11.33□□□□□ -0.6
NDE1-207ENST00000573203 PAXIP1Q6ZW49 1069 aaPredicted RBP11.33□□□□□ -0.6
NDE1-207ENST00000573203 SULF1Q8IWU6 871 aa11.33□□□□□ -0.6
NDE1-207ENST00000573203 CLUAP1Q96AJ1 413 aa11.33□□□□□ -0.6
NDE1-207ENST00000573203 MEIS3Q99687 375 aa11.33□□□□□ -0.6
NDE1-207ENST00000573203 HDAC9Q9UKV0 1011 aa11.33□□□□□ -0.6
NDE1-207ENST00000573203 PCNTO95613 3336 aa11.33□□□□□ -0.6
NDE1-207ENST00000573203 ASTN2O75129 1339 aaPredicted RBP11.33□□□□□ -0.6
NDE1-207ENST00000573203 ADM5C9JUS6 153 aa11.32□□□□□ -0.6
NDE1-207ENST00000573203 PDE8BO95263 885 aa11.32□□□□□ -0.6
NDE1-207ENST00000573203 NEFLP07196 543 aa11.32□□□□□ -0.6
NDE1-207ENST00000573203 HIBADHP31937 336 aaKnown RBP11.32□□□□□ -0.6
NDE1-207ENST00000573203 GYG1P46976 350 aa11.32□□□□□ -0.6
NDE1-207ENST00000573203 RFX5P48382 616 aaPredicted RBP11.32□□□□□ -0.6
NDE1-207ENST00000573203 PSEN1P49768 467 aa11.32□□□□□ -0.6
NDE1-207ENST00000573203 MMP14P50281 582 aa11.32□□□□□ -0.6
NDE1-207ENST00000573203 PTPN12Q05209 780 aaKnown RBP11.32□□□□□ -0.6
NDE1-207ENST00000573203 ANGEL2Q5VTE6 544 aaKnown RBP11.32□□□□□ -0.6
NDE1-207ENST00000573203 ZKSCAN2Q63HK3 967 aa11.32□□□□□ -0.6
NDE1-207ENST00000573203 VPS37DQ86XT2 251 aa11.32□□□□□ -0.6
NDE1-207ENST00000573203 KIAA0825Q8IV33 1275 aa11.32□□□□□ -0.6
NDE1-207ENST00000573203 TNNQ9UQP3 1299 aa11.32□□□□□ -0.6
NDE1-207ENST00000573203 TLL2Q9Y6L7 1015 aa11.32□□□□□ -0.6
NDE1-207ENST00000573203 EYA2O00167 538 aa11.31□□□□□ -0.6
NDE1-207ENST00000573203 HSPA1AP0DMV8 641 aaKnown RBP11.31□□□□□ -0.6
NDE1-207ENST00000573203 HSPA1BP0DMV9 641 aaKnown RBP11.31□□□□□ -0.6
NDE1-207ENST00000573203 GRM1Q13255 1194 aa11.31□□□□□ -0.6
NDE1-207ENST00000573203 CAVIN4Q5BKX8 364 aa11.31□□□□□ -0.6
NDE1-207ENST00000573203 DLK2Q6UY11 383 aa11.31□□□□□ -0.6
NDE1-207ENST00000573203 FAM84BQ96KN1 310 aaPredicted RBP11.31□□□□□ -0.6
NDE1-207ENST00000573203 SIL1Q9H173 461 aa11.31□□□□□ -0.6
NDE1-207ENST00000573203 JAG2Q9Y219 1238 aa11.31□□□□□ -0.6
NDE1-207ENST00000573203 SUPT16HQ9Y5B9 1047 aaKnown RBP11.31□□□□□ -0.6
NDE1-207ENST00000573203 PITPNM2Q9BZ72 1349 aa11.31□□□□□ -0.6
NDE1-207ENST00000573203 WDR33Q9C0J8 1336 aaKnown RBP11.31□□□□□ -0.6
NDE1-207ENST00000573203 F8W031 263 aaPredicted RBP11.3□□□□□ -0.6
NDE1-207ENST00000573203 WNT10BO00744 389 aa11.3□□□□□ -0.6
NDE1-207ENST00000573203 FRAT2O75474 233 aaPredicted RBP11.3□□□□□ -0.6
NDE1-207ENST00000573203 SASH1O94885 1247 aa11.3□□□□□ -0.6
NDE1-207ENST00000573203 IFIT1P09914 478 aaKnown RBP11.3□□□□□ -0.6
NDE1-207ENST00000573203 ECE1P42892 770 aa11.3□□□□□ -0.6
NDE1-207ENST00000573203 FKBP1AP62942 108 aaKnown RBP11.3□□□□□ -0.6
NDE1-207ENST00000573203 PUM3Q15397 648 aaKnown RBP11.3□□□□□ -0.6
NDE1-207ENST00000573203 NBPF9Q3BBW0 867 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms