RNA–Protein interactions for RNA: ENST00000567271.1

NME3-210, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-210ENST00000567271 CERS5Q8N5B7 392 aa26.8■■□□□ 1.88
NME3-210ENST00000567271 JAG2Q9Y219 1238 aa26.8■■□□□ 1.88
NME3-210ENST00000567271 SURF6O75683 361 aaKnown RBP26.79■■□□□ 1.88
NME3-210ENST00000567271 KIF4BQ2VIQ3 1234 aa26.79■■□□□ 1.88
NME3-210ENST00000567271 NOP58Q9Y2X3 529 aaKnown RBP26.79■■□□□ 1.88
NME3-210ENST00000567271 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.79■■□□□ 1.88
NME3-210ENST00000567271 MMP14P50281 582 aa26.78■■□□□ 1.88
NME3-210ENST00000567271 RPAP2Q8IXW5 612 aaPredicted RBP26.78■■□□□ 1.88
NME3-210ENST00000567271 OGFOD1Q8N543 542 aa26.78■■□□□ 1.88
NME3-210ENST00000567271 MYOZ2Q9NPC6 264 aa26.78■■□□□ 1.88
NME3-210ENST00000567271 IQSEC3Q9UPP2 1182 aaPredicted RBP26.78■■□□□ 1.88
NME3-210ENST00000567271 AKAP2Q9Y2D5 859 aa26.78■■□□□ 1.88
NME3-210ENST00000567271 PASKQ96RG2 1323 aa26.77■■□□□ 1.88
NME3-210ENST00000567271 TIMM10P62072 90 aa26.77■■□□□ 1.88
NME3-210ENST00000567271 KIAA0825Q8IV33 1275 aa26.77■■□□□ 1.88
NME3-210ENST00000567271 APLP1P51693 650 aa26.76■■□□□ 1.87
NME3-210ENST00000567271 A0A1B0GUL7 405 aa26.75■■□□□ 1.87
NME3-210ENST00000567271 FRAT2O75474 233 aaPredicted RBP26.75■■□□□ 1.87
NME3-210ENST00000567271 ADORA1P30542 326 aa26.75■■□□□ 1.87
NME3-210ENST00000567271 OS9Q13438 667 aaPredicted RBP26.75■■□□□ 1.87
NME3-210ENST00000567271 MFSD14BQ5SR56 506 aa26.74■■□□□ 1.87
NME3-210ENST00000567271 SIRT2Q8IXJ6 389 aa26.74■■□□□ 1.87
NME3-210ENST00000567271 HDAC9Q9UKV0 1011 aa26.74■■□□□ 1.87
NME3-210ENST00000567271 CHAF1AQ13111 956 aaPredicted RBP26.73■■□□□ 1.87
NME3-210ENST00000567271 SCARF1Q14162 830 aa26.73■■□□□ 1.87
NME3-210ENST00000567271 XAGE2Q96GT9 111 aa26.72■■□□□ 1.87
NME3-210ENST00000567271 NEUROD6Q96NK8 337 aa26.72■■□□□ 1.87
NME3-210ENST00000567271 GPR108Q9NPR9 543 aa26.72■■□□□ 1.87
NME3-210ENST00000567271 GNL3LQ9NVN8 582 aaKnown RBP26.72■■□□□ 1.87
NME3-210ENST00000567271 F8W031 263 aaPredicted RBP26.71■■□□□ 1.87
NME3-210ENST00000567271 ZBTB22O15209 634 aa26.71■■□□□ 1.87
NME3-210ENST00000567271 HMMRO75330 724 aa26.71■■□□□ 1.87
NME3-210ENST00000567271 PHKA1P46020 1223 aa26.71■■□□□ 1.87
NME3-210ENST00000567271 CCDC102BQ68D86 513 aa26.71■■□□□ 1.87
NME3-210ENST00000567271 TBC1D22AQ8WUA7 517 aa26.71■■□□□ 1.87
NME3-210ENST00000567271 ASTN2O75129 1339 aaPredicted RBP26.7■■□□□ 1.87
NME3-210ENST00000567271 CDC37L1Q7L3B6 337 aa26.7■■□□□ 1.86
NME3-210ENST00000567271 GLIS2Q9BZE0 524 aaPredicted RBP26.7■■□□□ 1.86
NME3-210ENST00000567271 ARAP2Q8WZ64 1704 aa26.7■■□□□ 1.86
NME3-210ENST00000567271 TRAF5O00463 557 aa26.69■■□□□ 1.86
NME3-210ENST00000567271 NBPF9Q3BBW0 867 aa26.69■■□□□ 1.86
NME3-210ENST00000567271 DCPSQ96C86 337 aaKnown RBP26.69■■□□□ 1.86
NME3-210ENST00000567271 EXOC6BQ9Y2D4 811 aa26.69■■□□□ 1.86
NME3-210ENST00000567271 WNT10BO00744 389 aa26.68■■□□□ 1.86
NME3-210ENST00000567271 SEMA3EO15041 775 aa26.68■■□□□ 1.86
NME3-210ENST00000567271 HTRA3P83110 453 aa26.68■■□□□ 1.86
NME3-210ENST00000567271 FMR1Q06787 632 aaKnown RBP eCLIP26.68■■□□□ 1.868e-6■■□□□ 11.8
NME3-210ENST00000567271 TNNI3KQ59H18 835 aa26.68■■□□□ 1.86
NME3-210ENST00000567271 ZBED3Q96IU2 234 aaPredicted RBP26.68■■□□□ 1.86
NME3-210ENST00000567271 GGA3Q9NZ52 723 aa26.68■■□□□ 1.86
NME3-210ENST00000567271 FPGT-TNNI3KV9GXZ4 949 aa26.68■■□□□ 1.86
NME3-210ENST00000567271 CEP350Q5VT06 3117 aa26.67■■□□□ 1.86
NME3-210ENST00000567271 GRIK5Q16478 980 aa26.67■■□□□ 1.86
NME3-210ENST00000567271 HSP90AB4PQ58FF6 505 aa26.67■■□□□ 1.86
NME3-210ENST00000567271 ANGEL2Q5VTE6 544 aaKnown RBP26.67■■□□□ 1.86
NME3-210ENST00000567271 USP48Q86UV5 1035 aa26.67■■□□□ 1.86
NME3-210ENST00000567271 ERC1Q8IUD2 1116 aa26.67■■□□□ 1.86
NME3-210ENST00000567271 MTMR14Q8NCE2 650 aa26.67■■□□□ 1.86
NME3-210ENST00000567271 WDR66Q8TBY9 1149 aa26.67■■□□□ 1.86
NME3-210ENST00000567271 TTF2Q9UNY4 1162 aaKnown RBP26.67■■□□□ 1.86
NME3-210ENST00000567271 COL1A1P02452 1464 aaPredicted RBP26.67■■□□□ 1.86
NME3-210ENST00000567271 DLGAP5Q15398 846 aa26.66■■□□□ 1.86
NME3-210ENST00000567271 KRT26Q7Z3Y9 468 aa26.66■■□□□ 1.86
NME3-210ENST00000567271 DENND2AQ9ULE3 1009 aa26.66■■□□□ 1.86
NME3-210ENST00000567271 CFAP100Q494V2 611 aa26.65■■□□□ 1.86
NME3-210ENST00000567271 GORABQ5T7V8 394 aa26.65■■□□□ 1.86
NME3-210ENST00000567271 CREBZFQ9NS37 354 aa26.65■■□□□ 1.86
NME3-210ENST00000567271 SUGT1Q9Y2Z0 365 aa26.65■■□□□ 1.86
NME3-210ENST00000567271 PITPNM2Q9BZ72 1349 aa26.65■■□□□ 1.86
NME3-210ENST00000567271 TMEM88BA6NKF7 163 aa26.64■■□□□ 1.86
NME3-210ENST00000567271 RASGRF1Q13972 1273 aa26.64■■□□□ 1.86
NME3-210ENST00000567271 CRBNQ96SW2 442 aa26.64■■□□□ 1.86
NME3-210ENST00000567271 SERPINA10Q9UK55 444 aa26.64■■□□□ 1.86
NME3-210ENST00000567271 DLK2Q6UY11 383 aa26.63■■□□□ 1.85
NME3-210ENST00000567271 SULF1Q8IWU6 871 aa26.63■■□□□ 1.85
NME3-210ENST00000567271 PCDHAC2Q9Y5I4 1007 aa26.63■■□□□ 1.85
NME3-210ENST00000567271 POLR2AP24928 1970 aaKnown RBP26.63■■□□□ 1.85
NME3-210ENST00000567271 ADM5C9JUS6 153 aa26.62■■□□□ 1.85
NME3-210ENST00000567271 CST9Q5W186 159 aa26.62■■□□□ 1.85
NME3-210ENST00000567271 RHPN1Q8TCX5 695 aa26.62■■□□□ 1.85
NME3-210ENST00000567271 EAF2Q96CJ1 260 aaPredicted RBP26.62■■□□□ 1.85
NME3-210ENST00000567271 PRMT6Q96LA8 375 aaPredicted RBP26.62■■□□□ 1.85
NME3-210ENST00000567271 DBNDD2Q9BQY9 259 aa26.62■■□□□ 1.85
NME3-210ENST00000567271 PDS5AQ29RF7 1337 aaKnown RBP26.62■■□□□ 1.85
NME3-210ENST00000567271 SALL1Q9NSC2 1324 aa26.62■■□□□ 1.85
NME3-210ENST00000567271 MYH13Q9UKX3 1938 aa26.61■■□□□ 1.85
NME3-210ENST00000567271 SPDYE2BA6NHP3 402 aa26.61■■□□□ 1.85
NME3-210ENST00000567271 SPDYE6P0CI01 402 aa26.61■■□□□ 1.85
NME3-210ENST00000567271 RBM5P52756 815 aaKnown RBP eCLIP26.61■■□□□ 1.85
NME3-210ENST00000567271 HDLBPQ00341 1268 aaKnown RBP26.61■■□□□ 1.85
NME3-210ENST00000567271 DNAJC5GQ8N7S2 189 aa26.61■■□□□ 1.85
NME3-210ENST00000567271 RAB11FIP3O75154 756 aa26.6■■□□□ 1.85
NME3-210ENST00000567271 ARID4AP29374 1257 aaPredicted RBP26.6■■□□□ 1.85
NME3-210ENST00000567271 CRKP46108 304 aa26.6■■□□□ 1.85
NME3-210ENST00000567271 MRIQ9BWK5 157 aa26.6■■□□□ 1.85
NME3-210ENST00000567271 CCDC8Q9H0W5 538 aaPredicted RBP26.6■■□□□ 1.85
NME3-210ENST00000567271 CELF2O95319 508 aaKnown RBP26.59■■□□□ 1.85
NME3-210ENST00000567271 KIF1BPQ96EK5 621 aa26.59■■□□□ 1.85
NME3-210ENST00000567271 HMG20BQ9P0W2 317 aa26.59■■□□□ 1.85
NME3-210ENST00000567271 DBNLQ9UJU6 430 aaKnown RBP26.59■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 197.8 ms