RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 OGFOD1Q8N543 542 aa17.52■□□□□ 0.4
GTF3C1-211ENST00000569653 CCDC102AQ96A19 550 aa17.52■□□□□ 0.4
GTF3C1-211ENST00000569653 FZD1Q9UP38 647 aa17.52■□□□□ 0.4
GTF3C1-211ENST00000569653 E9PSI1 815 aa17.51■□□□□ 0.39
GTF3C1-211ENST00000569653 TRMT2AQ8IZ69 625 aaKnown RBP17.51■□□□□ 0.39
GTF3C1-211ENST00000569653 CNNM1Q9NRU3 951 aa17.51■□□□□ 0.39
GTF3C1-211ENST00000569653 RNF186Q9NXI6 227 aa17.51■□□□□ 0.39
GTF3C1-211ENST00000569653 RIPOR2Q9Y4F9 1068 aa17.51■□□□□ 0.39
GTF3C1-211ENST00000569653 F8W031 263 aaPredicted RBP17.5■□□□□ 0.39
GTF3C1-211ENST00000569653 GYG1P46976 350 aa17.5■□□□□ 0.39
GTF3C1-211ENST00000569653 FKBP1BP68106 108 aa17.5■□□□□ 0.39
GTF3C1-211ENST00000569653 LRRC24Q50LG9 513 aa17.5■□□□□ 0.39
GTF3C1-211ENST00000569653 TAF7LQ5H9L4 462 aa17.5■□□□□ 0.39
GTF3C1-211ENST00000569653 KLHDC4Q8TBB5 520 aa17.5■□□□□ 0.39
GTF3C1-211ENST00000569653 USP44Q9H0E7 712 aa17.5■□□□□ 0.39
GTF3C1-211ENST00000569653 LAMB1P07942 1786 aa17.5■□□□□ 0.39
GTF3C1-211ENST00000569653 OTOFQ9HC10 1997 aa17.49■□□□□ 0.39
GTF3C1-211ENST00000569653 GRIK5Q16478 980 aa17.49■□□□□ 0.39
GTF3C1-211ENST00000569653 ZNF804AQ7Z570 1209 aa17.49■□□□□ 0.39
GTF3C1-211ENST00000569653 VGLL2Q8N8G2 317 aa17.49■□□□□ 0.39
GTF3C1-211ENST00000569653 TDRD7Q8NHU6 1098 aaKnown RBP17.49■□□□□ 0.39
GTF3C1-211ENST00000569653 PTPRCP08575 1304 aa17.48■□□□□ 0.39
GTF3C1-211ENST00000569653 FAM205AQ6ZU69 1335 aa17.48■□□□□ 0.39
GTF3C1-211ENST00000569653 TRPA1O75762 1119 aa17.48■□□□□ 0.39
GTF3C1-211ENST00000569653 MTMR14Q8NCE2 650 aa17.48■□□□□ 0.39
GTF3C1-211ENST00000569653 FAM84BQ96KN1 310 aaPredicted RBP17.48■□□□□ 0.39
GTF3C1-211ENST00000569653 PRMT6Q96LA8 375 aaPredicted RBP17.48■□□□□ 0.39
GTF3C1-211ENST00000569653 MCOLN1Q9GZU1 580 aa17.48■□□□□ 0.39
GTF3C1-211ENST00000569653 TNRC18O15417 2968 aaPredicted RBP17.47■□□□□ 0.39
GTF3C1-211ENST00000569653 SPDYE2BA6NHP3 402 aa17.47■□□□□ 0.39
GTF3C1-211ENST00000569653 SPDYE6P0CI01 402 aa17.47■□□□□ 0.39
GTF3C1-211ENST00000569653 FKBP1AP62942 108 aaKnown RBP17.47■□□□□ 0.39
GTF3C1-211ENST00000569653 PTPN12Q05209 780 aaKnown RBP17.47■□□□□ 0.39
GTF3C1-211ENST00000569653 PRKG1Q13976 671 aa17.47■□□□□ 0.39
GTF3C1-211ENST00000569653 UBE4AQ14139 1066 aa17.47■□□□□ 0.39
GTF3C1-211ENST00000569653 CFAP100Q494V2 611 aa17.47■□□□□ 0.39
GTF3C1-211ENST00000569653 SAGE1Q9NXZ1 904 aa17.47■□□□□ 0.39
GTF3C1-211ENST00000569653 HDAC9Q9UKV0 1011 aa17.47■□□□□ 0.39
GTF3C1-211ENST00000569653 COL1A1P02452 1464 aaPredicted RBP17.46■□□□□ 0.39
GTF3C1-211ENST00000569653 CLRN2A0PK11 232 aa17.46■□□□□ 0.39
GTF3C1-211ENST00000569653 RFX5P48382 616 aaPredicted RBP17.46■□□□□ 0.39
GTF3C1-211ENST00000569653 MMP14P50281 582 aa17.46■□□□□ 0.39
GTF3C1-211ENST00000569653 DLGAP5Q15398 846 aa17.46■□□□□ 0.39
GTF3C1-211ENST00000569653 APOBEC3FQ8IUX4 373 aaKnown RBP17.46■□□□□ 0.39
GTF3C1-211ENST00000569653 DEFB129Q9H1M3 183 aa17.46■□□□□ 0.39
GTF3C1-211ENST00000569653 MYH13Q9UKX3 1938 aa17.46■□□□□ 0.39
GTF3C1-211ENST00000569653 MKRN3Q13064 507 aaKnown RBP17.45■□□□□ 0.38
GTF3C1-211ENST00000569653 LDLRAD1Q5T700 205 aa17.45■□□□□ 0.38
GTF3C1-211ENST00000569653 FBXO33Q7Z6M2 555 aa17.45■□□□□ 0.38
GTF3C1-211ENST00000569653 IQSEC3Q9UPP2 1182 aaPredicted RBP17.45■□□□□ 0.38
GTF3C1-211ENST00000569653 HIBADHP31937 336 aaKnown RBP17.44■□□□□ 0.38
GTF3C1-211ENST00000569653 DGKZQ13574 1117 aa17.44■□□□□ 0.38
GTF3C1-211ENST00000569653 TTLL12Q14166 644 aaPredicted RBP17.44■□□□□ 0.38
GTF3C1-211ENST00000569653 ALDH1L2Q3SY69 923 aa17.44■□□□□ 0.38
GTF3C1-211ENST00000569653 CDAN1Q8IWY9 1227 aa17.44■□□□□ 0.38
GTF3C1-211ENST00000569653 MROH5Q6ZUA9 1318 aa17.44■□□□□ 0.38
GTF3C1-211ENST00000569653 MFSD14BQ5SR56 506 aa17.43■□□□□ 0.38
GTF3C1-211ENST00000569653 CLMNQ96JQ2 1002 aa17.43■□□□□ 0.38
GTF3C1-211ENST00000569653 SMC4Q9NTJ3 1288 aa17.43■□□□□ 0.38
GTF3C1-211ENST00000569653 HTTP42858 3142 aa17.43■□□□□ 0.38
GTF3C1-211ENST00000569653 CCDC85CA6NKD9 419 aa17.42■□□□□ 0.38
GTF3C1-211ENST00000569653 METTL24Q5JXM2 366 aa17.42■□□□□ 0.38
GTF3C1-211ENST00000569653 NBPF12Q5TAG4 269 aaPredicted RBP17.42■□□□□ 0.38
GTF3C1-211ENST00000569653 R3HDMLQ9H3Y0 253 aa17.42■□□□□ 0.38
GTF3C1-211ENST00000569653 ANGEL1Q9UNK9 670 aaKnown RBP17.42■□□□□ 0.38
GTF3C1-211ENST00000569653 PDE8BO95263 885 aa17.41■□□□□ 0.38
GTF3C1-211ENST00000569653 FGFR2P21802 821 aa17.41■□□□□ 0.38
GTF3C1-211ENST00000569653 ATG9AQ7Z3C6 839 aa17.41■□□□□ 0.38
GTF3C1-211ENST00000569653 VEZTQ9HBM0 779 aa17.41■□□□□ 0.38
GTF3C1-211ENST00000569653 TTF2Q9UNY4 1162 aaKnown RBP17.41■□□□□ 0.38
GTF3C1-211ENST00000569653 NF2P35240 595 aa17.4■□□□□ 0.38
GTF3C1-211ENST00000569653 TM4SF4P48230 202 aa17.4■□□□□ 0.38
GTF3C1-211ENST00000569653 BCAMP50895 628 aa17.4■□□□□ 0.38
GTF3C1-211ENST00000569653 RASA3Q14644 834 aa17.4■□□□□ 0.38
GTF3C1-211ENST00000569653 MAP3K11Q16584 847 aa17.4■□□□□ 0.38
GTF3C1-211ENST00000569653 SPDYE2Q495Y8 402 aa17.4■□□□□ 0.38
GTF3C1-211ENST00000569653 TDRD3Q9H7E2 651 aaKnown RBP17.4■□□□□ 0.38
GTF3C1-211ENST00000569653 ZNF70Q9UC06 446 aaPredicted RBP17.4■□□□□ 0.38
GTF3C1-211ENST00000569653 NOB1Q9ULX3 412 aaKnown RBP17.4■□□□□ 0.38
GTF3C1-211ENST00000569653 CCER2I3L3R5 266 aa17.39■□□□□ 0.37
GTF3C1-211ENST00000569653 TBC1D8O95759 1140 aa17.39■□□□□ 0.37
GTF3C1-211ENST00000569653 GJA5P36382 358 aa17.39■□□□□ 0.37
GTF3C1-211ENST00000569653 CHAF1AQ13111 956 aaPredicted RBP17.39■□□□□ 0.37
GTF3C1-211ENST00000569653 SPRYD7Q5W111 196 aa17.39■□□□□ 0.37
GTF3C1-211ENST00000569653 ARMC9Q7Z3E5 817 aa17.39■□□□□ 0.37
GTF3C1-211ENST00000569653 TEPSINQ96N21 525 aa17.39■□□□□ 0.37
GTF3C1-211ENST00000569653 EYA2O00167 538 aa17.38■□□□□ 0.37
GTF3C1-211ENST00000569653 USP2O75604 605 aaPredicted RBP17.38■□□□□ 0.37
GTF3C1-211ENST00000569653 CRKP46108 304 aa17.38■□□□□ 0.37
GTF3C1-211ENST00000569653 RBM5P52756 815 aaKnown RBP eCLIP17.38■□□□□ 0.37
GTF3C1-211ENST00000569653 DZIP1LQ8IYY4 767 aaKnown RBP17.38■□□□□ 0.37
GTF3C1-211ENST00000569653 SERPINA10Q9UK55 444 aa17.38■□□□□ 0.37
GTF3C1-211ENST00000569653 PPP2R3BQ9Y5P8 575 aa17.38■□□□□ 0.37
GTF3C1-211ENST00000569653 REM2Q8IYK8 340 aaPredicted RBP17.37■□□□□ 0.37
GTF3C1-211ENST00000569653 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.37■□□□□ 0.37
GTF3C1-211ENST00000569653 TNNQ9UQP3 1299 aa17.37■□□□□ 0.37
GTF3C1-211ENST00000569653 RGS19P49795 217 aa17.36■□□□□ 0.37
GTF3C1-211ENST00000569653 RARSP54136 660 aaKnown RBP17.36■□□□□ 0.37
GTF3C1-211ENST00000569653 CACNB3P54284 484 aa17.36■□□□□ 0.37
GTF3C1-211ENST00000569653 PUM3Q15397 648 aaKnown RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 145.6 ms