RNA–Protein interactions for RNA: ENST00000572760.5

NPLOC4-209, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best) BASIC

Gene NPLOC4, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-209ENST00000572760 GLTPD2A6NH11 291 aa17.76■□□□□ 0.43
NPLOC4-209ENST00000572760 SEMA3EO15041 775 aa17.76■□□□□ 0.43
NPLOC4-209ENST00000572760 GPATCH3Q96I76 525 aa17.76■□□□□ 0.43
NPLOC4-209ENST00000572760 LNPKQ9C0E8 428 aa17.76■□□□□ 0.43
NPLOC4-209ENST00000572760 AKAP11Q9UKA4 1901 aa17.76■□□□□ 0.43
NPLOC4-209ENST00000572760 ZNF526Q8TF50 670 aaPredicted RBP17.75■□□□□ 0.43
NPLOC4-209ENST00000572760 FAM205AQ6ZU69 1335 aa17.74■□□□□ 0.43
NPLOC4-209ENST00000572760 VIL1P09327 827 aaKnown RBP17.74■□□□□ 0.43
NPLOC4-209ENST00000572760 ARID4AP29374 1257 aaPredicted RBP17.74■□□□□ 0.43
NPLOC4-209ENST00000572760 LMOD1P29536 600 aaPredicted RBP17.74■□□□□ 0.43
NPLOC4-209ENST00000572760 RSBN1LQ6PCB5 846 aaPredicted RBP17.74■□□□□ 0.43
NPLOC4-209ENST00000572760 CENPQQ7L2Z9 268 aaPredicted RBP17.74■□□□□ 0.43
NPLOC4-209ENST00000572760 CHD1LQ86WJ1 897 aa17.74■□□□□ 0.43
NPLOC4-209ENST00000572760 WDR66Q8TBY9 1149 aa17.74■□□□□ 0.43
NPLOC4-209ENST00000572760 TBC1D22AQ8WUA7 517 aa17.74■□□□□ 0.43
NPLOC4-209ENST00000572760 MYO3BQ8WXR4 1341 aa17.73■□□□□ 0.43
NPLOC4-209ENST00000572760 ZNF646O15015 1829 aaPredicted RBP17.73■□□□□ 0.43
NPLOC4-209ENST00000572760 SCN4AP35499 1836 aa17.73■□□□□ 0.43
NPLOC4-209ENST00000572760 NUCB1Q02818 461 aa17.73■□□□□ 0.43
NPLOC4-209ENST00000572760 MFSD14BQ5SR56 506 aa17.73■□□□□ 0.43
NPLOC4-209ENST00000572760 DACT2Q5SW24 774 aa17.73■□□□□ 0.43
NPLOC4-209ENST00000572760 C16orf71Q8IYS4 520 aaPredicted RBP17.73■□□□□ 0.43
NPLOC4-209ENST00000572760 ZBTB12Q9Y330 459 aaPredicted RBP17.73■□□□□ 0.43
NPLOC4-209ENST00000572760 UTRNP46939 3433 aa17.72■□□□□ 0.43
NPLOC4-209ENST00000572760 MYO5AQ9Y4I1 1855 aaKnown RBP17.72■□□□□ 0.43
NPLOC4-209ENST00000572760 RPS12P25398 132 aaKnown RBP17.72■□□□□ 0.43
NPLOC4-209ENST00000572760 GMPSP49915 693 aaPredicted RBP17.72■□□□□ 0.43
NPLOC4-209ENST00000572760 RASGRF1Q13972 1273 aa17.72■□□□□ 0.43
NPLOC4-209ENST00000572760 SPATA5Q8NB90 893 aa17.72■□□□□ 0.43
NPLOC4-209ENST00000572760 AGBL3Q8NEM8 1001 aa17.72■□□□□ 0.43
NPLOC4-209ENST00000572760 ZNF512BQ96KM6 892 aaPredicted RBP17.72■□□□□ 0.43
NPLOC4-209ENST00000572760 MXD3Q9BW11 206 aa17.72■□□□□ 0.43
NPLOC4-209ENST00000572760 SNRKQ9NRH2 765 aa17.72■□□□□ 0.43
NPLOC4-209ENST00000572760 ECHDC1Q9NTX5 307 aa17.72■□□□□ 0.43
NPLOC4-209ENST00000572760 HMG20BQ9P0W2 317 aa17.72■□□□□ 0.43
NPLOC4-209ENST00000572760 MCAMP43121 646 aa17.71■□□□□ 0.43
NPLOC4-209ENST00000572760 ZGPATQ8N5A5 531 aaKnown RBP17.71■□□□□ 0.43
NPLOC4-209ENST00000572760 ABCF2Q9UG63 623 aa17.71■□□□□ 0.43
NPLOC4-209ENST00000572760 WDR90Q96KV7 1748 aa17.7■□□□□ 0.42
NPLOC4-209ENST00000572760 F8W031 263 aaPredicted RBP17.7■□□□□ 0.42
NPLOC4-209ENST00000572760 H7C1D1 291 aa17.7■□□□□ 0.42
NPLOC4-209ENST00000572760 MX1P20591 662 aa17.7■□□□□ 0.42
NPLOC4-209ENST00000572760 FKBP1AP62942 108 aaKnown RBP17.7■□□□□ 0.42
NPLOC4-209ENST00000572760 SCARF1Q14162 830 aa17.7■□□□□ 0.42
NPLOC4-209ENST00000572760 KIAA0825Q8IV33 1275 aa17.7■□□□□ 0.42
NPLOC4-209ENST00000572760 BOLA2Q9H3K6 86 aa17.7■□□□□ 0.42
NPLOC4-209ENST00000572760 GPBP1L1Q9HC44 474 aaPredicted RBP17.7■□□□□ 0.42
NPLOC4-209ENST00000572760 HDAC9Q9UKV0 1011 aa17.7■□□□□ 0.42
NPLOC4-209ENST00000572760 MYH2Q9UKX2 1941 aa17.69■□□□□ 0.42
NPLOC4-209ENST00000572760 IQCA1LA6NCM1 817 aa17.69■□□□□ 0.42
NPLOC4-209ENST00000572760 ERC2O15083 957 aa17.69■□□□□ 0.42
NPLOC4-209ENST00000572760 ZBTB22O15209 634 aa17.69■□□□□ 0.42
NPLOC4-209ENST00000572760 ATP5JP18859 108 aa17.69■□□□□ 0.42
NPLOC4-209ENST00000572760 SPTY2D1Q68D10 685 aaPredicted RBP17.69■□□□□ 0.42
NPLOC4-209ENST00000572760 PI16Q6UXB8 463 aa17.69■□□□□ 0.42
NPLOC4-209ENST00000572760 OGFOD1Q8N543 542 aa17.69■□□□□ 0.42
NPLOC4-209ENST00000572760 OTUD7AQ8TE49 926 aaPredicted RBP17.69■□□□□ 0.42
NPLOC4-209ENST00000572760 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.69■□□□□ 0.42
NPLOC4-209ENST00000572760 DPF2Q92785 391 aa17.69■□□□□ 0.42
NPLOC4-209ENST00000572760 L3MBTL3Q96JM7 780 aaPredicted RBP17.69■□□□□ 0.42
NPLOC4-209ENST00000572760 RRAGCQ9HB90 399 aa17.69■□□□□ 0.42
NPLOC4-209ENST00000572760 CNOT7Q9UIV1 285 aaKnown RBP17.69■□□□□ 0.42
NPLOC4-209ENST00000572760 HACL1Q9UJ83 578 aa17.69■□□□□ 0.42
NPLOC4-209ENST00000572760 PDS5AQ29RF7 1337 aaKnown RBP17.69■□□□□ 0.42
NPLOC4-209ENST00000572760 TTC41PQ6P2S7 1318 aa17.69■□□□□ 0.42
NPLOC4-209ENST00000572760 COL1A1P02452 1464 aaPredicted RBP17.69■□□□□ 0.42
NPLOC4-209ENST00000572760 USP17L8P0C7I0 530 aa17.68■□□□□ 0.42
NPLOC4-209ENST00000572760 ZAP70P43403 619 aa17.68■□□□□ 0.42
NPLOC4-209ENST00000572760 MICALL2Q8IY33 904 aa17.68■□□□□ 0.42
NPLOC4-209ENST00000572760 CERS5Q8N5B7 392 aa17.68■□□□□ 0.42
NPLOC4-209ENST00000572760 DNAJC2Q99543 621 aaKnown RBP17.68■□□□□ 0.42
NPLOC4-209ENST00000572760 GPRC5DQ9NZD1 345 aa17.68■□□□□ 0.42
NPLOC4-209ENST00000572760 TTF2Q9UNY4 1162 aaKnown RBP17.68■□□□□ 0.42
NPLOC4-209ENST00000572760 MYH7P12883 1935 aa17.68■□□□□ 0.42
NPLOC4-209ENST00000572760 AK9Q5TCS8 1911 aa17.68■□□□□ 0.42
NPLOC4-209ENST00000572760 LDHBP07195 334 aaKnown RBP17.67■□□□□ 0.42
NPLOC4-209ENST00000572760 VEGFAP15692 232 aaPredicted RBP17.67■□□□□ 0.42
NPLOC4-209ENST00000572760 SCNN1DP51172 638 aa17.67■□□□□ 0.42
NPLOC4-209ENST00000572760 TSHZ3Q63HK5 1081 aa17.67■□□□□ 0.42
NPLOC4-209ENST00000572760 ERICH6Q7L0X2 663 aa17.67■□□□□ 0.42
NPLOC4-209ENST00000572760 GMLQ99445 158 aa17.67■□□□□ 0.42
NPLOC4-209ENST00000572760 LRP2BPQ9P2M1 347 aa17.67■□□□□ 0.42
NPLOC4-209ENST00000572760 SUGT1Q9Y2Z0 365 aa17.67■□□□□ 0.42
NPLOC4-209ENST00000572760 SALL1Q9NSC2 1324 aa17.67■□□□□ 0.42
NPLOC4-209ENST00000572760 POLR2AP24928 1970 aaKnown RBP17.66■□□□□ 0.42
NPLOC4-209ENST00000572760 GLRX3O76003 335 aaKnown RBP17.66■□□□□ 0.42
NPLOC4-209ENST00000572760 EPS15P42566 896 aa17.66■□□□□ 0.42
NPLOC4-209ENST00000572760 PDE1AP54750 535 aa17.66■□□□□ 0.42
NPLOC4-209ENST00000572760 RBM26Q5T8P6 1007 aaKnown RBP17.66■□□□□ 0.42
NPLOC4-209ENST00000572760 TBC1D9Q6ZT07 1266 aa17.66■□□□□ 0.42
NPLOC4-209ENST00000572760 NMRK2Q9NPI5 230 aa17.66■□□□□ 0.42
NPLOC4-209ENST00000572760 RAI14Q9P0K7 980 aa17.66■□□□□ 0.42
NPLOC4-209ENST00000572760 NDUFB9Q9Y6M9 179 aa17.66■□□□□ 0.42
NPLOC4-209ENST00000572760 MAST3O60307 1309 aa17.66■□□□□ 0.42
NPLOC4-209ENST00000572760 GOLIM4O00461 696 aa17.65■□□□□ 0.42
NPLOC4-209ENST00000572760 CYP2E1P05181 493 aaPredicted RBP17.65■□□□□ 0.42
NPLOC4-209ENST00000572760 EPHX2P34913 555 aa17.65■□□□□ 0.42
NPLOC4-209ENST00000572760 MMP14P50281 582 aa17.65■□□□□ 0.42
NPLOC4-209ENST00000572760 RBM5P52756 815 aaKnown RBP eCLIP17.65■□□□□ 0.42
NPLOC4-209ENST00000572760 TTF1Q15361 905 aaPredicted RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms