RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 ELF2Q15723 593 aa20.33■□□□□ 0.85
SCARF1-205ENST00000571272 ISM2Q6H9L7 571 aa20.33■□□□□ 0.85
SCARF1-205ENST00000571272 TMC6Q7Z403 805 aa20.33■□□□□ 0.85
SCARF1-205ENST00000571272 C8orf76Q96K31 380 aa20.33■□□□□ 0.85
SCARF1-205ENST00000571272 A0A1B0GUL7 405 aa20.33■□□□□ 0.84
SCARF1-205ENST00000571272 TTLL7Q6ZT98 887 aa20.33■□□□□ 0.84
SCARF1-205ENST00000571272 HSP90AB3PQ58FF7 597 aa20.32■□□□□ 0.84
SCARF1-205ENST00000571272 PUS3Q9BZE2 481 aaKnown RBP20.32■□□□□ 0.84
SCARF1-205ENST00000571272 H7C1W4 665 aa20.32■□□□□ 0.84
SCARF1-205ENST00000571272 KIF20AO95235 890 aa20.32■□□□□ 0.84
SCARF1-205ENST00000571272 GSDMDP57764 484 aa20.32■□□□□ 0.84
SCARF1-205ENST00000571272 WASHC4Q2M389 1173 aa20.32■□□□□ 0.84
SCARF1-205ENST00000571272 IL15P40933 162 aaPredicted RBP20.32■□□□□ 0.84
SCARF1-205ENST00000571272 CABP4P57796 275 aa20.32■□□□□ 0.84
SCARF1-205ENST00000571272 ADAMTS7Q9UKP4 1686 aa20.31■□□□□ 0.84
SCARF1-205ENST00000571272 SPTLC2O15270 562 aa20.31■□□□□ 0.84
SCARF1-205ENST00000571272 ZNF771Q7L3S4 317 aaPredicted RBP20.31■□□□□ 0.84
SCARF1-205ENST00000571272 ORC3Q9UBD5 711 aaPredicted RBP20.31■□□□□ 0.84
SCARF1-205ENST00000571272 MEGF6O75095 1541 aa20.31■□□□□ 0.84
SCARF1-205ENST00000571272 KLF18A0A0U1RQI7 1052 aa20.31■□□□□ 0.84
SCARF1-205ENST00000571272 A0A1W2PQ27 194 aa20.31■□□□□ 0.84
SCARF1-205ENST00000571272 A0A1W2PQ64 194 aa20.31■□□□□ 0.84
SCARF1-205ENST00000571272 A0A1W2PQD8 194 aa20.31■□□□□ 0.84
SCARF1-205ENST00000571272 NBPF26B4DH59 902 aa20.31■□□□□ 0.84
SCARF1-205ENST00000571272 NBPF14Q5TI25 921 aa20.31■□□□□ 0.84
SCARF1-205ENST00000571272 E4F1Q66K89 784 aaPredicted RBP20.31■□□□□ 0.84
SCARF1-205ENST00000571272 ARMCX5Q6P1M9 558 aa20.31■□□□□ 0.84
SCARF1-205ENST00000571272 NBPF10Q6P3W6 841 aaKnown RBP20.31■□□□□ 0.84
SCARF1-205ENST00000571272 NBPF15Q8N660 670 aa20.31■□□□□ 0.84
SCARF1-205ENST00000571272 ZNF397Q8NF99 534 aaPredicted RBP20.31■□□□□ 0.84
SCARF1-205ENST00000571272 DCAF5Q96JK2 942 aa20.31■□□□□ 0.84
SCARF1-205ENST00000571272 OSBPL5Q9H0X9 879 aaPredicted RBP20.31■□□□□ 0.84
SCARF1-205ENST00000571272 SLC3A2P08195 630 aaKnown RBP20.3■□□□□ 0.84
SCARF1-205ENST00000571272 FBXO38Q6PIJ6 1188 aa20.3■□□□□ 0.84
SCARF1-205ENST00000571272 GOLGA8BA8MQT2 603 aa20.3■□□□□ 0.84
SCARF1-205ENST00000571272 EYA2O00167 538 aa20.3■□□□□ 0.84
SCARF1-205ENST00000571272 ZBTB3Q9H5J0 574 aa20.3■□□□□ 0.84
SCARF1-205ENST00000571272 CWC25Q9NXE8 425 aaPredicted RBP20.3■□□□□ 0.84
SCARF1-205ENST00000571272 MORC2Q9Y6X9 1032 aaPredicted RBP20.3■□□□□ 0.84
SCARF1-205ENST00000571272 SCN11AQ9UI33 1791 aa20.3■□□□□ 0.84
SCARF1-205ENST00000571272 ZNF202O95125 648 aa20.29■□□□□ 0.84
SCARF1-205ENST00000571272 SLU7O95391 586 aaKnown RBP20.29■□□□□ 0.84
SCARF1-205ENST00000571272 MYSM1Q5VVJ2 828 aa20.29■□□□□ 0.84
SCARF1-205ENST00000571272 FBXO18Q8NFZ0 1043 aa20.29■□□□□ 0.84
SCARF1-205ENST00000571272 KCNG4Q8TDN1 519 aa20.29■□□□□ 0.84
SCARF1-205ENST00000571272 DDX17Q92841 729 aaKnown RBP20.29■□□□□ 0.84
SCARF1-205ENST00000571272 ERO1AQ96HE7 468 aa20.29■□□□□ 0.84
SCARF1-205ENST00000571272 NEDD4P46934 1319 aa20.29■□□□□ 0.84
SCARF1-205ENST00000571272 KIF28PB7ZC32 967 aa20.29■□□□□ 0.84
SCARF1-205ENST00000571272 PRC1O43663 620 aa20.29■□□□□ 0.84
SCARF1-205ENST00000571272 CHRNA2Q15822 529 aa20.29■□□□□ 0.84
SCARF1-205ENST00000571272 SYNE3Q6ZMZ3 975 aa20.29■□□□□ 0.84
SCARF1-205ENST00000571272 CABLES1Q8TDN4 633 aa20.29■□□□□ 0.84
SCARF1-205ENST00000571272 CPLX1O14810 134 aa20.28■□□□□ 0.84
SCARF1-205ENST00000571272 LMOD1P29536 600 aaPredicted RBP20.28■□□□□ 0.84
SCARF1-205ENST00000571272 MARCKSP29966 332 aaPredicted RBP20.28■□□□□ 0.84
SCARF1-205ENST00000571272 SYT10Q6XYQ8 523 aa20.28■□□□□ 0.84
SCARF1-205ENST00000571272 FGAP02671 866 aa20.28■□□□□ 0.84
SCARF1-205ENST00000571272 SFPQP23246 707 aaKnown RBP eCLIP20.28■□□□□ 0.84
SCARF1-205ENST00000571272 GORABQ5T7V8 394 aa20.28■□□□□ 0.84
SCARF1-205ENST00000571272 PPP1R13BQ96KQ4 1090 aa20.28■□□□□ 0.84
SCARF1-205ENST00000571272 CCDC85AQ96PX6 553 aaPredicted RBP20.28■□□□□ 0.84
SCARF1-205ENST00000571272 GPR108Q9NPR9 543 aa20.28■□□□□ 0.84
SCARF1-205ENST00000571272 IMPACTQ9P2X3 320 aa20.28■□□□□ 0.84
SCARF1-205ENST00000571272 CAMTA1Q9Y6Y1 1673 aa20.28■□□□□ 0.84
SCARF1-205ENST00000571272 FOXP2O15409 715 aa20.28■□□□□ 0.84
SCARF1-205ENST00000571272 IMMTQ16891 758 aaKnown RBP20.28■□□□□ 0.84
SCARF1-205ENST00000571272 POLR3EQ9NVU0 708 aa20.28■□□□□ 0.84
SCARF1-205ENST00000571272 HPS5Q9UPZ3 1129 aa20.28■□□□□ 0.84
SCARF1-205ENST00000571272 ADORA1P30542 326 aa20.27■□□□□ 0.84
SCARF1-205ENST00000571272 ARFGEF2Q9Y6D5 1785 aa20.27■□□□□ 0.84
SCARF1-205ENST00000571272 A1BGP04217 495 aa20.27■□□□□ 0.83
SCARF1-205ENST00000571272 YEATS4O95619 227 aa20.26■□□□□ 0.83
SCARF1-205ENST00000571272 EVCP57679 992 aa20.26■□□□□ 0.83
SCARF1-205ENST00000571272 LRRN4CLQ8ND94 238 aa20.26■□□□□ 0.83
SCARF1-205ENST00000571272 CHMP4CQ96CF2 233 aa20.26■□□□□ 0.83
SCARF1-205ENST00000571272 ATP1A3P13637 1013 aa20.26■□□□□ 0.83
SCARF1-205ENST00000571272 PFKFB1P16118 471 aa20.26■□□□□ 0.83
SCARF1-205ENST00000571272 NLRP12P59046 1061 aa20.26■□□□□ 0.83
SCARF1-205ENST00000571272 NCAPHQ15003 741 aa20.26■□□□□ 0.83
SCARF1-205ENST00000571272 CEP126Q9P2H0 1117 aa20.26■□□□□ 0.83
SCARF1-205ENST00000571272 ERCC6LQ2NKX8 1250 aa20.25■□□□□ 0.83
SCARF1-205ENST00000571272 ANO1Q5XXA6 986 aa20.25■□□□□ 0.83
SCARF1-205ENST00000571272 AIFM3Q96NN9 605 aa20.25■□□□□ 0.83
SCARF1-205ENST00000571272 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.25■□□□□ 0.83
SCARF1-205ENST00000571272 DHX16O60231 1041 aaKnown RBP20.25■□□□□ 0.83
SCARF1-205ENST00000571272 WDHD1O75717 1129 aaPredicted RBP20.25■□□□□ 0.83
SCARF1-205ENST00000571272 ANTXR2P58335 489 aa20.25■□□□□ 0.83
SCARF1-205ENST00000571272 SCARF1Q14162 830 aa20.25■□□□□ 0.83
SCARF1-205ENST00000571272 TTC39AQ5SRH9 613 aa20.25■□□□□ 0.83
SCARF1-205ENST00000571272 KRT222Q8N1A0 295 aa20.25■□□□□ 0.83
SCARF1-205ENST00000571272 CCDC150Q8NCX0 1101 aa20.25■□□□□ 0.83
SCARF1-205ENST00000571272 PUS7LQ9H0K6 701 aaKnown RBP20.25■□□□□ 0.83
SCARF1-205ENST00000571272 KCND1Q9NSA2 647 aa20.25■□□□□ 0.83
SCARF1-205ENST00000571272 KIF2AO00139 706 aaPredicted RBP20.24■□□□□ 0.83
SCARF1-205ENST00000571272 AXDND1Q5T1B0 1012 aaPredicted RBP20.24■□□□□ 0.83
SCARF1-205ENST00000571272 PI16Q6UXB8 463 aa20.24■□□□□ 0.83
SCARF1-205ENST00000571272 BPIFA3Q9BQP9 254 aa20.24■□□□□ 0.83
SCARF1-205ENST00000571272 ABCC6O95255 1503 aa20.24■□□□□ 0.83
SCARF1-205ENST00000571272 LMTK3Q96Q04 1460 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms