RNA–Protein interactions for RNA: ENST00000566833.1

CCNDBP1-209, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-209ENST00000566833 STRIP1Q5VSL9 837 aa16.51■□□□□ 0.23
CCNDBP1-209ENST00000566833 GPC2Q8N158 579 aa16.51■□□□□ 0.23
CCNDBP1-209ENST00000566833 PPP4R2Q9NY27 417 aa16.51■□□□□ 0.23
CCNDBP1-209ENST00000566833 SCN9AQ15858 1988 aa16.51■□□□□ 0.23
CCNDBP1-209ENST00000566833 DDNO94850 711 aaPredicted RBP16.5■□□□□ 0.23
CCNDBP1-209ENST00000566833 CENPQQ7L2Z9 268 aaPredicted RBP16.5■□□□□ 0.23
CCNDBP1-209ENST00000566833 CHD1LQ86WJ1 897 aa16.5■□□□□ 0.23
CCNDBP1-209ENST00000566833 LNPKQ9C0E8 428 aa16.5■□□□□ 0.23
CCNDBP1-209ENST00000566833 UTRNP46939 3433 aa16.5■□□□□ 0.23
CCNDBP1-209ENST00000566833 PSME4Q14997 1843 aa16.49■□□□□ 0.23
CCNDBP1-209ENST00000566833 FAM205AQ6ZU69 1335 aa16.49■□□□□ 0.23
CCNDBP1-209ENST00000566833 MYO3BQ8WXR4 1341 aa16.49■□□□□ 0.23
CCNDBP1-209ENST00000566833 ARID4AP29374 1257 aaPredicted RBP16.49■□□□□ 0.23
CCNDBP1-209ENST00000566833 LMOD1P29536 600 aaPredicted RBP16.49■□□□□ 0.23
CCNDBP1-209ENST00000566833 NUCB1Q02818 461 aa16.49■□□□□ 0.23
CCNDBP1-209ENST00000566833 RSBN1LQ6PCB5 846 aaPredicted RBP16.49■□□□□ 0.23
CCNDBP1-209ENST00000566833 WDR66Q8TBY9 1149 aa16.49■□□□□ 0.23
CCNDBP1-209ENST00000566833 ZNF526Q8TF50 670 aaPredicted RBP16.49■□□□□ 0.23
CCNDBP1-209ENST00000566833 TBC1D22AQ8WUA7 517 aa16.49■□□□□ 0.23
CCNDBP1-209ENST00000566833 VIL1P09327 827 aaKnown RBP16.48■□□□□ 0.23
CCNDBP1-209ENST00000566833 RPS12P25398 132 aaKnown RBP16.48■□□□□ 0.23
CCNDBP1-209ENST00000566833 GMPSP49915 693 aaPredicted RBP16.48■□□□□ 0.23
CCNDBP1-209ENST00000566833 RASGRF1Q13972 1273 aa16.48■□□□□ 0.23
CCNDBP1-209ENST00000566833 MFSD14BQ5SR56 506 aa16.48■□□□□ 0.23
CCNDBP1-209ENST00000566833 DACT2Q5SW24 774 aa16.48■□□□□ 0.23
CCNDBP1-209ENST00000566833 ECHDC1Q9NTX5 307 aa16.48■□□□□ 0.23
CCNDBP1-209ENST00000566833 ZBTB12Q9Y330 459 aaPredicted RBP16.48■□□□□ 0.23
CCNDBP1-209ENST00000566833 C16orf71Q8IYS4 520 aaPredicted RBP16.47■□□□□ 0.23
CCNDBP1-209ENST00000566833 ZGPATQ8N5A5 531 aaKnown RBP16.47■□□□□ 0.23
CCNDBP1-209ENST00000566833 SPATA5Q8NB90 893 aa16.47■□□□□ 0.23
CCNDBP1-209ENST00000566833 AGBL3Q8NEM8 1001 aa16.47■□□□□ 0.23
CCNDBP1-209ENST00000566833 ZNF512BQ96KM6 892 aaPredicted RBP16.47■□□□□ 0.23
CCNDBP1-209ENST00000566833 MXD3Q9BW11 206 aa16.47■□□□□ 0.23
CCNDBP1-209ENST00000566833 SNRKQ9NRH2 765 aa16.47■□□□□ 0.23
CCNDBP1-209ENST00000566833 HMG20BQ9P0W2 317 aa16.47■□□□□ 0.23
CCNDBP1-209ENST00000566833 ZBTB22O15209 634 aa16.46■□□□□ 0.23
CCNDBP1-209ENST00000566833 MX1P20591 662 aa16.46■□□□□ 0.23
CCNDBP1-209ENST00000566833 MCAMP43121 646 aa16.46■□□□□ 0.23
CCNDBP1-209ENST00000566833 FKBP1AP62942 108 aaKnown RBP16.46■□□□□ 0.23
CCNDBP1-209ENST00000566833 PPP4R3CPQ6ZMV5 832 aa16.46■□□□□ 0.23
CCNDBP1-209ENST00000566833 PDS5AQ29RF7 1337 aaKnown RBP16.45■□□□□ 0.22
CCNDBP1-209ENST00000566833 TTC41PQ6P2S7 1318 aa16.45■□□□□ 0.22
CCNDBP1-209ENST00000566833 IQCA1LA6NCM1 817 aa16.45■□□□□ 0.22
CCNDBP1-209ENST00000566833 F8W031 263 aaPredicted RBP16.45■□□□□ 0.22
CCNDBP1-209ENST00000566833 H7C1D1 291 aa16.45■□□□□ 0.22
CCNDBP1-209ENST00000566833 ERC2O15083 957 aa16.45■□□□□ 0.22
CCNDBP1-209ENST00000566833 ATP5JP18859 108 aa16.45■□□□□ 0.22
CCNDBP1-209ENST00000566833 SCARF1Q14162 830 aa16.45■□□□□ 0.22
CCNDBP1-209ENST00000566833 KIAA0825Q8IV33 1275 aa16.45■□□□□ 0.22
CCNDBP1-209ENST00000566833 OGFOD1Q8N543 542 aa16.45■□□□□ 0.22
CCNDBP1-209ENST00000566833 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.45■□□□□ 0.22
CCNDBP1-209ENST00000566833 DPF2Q92785 391 aa16.45■□□□□ 0.22
CCNDBP1-209ENST00000566833 GPBP1L1Q9HC44 474 aaPredicted RBP16.45■□□□□ 0.22
CCNDBP1-209ENST00000566833 ABCF2Q9UG63 623 aa16.45■□□□□ 0.22
CCNDBP1-209ENST00000566833 HDAC9Q9UKV0 1011 aa16.45■□□□□ 0.22
CCNDBP1-209ENST00000566833 COL1A1P02452 1464 aaPredicted RBP16.45■□□□□ 0.22
CCNDBP1-209ENST00000566833 USP17L8P0C7I0 530 aa16.44■□□□□ 0.22
CCNDBP1-209ENST00000566833 SPTY2D1Q68D10 685 aaPredicted RBP16.44■□□□□ 0.22
CCNDBP1-209ENST00000566833 PI16Q6UXB8 463 aa16.44■□□□□ 0.22
CCNDBP1-209ENST00000566833 OTUD7AQ8TE49 926 aaPredicted RBP16.44■□□□□ 0.22
CCNDBP1-209ENST00000566833 L3MBTL3Q96JM7 780 aaPredicted RBP16.44■□□□□ 0.22
CCNDBP1-209ENST00000566833 DNAJC2Q99543 621 aaKnown RBP16.44■□□□□ 0.22
CCNDBP1-209ENST00000566833 BOLA2Q9H3K6 86 aa16.44■□□□□ 0.22
CCNDBP1-209ENST00000566833 GPRC5DQ9NZD1 345 aa16.44■□□□□ 0.22
CCNDBP1-209ENST00000566833 CNOT7Q9UIV1 285 aaKnown RBP16.44■□□□□ 0.22
CCNDBP1-209ENST00000566833 HACL1Q9UJ83 578 aa16.44■□□□□ 0.22
CCNDBP1-209ENST00000566833 WDR90Q96KV7 1748 aa16.43■□□□□ 0.22
CCNDBP1-209ENST00000566833 LDHBP07195 334 aaKnown RBP16.43■□□□□ 0.22
CCNDBP1-209ENST00000566833 ZAP70P43403 619 aa16.43■□□□□ 0.22
CCNDBP1-209ENST00000566833 SCNN1DP51172 638 aa16.43■□□□□ 0.22
CCNDBP1-209ENST00000566833 TSHZ3Q63HK5 1081 aa16.43■□□□□ 0.22
CCNDBP1-209ENST00000566833 MICALL2Q8IY33 904 aa16.43■□□□□ 0.22
CCNDBP1-209ENST00000566833 CERS5Q8N5B7 392 aa16.43■□□□□ 0.22
CCNDBP1-209ENST00000566833 RRAGCQ9HB90 399 aa16.43■□□□□ 0.22
CCNDBP1-209ENST00000566833 LRP2BPQ9P2M1 347 aa16.43■□□□□ 0.22
CCNDBP1-209ENST00000566833 TTF2Q9UNY4 1162 aaKnown RBP16.43■□□□□ 0.22
CCNDBP1-209ENST00000566833 SUGT1Q9Y2Z0 365 aa16.43■□□□□ 0.22
CCNDBP1-209ENST00000566833 MAST3O60307 1309 aa16.43■□□□□ 0.22
CCNDBP1-209ENST00000566833 SALL1Q9NSC2 1324 aa16.43■□□□□ 0.22
CCNDBP1-209ENST00000566833 ZNF646O15015 1829 aaPredicted RBP16.42■□□□□ 0.22
CCNDBP1-209ENST00000566833 GLRX3O76003 335 aaKnown RBP16.42■□□□□ 0.22
CCNDBP1-209ENST00000566833 VEGFAP15692 232 aaPredicted RBP16.42■□□□□ 0.22
CCNDBP1-209ENST00000566833 ERICH6Q7L0X2 663 aa16.42■□□□□ 0.22
CCNDBP1-209ENST00000566833 GMLQ99445 158 aa16.42■□□□□ 0.22
CCNDBP1-209ENST00000566833 RAI14Q9P0K7 980 aa16.42■□□□□ 0.22
CCNDBP1-209ENST00000566833 SCN4AP35499 1836 aa16.42■□□□□ 0.22
CCNDBP1-209ENST00000566833 AKAP11Q9UKA4 1901 aa16.41■□□□□ 0.22
CCNDBP1-209ENST00000566833 EPHX2P34913 555 aa16.41■□□□□ 0.22
CCNDBP1-209ENST00000566833 EPS15P42566 896 aa16.41■□□□□ 0.22
CCNDBP1-209ENST00000566833 MMP14P50281 582 aa16.41■□□□□ 0.22
CCNDBP1-209ENST00000566833 PDE1AP54750 535 aa16.41■□□□□ 0.22
CCNDBP1-209ENST00000566833 TTF1Q15361 905 aaPredicted RBP16.41■□□□□ 0.22
CCNDBP1-209ENST00000566833 TBC1D9Q6ZT07 1266 aa16.41■□□□□ 0.22
CCNDBP1-209ENST00000566833 DZIP1Q86YF9 867 aaKnown RBP16.41■□□□□ 0.22
CCNDBP1-209ENST00000566833 HAUS7Q99871 368 aa16.41■□□□□ 0.22
CCNDBP1-209ENST00000566833 NMRK2Q9NPI5 230 aa16.41■□□□□ 0.22
CCNDBP1-209ENST00000566833 ADARB2Q9NS39 739 aaKnown RBP16.41■□□□□ 0.22
CCNDBP1-209ENST00000566833 NDUFB9Q9Y6M9 179 aa16.41■□□□□ 0.22
CCNDBP1-209ENST00000566833 GOLIM4O00461 696 aa16.4■□□□□ 0.22
CCNDBP1-209ENST00000566833 CYP2E1P05181 493 aaPredicted RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms