RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 CCDC102BQ68D86 513 aa13.4□□□□□ -0.26
CDH1-210ENST00000566612 ZNF771Q7L3S4 317 aaPredicted RBP13.4□□□□□ -0.26
CDH1-210ENST00000566612 CATIPQ7Z7H3 387 aa13.4□□□□□ -0.26
CDH1-210ENST00000566612 ERBB4Q15303 1308 aa13.4□□□□□ -0.26
CDH1-210ENST00000566612 RTN1Q16799 776 aa13.4□□□□□ -0.26
CDH1-210ENST00000566612 SH3TC1Q8TE82 1336 aa13.39□□□□□ -0.27
CDH1-210ENST00000566612 CBFA2T2O43439 604 aa13.39□□□□□ -0.27
CDH1-210ENST00000566612 SKILP12757 684 aa13.39□□□□□ -0.27
CDH1-210ENST00000566612 PPFIBP1Q86W92 1011 aa13.39□□□□□ -0.27
CDH1-210ENST00000566612 PDCL2Q8N4E4 241 aa13.39□□□□□ -0.27
CDH1-210ENST00000566612 DSCC1Q9BVC3 393 aa13.39□□□□□ -0.27
CDH1-210ENST00000566612 GREM2Q9H772 168 aa13.39□□□□□ -0.27
CDH1-210ENST00000566612 SPATA31D1Q6ZQQ2 1576 aa13.39□□□□□ -0.27
CDH1-210ENST00000566612 ZNF532Q9HCE3 1301 aa13.39□□□□□ -0.27
CDH1-210ENST00000566612 CPLX3Q8WVH0 158 aa13.39□□□□□ -0.27
CDH1-210ENST00000566612 USP28Q96RU2 1077 aa13.39□□□□□ -0.27
CDH1-210ENST00000566612 FTOQ9C0B1 505 aaKnown RBP eCLIP13.39□□□□□ -0.27
CDH1-210ENST00000566612 TMX1Q9H3N1 280 aa13.39□□□□□ -0.27
CDH1-210ENST00000566612 SIGLEC1Q9BZZ2 1709 aa13.39□□□□□ -0.27
CDH1-210ENST00000566612 PDE8AO60658 829 aa13.39□□□□□ -0.27
CDH1-210ENST00000566612 CAVIN2O95810 425 aa13.39□□□□□ -0.27
CDH1-210ENST00000566612 NBPF5PQ86XG9 351 aaPredicted RBP13.39□□□□□ -0.27
CDH1-210ENST00000566612 SYNE4Q8N205 404 aa13.39□□□□□ -0.27
CDH1-210ENST00000566612 LLPHQ9BRT6 129 aaKnown RBP13.39□□□□□ -0.27
CDH1-210ENST00000566612 CLSTN2Q9H4D0 955 aa13.39□□□□□ -0.27
CDH1-210ENST00000566612 DACH1Q9UI36 760 aa13.39□□□□□ -0.27
CDH1-210ENST00000566612 CYP2E1P05181 493 aaPredicted RBP13.38□□□□□ -0.27
CDH1-210ENST00000566612 DHX8Q14562 1220 aaKnown RBP13.38□□□□□ -0.27
CDH1-210ENST00000566612 CEP131Q9UPN4 1083 aa13.38□□□□□ -0.27
CDH1-210ENST00000566612 USP32Q8NFA0 1604 aa13.38□□□□□ -0.27
CDH1-210ENST00000566612 TSPY2A6NKD2 308 aa13.38□□□□□ -0.27
CDH1-210ENST00000566612 TOP1P11387 765 aaKnown RBP13.38□□□□□ -0.27
CDH1-210ENST00000566612 NLRP5P59047 1200 aa13.38□□□□□ -0.27
CDH1-210ENST00000566612 CTDSPL2Q05D32 466 aa13.38□□□□□ -0.27
CDH1-210ENST00000566612 TTC14Q96N46 770 aa13.38□□□□□ -0.27
CDH1-210ENST00000566612 KRT23Q9C075 422 aa13.38□□□□□ -0.27
CDH1-210ENST00000566612 ADGRL3Q9HAR2 1447 aa13.38□□□□□ -0.27
CDH1-210ENST00000566612 A0A087WWV3 80 aa13.38□□□□□ -0.27
CDH1-210ENST00000566612 PRDM1O75626 825 aa13.38□□□□□ -0.27
CDH1-210ENST00000566612 ADD1P35611 737 aaKnown RBP13.38□□□□□ -0.27
CDH1-210ENST00000566612 DDIT3P35638 169 aa13.38□□□□□ -0.27
CDH1-210ENST00000566612 ANGEL1Q9UNK9 670 aaKnown RBP13.38□□□□□ -0.27
CDH1-210ENST00000566612 DIP2BQ9P265 1576 aa13.38□□□□□ -0.27
CDH1-210ENST00000566612 MYO5BQ9ULV0 1848 aa13.38□□□□□ -0.27
CDH1-210ENST00000566612 FAM160A1Q05DH4 1040 aa13.37□□□□□ -0.27
CDH1-210ENST00000566612 IKQ13123 557 aaPredicted RBP13.37□□□□□ -0.27
CDH1-210ENST00000566612 NAA16Q6N069 864 aaPredicted RBP13.37□□□□□ -0.27
CDH1-210ENST00000566612 GPHNQ9NQX3 736 aaPredicted RBP13.37□□□□□ -0.27
CDH1-210ENST00000566612 CBX1P83916 185 aa13.37□□□□□ -0.27
CDH1-210ENST00000566612 PUM3Q15397 648 aaKnown RBP13.37□□□□□ -0.27
CDH1-210ENST00000566612 ZBTB1Q9Y2K1 713 aa13.37□□□□□ -0.27
CDH1-210ENST00000566612 WDR17Q8IZU2 1322 aa13.37□□□□□ -0.27
CDH1-210ENST00000566612 AFMP43652 599 aa13.37□□□□□ -0.27
CDH1-210ENST00000566612 SPECC1Q5M775 1068 aa13.37□□□□□ -0.27
CDH1-210ENST00000566612 ZBTB38Q8NAP3 1195 aaPredicted RBP13.37□□□□□ -0.27
CDH1-210ENST00000566612 ESR2Q92731 530 aa13.37□□□□□ -0.27
CDH1-210ENST00000566612 OSBP2Q969R2 916 aa13.37□□□□□ -0.27
CDH1-210ENST00000566612 PRDM10Q9NQV6 1147 aa13.37□□□□□ -0.27
CDH1-210ENST00000566612 MAST3O60307 1309 aa13.36□□□□□ -0.27
CDH1-210ENST00000566612 KIF18AQ8NI77 898 aa13.36□□□□□ -0.27
CDH1-210ENST00000566612 PDCL3Q9H2J4 239 aa13.36□□□□□ -0.27
CDH1-210ENST00000566612 CNNM2Q9H8M5 875 aa13.36□□□□□ -0.27
CDH1-210ENST00000566612 HEG1Q9ULI3 1381 aa13.36□□□□□ -0.27
CDH1-210ENST00000566612 PFKFB2O60825 505 aa13.36□□□□□ -0.27
CDH1-210ENST00000566612 ZMYM1Q5SVZ6 1142 aa13.36□□□□□ -0.27
CDH1-210ENST00000566612 TSC1Q92574 1164 aa13.36□□□□□ -0.27
CDH1-210ENST00000566612 DYNC1I1O14576 645 aa13.36□□□□□ -0.27
CDH1-210ENST00000566612 PDIA3P30101 505 aaKnown RBP13.36□□□□□ -0.27
CDH1-210ENST00000566612 PHKA1P46020 1223 aa13.36□□□□□ -0.27
CDH1-210ENST00000566612 CTSWP56202 376 aa13.36□□□□□ -0.27
CDH1-210ENST00000566612 IFIT1BQ5T764 474 aaKnown RBP13.36□□□□□ -0.27
CDH1-210ENST00000566612 CLEC17AQ6ZS10 378 aa13.36□□□□□ -0.27
CDH1-210ENST00000566612 CARD10Q9BWT7 1032 aa13.36□□□□□ -0.27
CDH1-210ENST00000566612 STX8Q9UNK0 236 aa13.36□□□□□ -0.27
CDH1-210ENST00000566612 MAGEB6P1A0A0J9YX57 407 aa13.35□□□□□ -0.27
CDH1-210ENST00000566612 NBPF26B4DH59 902 aa13.35□□□□□ -0.27
CDH1-210ENST00000566612 M0R2C6 588 aa13.35□□□□□ -0.27
CDH1-210ENST00000566612 PCCAP05165 728 aaPredicted RBP13.35□□□□□ -0.27
CDH1-210ENST00000566612 SOGA3Q5TF21 947 aa13.35□□□□□ -0.27
CDH1-210ENST00000566612 NBPF14Q5TI25 921 aa13.35□□□□□ -0.27
CDH1-210ENST00000566612 NBPF10Q6P3W6 841 aaKnown RBP13.35□□□□□ -0.27
CDH1-210ENST00000566612 ZNF444Q8N0Y2 327 aaPredicted RBP13.35□□□□□ -0.27
CDH1-210ENST00000566612 NBPF15Q8N660 670 aa13.35□□□□□ -0.27
CDH1-210ENST00000566612 NLRP3Q96P20 1036 aa13.35□□□□□ -0.27
CDH1-210ENST00000566612 VAT1LQ9HCJ6 419 aa13.35□□□□□ -0.27
CDH1-210ENST00000566612 IFNKQ9P0W0 207 aa13.35□□□□□ -0.27
CDH1-210ENST00000566612 TAF6LQ9Y6J9 622 aa13.35□□□□□ -0.27
CDH1-210ENST00000566612 hCG_1642624A0A1W2PR95 340 aa13.35□□□□□ -0.27
CDH1-210ENST00000566612 H7C1W4 665 aa13.35□□□□□ -0.27
CDH1-210ENST00000566612 SNAP23O00161 211 aa13.35□□□□□ -0.27
CDH1-210ENST00000566612 UBASH3AP57075 661 aa13.35□□□□□ -0.27
CDH1-210ENST00000566612 BRINP3Q76B58 766 aa13.35□□□□□ -0.27
CDH1-210ENST00000566612 CMTR1Q8N1G2 835 aaKnown RBP13.35□□□□□ -0.27
CDH1-210ENST00000566612 LPIN2Q92539 896 aa13.35□□□□□ -0.27
CDH1-210ENST00000566612 C8orf37Q96NL8 207 aa13.35□□□□□ -0.27
CDH1-210ENST00000566612 SETDB2Q96T68 719 aa13.35□□□□□ -0.27
CDH1-210ENST00000566612 ARGLU1Q9NWB6 273 aaPredicted RBP13.35□□□□□ -0.27
CDH1-210ENST00000566612 TOB2Q14106 344 aaPredicted RBP13.35□□□□□ -0.27
CDH1-210ENST00000566612 DIP2AQ14689 1571 aa13.35□□□□□ -0.27
CDH1-210ENST00000566612 ANO1Q5XXA6 986 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms