RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 LOC102724428A0A0B4J2F2 783 aa6.52□□□□□ -1.37
LINC00561-201ENST00000565815 TERTO14746 1132 aaKnown RBP6.52□□□□□ -1.37
LINC00561-201ENST00000565815 EIF4BP23588 611 aaKnown RBP6.52□□□□□ -1.37
LINC00561-201ENST00000565815 SIK1P57059 783 aa6.52□□□□□ -1.37
LINC00561-201ENST00000565815 GPLD1P80108 840 aa6.52□□□□□ -1.37
LINC00561-201ENST00000565815 LAMC2Q13753 1193 aa6.52□□□□□ -1.37
LINC00561-201ENST00000565815 CEP135Q66GS9 1140 aa6.52□□□□□ -1.37
LINC00561-201ENST00000565815 GDF6Q6KF10 455 aaPredicted RBP6.52□□□□□ -1.37
LINC00561-201ENST00000565815 FBF1Q8TES7 1133 aa6.52□□□□□ -1.37
LINC00561-201ENST00000565815 WHAMMQ8TF30 809 aa6.52□□□□□ -1.37
LINC00561-201ENST00000565815 CRELD1Q96HD1 420 aa6.52□□□□□ -1.37
LINC00561-201ENST00000565815 SMG9Q9H0W8 520 aaKnown RBP6.52□□□□□ -1.37
LINC00561-201ENST00000565815 SH2B1Q9NRF2 756 aaPredicted RBP6.52□□□□□ -1.37
LINC00561-201ENST00000565815 SLC6A14Q9UN76 642 aa6.52□□□□□ -1.37
LINC00561-201ENST00000565815 SPG7Q9UQ90 795 aa6.52□□□□□ -1.37
LINC00561-201ENST00000565815 AKAP2Q9Y2D5 859 aa6.52□□□□□ -1.37
LINC00561-201ENST00000565815 FAM182BQ5T319 152 aa6.52□□□□□ -1.37
LINC00561-201ENST00000565815 ACDQ96AP0 544 aa6.52□□□□□ -1.37
LINC00561-201ENST00000565815 MDFIQ99750 246 aa6.52□□□□□ -1.37
LINC00561-201ENST00000565815 OXCT2Q9BYC2 517 aaPredicted RBP6.52□□□□□ -1.37
LINC00561-201ENST00000565815 TLR6Q9Y2C9 796 aa6.52□□□□□ -1.37
LINC00561-201ENST00000565815 SHISA8B8ZZ34 492 aa6.51□□□□□ -1.37
LINC00561-201ENST00000565815 ALBP02768 609 aa6.51□□□□□ -1.37
LINC00561-201ENST00000565815 SOX18P35713 384 aa6.51□□□□□ -1.37
LINC00561-201ENST00000565815 ACBD3Q9H3P7 528 aa6.51□□□□□ -1.37
LINC00561-201ENST00000565815 SUV39H2Q9H5I1 410 aa6.51□□□□□ -1.37
LINC00561-201ENST00000565815 LMTK3Q96Q04 1460 aa6.51□□□□□ -1.37
LINC00561-201ENST00000565815 PSAPL1Q6NUJ1 521 aa6.51□□□□□ -1.37
LINC00561-201ENST00000565815 MPRIPQ6WCQ1 1025 aa6.51□□□□□ -1.37
LINC00561-201ENST00000565815 CCNJLQ8IV13 435 aa6.51□□□□□ -1.37
LINC00561-201ENST00000565815 STARD13Q9Y3M8 1113 aa6.51□□□□□ -1.37
LINC00561-201ENST00000565815 CFAP43Q8NDM7 1665 aa6.51□□□□□ -1.37
LINC00561-201ENST00000565815 EDN3P14138 238 aa6.5□□□□□ -1.37
LINC00561-201ENST00000565815 PLD4Q96BZ4 506 aa6.5□□□□□ -1.37
LINC00561-201ENST00000565815 MAP3K6O95382 1288 aa6.5□□□□□ -1.37
LINC00561-201ENST00000565815 EPHA1P21709 976 aa6.5□□□□□ -1.37
LINC00561-201ENST00000565815 VAMP1P23763 118 aa6.5□□□□□ -1.37
LINC00561-201ENST00000565815 FAM9AQ8IZU1 332 aaPredicted RBP6.5□□□□□ -1.37
LINC00561-201ENST00000565815 MBIPQ9NS73 344 aa6.5□□□□□ -1.37
LINC00561-201ENST00000565815 PHF24Q9UPV7 400 aa6.5□□□□□ -1.37
LINC00561-201ENST00000565815 KIF27Q86VH2 1401 aa6.5□□□□□ -1.37
LINC00561-201ENST00000565815 ADAMTS2O95450 1211 aa6.49□□□□□ -1.37
LINC00561-201ENST00000565815 ECEL1O95672 775 aa6.49□□□□□ -1.37
LINC00561-201ENST00000565815 GMPRP36959 345 aa6.49□□□□□ -1.37
LINC00561-201ENST00000565815 NRLP54845 237 aa6.49□□□□□ -1.37
LINC00561-201ENST00000565815 FOXR1Q6PIV2 292 aa6.49□□□□□ -1.37
LINC00561-201ENST00000565815 NXPE3Q969Y0 559 aa6.49□□□□□ -1.37
LINC00561-201ENST00000565815 HYAL2Q12891 473 aa6.49□□□□□ -1.37
LINC00561-201ENST00000565815 TNFRSF25Q93038 417 aa6.49□□□□□ -1.37
LINC00561-201ENST00000565815 ZNF775Q96BV0 537 aaPredicted RBP6.49□□□□□ -1.37
LINC00561-201ENST00000565815 TTF2Q9UNY4 1162 aaKnown RBP6.49□□□□□ -1.37
LINC00561-201ENST00000565815 ARAP3Q8WWN8 1544 aa6.49□□□□□ -1.37
LINC00561-201ENST00000565815 ADH6P28332 368 aa6.48□□□□□ -1.37
LINC00561-201ENST00000565815 ERCC5P28715 1186 aaPredicted RBP6.48□□□□□ -1.37
LINC00561-201ENST00000565815 KIAA0319Q5VV43 1072 aa6.48□□□□□ -1.37
LINC00561-201ENST00000565815 DTHD1Q6ZMT9 781 aa6.48□□□□□ -1.37
LINC00561-201ENST00000565815 STK35Q8TDR2 534 aa6.48□□□□□ -1.37
LINC00561-201ENST00000565815 PBX4Q9BYU1 374 aa6.48□□□□□ -1.37
LINC00561-201ENST00000565815 FAM8A1Q9UBU6 413 aa6.48□□□□□ -1.37
LINC00561-201ENST00000565815 ENC1O14682 589 aa6.48□□□□□ -1.37
LINC00561-201ENST00000565815 SIN3BO75182 1162 aa6.48□□□□□ -1.37
LINC00561-201ENST00000565815 VSIG8P0DPA2 414 aa6.48□□□□□ -1.37
LINC00561-201ENST00000565815 ZNF76P36508 570 aa6.48□□□□□ -1.37
LINC00561-201ENST00000565815 GMCL1Q96IK5 515 aa6.48□□□□□ -1.37
LINC00561-201ENST00000565815 KBTBD4Q9NVX7 518 aa6.48□□□□□ -1.37
LINC00561-201ENST00000565815 RBAK-RBAKDNI3L0D1 243 aa6.48□□□□□ -1.37
LINC00561-201ENST00000565815 PDE2AO00408 941 aaPredicted RBP6.48□□□□□ -1.37
LINC00561-201ENST00000565815 SCAMP3O14828 347 aaKnown RBP6.48□□□□□ -1.37
LINC00561-201ENST00000565815 VN1R5Q7Z5H4 357 aa6.48□□□□□ -1.37
LINC00561-201ENST00000565815 WDR7Q9Y4E6 1490 aa6.48□□□□□ -1.37
LINC00561-201ENST00000565815 IQGAP2Q13576 1575 aa6.47□□□□□ -1.37
LINC00561-201ENST00000565815 COL17A1Q9UMD9 1497 aaPredicted RBP6.47□□□□□ -1.37
LINC00561-201ENST00000565815 TMEM238LA0A1B0GVL6 79 aa6.47□□□□□ -1.37
LINC00561-201ENST00000565815 SPACA7Q96KW9 195 aa6.47□□□□□ -1.37
LINC00561-201ENST00000565815 JPH1Q9HDC5 661 aaPredicted RBP6.47□□□□□ -1.37
LINC00561-201ENST00000565815 GGT7Q9UJ14 662 aa6.47□□□□□ -1.37
LINC00561-201ENST00000565815 A0A096LPE4 126 aa6.47□□□□□ -1.37
LINC00561-201ENST00000565815 A0A1W2PPZ6 126 aa6.47□□□□□ -1.37
LINC00561-201ENST00000565815 GHRHP01286 108 aa6.47□□□□□ -1.37
LINC00561-201ENST00000565815 CCDC85BQ15834 202 aaPredicted RBP6.47□□□□□ -1.37
LINC00561-201ENST00000565815 GRIK5Q16478 980 aa6.47□□□□□ -1.37
LINC00561-201ENST00000565815 GALNT6Q8NCL4 622 aa6.47□□□□□ -1.37
LINC00561-201ENST00000565815 CARD10Q9BWT7 1032 aa6.47□□□□□ -1.37
LINC00561-201ENST00000565815 ADAMTSL3P82987 1691 aa6.46□□□□□ -1.37
LINC00561-201ENST00000565815 FAM160A1Q05DH4 1040 aa6.46□□□□□ -1.38
LINC00561-201ENST00000565815 ZNF423Q2M1K9 1284 aa6.46□□□□□ -1.38
LINC00561-201ENST00000565815 ELMSAN1Q6PJG2 1045 aa6.46□□□□□ -1.38
LINC00561-201ENST00000565815 ZNF576Q9H609 170 aa6.46□□□□□ -1.38
LINC00561-201ENST00000565815 UGGT2Q9NYU1 1516 aa6.46□□□□□ -1.38
LINC00561-201ENST00000565815 MINDY4BA8MYZ0 360 aa6.46□□□□□ -1.38
LINC00561-201ENST00000565815 LYPD4Q6UWN0 246 aa6.46□□□□□ -1.38
LINC00561-201ENST00000565815 ZC3H12CQ9C0D7 883 aaKnown RBP6.46□□□□□ -1.38
LINC00561-201ENST00000565815 CD109Q6YHK3 1445 aa6.46□□□□□ -1.38
LINC00561-201ENST00000565815 PCF11O94913 1555 aaKnown RBP6.45□□□□□ -1.38
LINC00561-201ENST00000565815 ZCCHC11Q5TAX3 1644 aaKnown RBP6.45□□□□□ -1.38
LINC00561-201ENST00000565815 M0R082 166 aa6.45□□□□□ -1.38
LINC00561-201ENST00000565815 NEFLP07196 543 aa6.45□□□□□ -1.38
LINC00561-201ENST00000565815 ARAFP10398 606 aa6.45□□□□□ -1.38
LINC00561-201ENST00000565815 EPXP11678 715 aa6.45□□□□□ -1.38
LINC00561-201ENST00000565815 HOXD8P13378 290 aaPredicted RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms