RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 HELBQ8NG08 1087 aaPredicted RBP32.05■■■□□ 2.72
NME3-208ENST00000565379 CELF2O95319 508 aaKnown RBP32.04■■■□□ 2.72
NME3-208ENST00000565379 HDAC1Q13547 482 aaPredicted RBP32.04■■■□□ 2.72
NME3-208ENST00000565379 ERICH6BQ5W0A0 696 aa32.04■■■□□ 2.72
NME3-208ENST00000565379 USP48Q86UV5 1035 aa32.04■■■□□ 2.72
NME3-208ENST00000565379 ERC1Q8IUD2 1116 aa32.04■■■□□ 2.72
NME3-208ENST00000565379 ZC3H15Q8WU90 426 aaKnown RBP32.04■■■□□ 2.72
NME3-208ENST00000565379 CEP126Q9P2H0 1117 aa32.04■■■□□ 2.72
NME3-208ENST00000565379 ZNF646O15015 1829 aaPredicted RBP32.04■■■□□ 2.72
NME3-208ENST00000565379 ECE1P42892 770 aa32.03■■■□□ 2.72
NME3-208ENST00000565379 GMLQ99445 158 aa32.03■■■□□ 2.72
NME3-208ENST00000565379 ZNF408Q9H9D4 720 aa32.03■■■□□ 2.72
NME3-208ENST00000565379 ZNF804BA4D1E1 1349 aa32.02■■■□□ 2.72
NME3-208ENST00000565379 A0A1B0GUL6 1792 aa32.02■■■□□ 2.72
NME3-208ENST00000565379 POLR2AP24928 1970 aaKnown RBP32.02■■■□□ 2.72
NME3-208ENST00000565379 TAF5LO75529 589 aa32.02■■■□□ 2.72
NME3-208ENST00000565379 LBX1P52954 281 aa32.02■■■□□ 2.72
NME3-208ENST00000565379 OS9Q13438 667 aaPredicted RBP32.02■■■□□ 2.72
NME3-208ENST00000565379 KIF4BQ2VIQ3 1234 aa32.02■■■□□ 2.72
NME3-208ENST00000565379 RWDD1Q9H446 243 aaPredicted RBP32.02■■■□□ 2.72
NME3-208ENST00000565379 RAB11FIP3O75154 756 aa32.01■■■□□ 2.71
NME3-208ENST00000565379 PDE8BO95263 885 aa32.01■■■□□ 2.71
NME3-208ENST00000565379 CAPNS2Q96L46 248 aa32.01■■■□□ 2.71
NME3-208ENST00000565379 USP17L3A6NCW0 530 aa32■■■□□ 2.71
NME3-208ENST00000565379 USP17L4A6NCW7 530 aa32■■■□□ 2.71
NME3-208ENST00000565379 ADM5C9JUS6 153 aa32■■■□□ 2.71
NME3-208ENST00000565379 KCNJ4P48050 445 aa32■■■□□ 2.71
NME3-208ENST00000565379 USP17L1Q7RTZ2 530 aa32■■■□□ 2.71
NME3-208ENST00000565379 PODNQ7Z5L7 613 aa32■■■□□ 2.71
NME3-208ENST00000565379 TLL2Q9Y6L7 1015 aa32■■■□□ 2.71
NME3-208ENST00000565379 ZNF609O15014 1411 aa32■■■□□ 2.71
NME3-208ENST00000565379 UBE4AQ14139 1066 aa31.99■■■□□ 2.71
NME3-208ENST00000565379 CYP4F22Q6NT55 531 aa31.99■■■□□ 2.71
NME3-208ENST00000565379 PAXIP1Q6ZW49 1069 aaPredicted RBP31.99■■■□□ 2.71
NME3-208ENST00000565379 CDC37L1Q7L3B6 337 aa31.99■■■□□ 2.71
NME3-208ENST00000565379 VGLL2Q8N8G2 317 aa31.99■■■□□ 2.71
NME3-208ENST00000565379 FBXW7Q969H0 707 aa31.99■■■□□ 2.71
NME3-208ENST00000565379 DCTPP1Q9H773 170 aa31.99■■■□□ 2.71
NME3-208ENST00000565379 IRS2Q9Y4H2 1338 aa31.99■■■□□ 2.71
NME3-208ENST00000565379 ZNF280AP59817 542 aaPredicted RBP31.98■■■□□ 2.71
NME3-208ENST00000565379 GRM1Q13255 1194 aa31.98■■■□□ 2.71
NME3-208ENST00000565379 DACT2Q5SW24 774 aa31.98■■■□□ 2.71
NME3-208ENST00000565379 AGBL3Q8NEM8 1001 aa31.98■■■□□ 2.71
NME3-208ENST00000565379 AKAP2Q9Y2D5 859 aa31.98■■■□□ 2.71
NME3-208ENST00000565379 HSPA8P11142 646 aaKnown RBP31.97■■■□□ 2.71
NME3-208ENST00000565379 PUM3Q15397 648 aaKnown RBP31.97■■■□□ 2.71
NME3-208ENST00000565379 KRT26Q7Z3Y9 468 aa31.97■■■□□ 2.71
NME3-208ENST00000565379 GGA3Q9NZ52 723 aa31.97■■■□□ 2.71
NME3-208ENST00000565379 EXOC6BQ9Y2D4 811 aa31.97■■■□□ 2.71
NME3-208ENST00000565379 COA1Q9GZY4 146 aa31.96■■■□□ 2.71
NME3-208ENST00000565379 GCC1Q96CN9 775 aa31.95■■■□□ 2.71
NME3-208ENST00000565379 KIF1BPQ96EK5 621 aa31.95■■■□□ 2.71
NME3-208ENST00000565379 GPR108Q9NPR9 543 aa31.95■■■□□ 2.71
NME3-208ENST00000565379 SASH1O94885 1247 aa31.94■■■□□ 2.7
NME3-208ENST00000565379 USP17L8P0C7I0 530 aa31.94■■■□□ 2.7
NME3-208ENST00000565379 C15orf52Q6ZUT6 534 aaKnown RBP31.94■■■□□ 2.7
NME3-208ENST00000565379 SAPCD2Q86UD0 394 aa31.94■■■□□ 2.7
NME3-208ENST00000565379 BEGAINQ9BUH8 593 aa31.94■■■□□ 2.7
NME3-208ENST00000565379 SCAF8Q9UPN6 1271 aaKnown RBP31.94■■■□□ 2.7
NME3-208ENST00000565379 MAP2K2P36507 400 aa31.93■■■□□ 2.7
NME3-208ENST00000565379 TFCP2Q12800 502 aa31.93■■■□□ 2.7
NME3-208ENST00000565379 SCARF1Q14162 830 aa31.93■■■□□ 2.7
NME3-208ENST00000565379 LPIN2Q92539 896 aa31.93■■■□□ 2.7
NME3-208ENST00000565379 IFIT1P09914 478 aaKnown RBP31.92■■■□□ 2.7
NME3-208ENST00000565379 MYOZ2Q9NPC6 264 aa31.92■■■□□ 2.7
NME3-208ENST00000565379 AOC2O75106 756 aa31.91■■■□□ 2.7
NME3-208ENST00000565379 SLC5A1P13866 664 aa31.91■■■□□ 2.7
NME3-208ENST00000565379 FGFR2P21802 821 aa31.91■■■□□ 2.7
NME3-208ENST00000565379 ATP2B3Q16720 1220 aa31.91■■■□□ 2.7
NME3-208ENST00000565379 ANGEL2Q5VTE6 544 aaKnown RBP31.91■■■□□ 2.7
NME3-208ENST00000565379 RHPN1Q8TCX5 695 aa31.91■■■□□ 2.7
NME3-208ENST00000565379 DCPSQ96C86 337 aaKnown RBP31.91■■■□□ 2.7
NME3-208ENST00000565379 HHIPL1Q96JK4 782 aa31.91■■■□□ 2.7
NME3-208ENST00000565379 THSD7BQ9C0I4 1608 aa31.9■■■□□ 2.7
NME3-208ENST00000565379 STRIP1Q5VSL9 837 aa31.9■■■□□ 2.7
NME3-208ENST00000565379 GTF2IP78347 998 aa31.89■■■□□ 2.7
NME3-208ENST00000565379 LRRCC1Q9C099 1032 aa31.89■■■□□ 2.7
NME3-208ENST00000565379 CD209Q9NNX6 404 aa31.89■■■□□ 2.7
NME3-208ENST00000565379 TTLL5Q6EMB2 1281 aa31.88■■■□□ 2.69
NME3-208ENST00000565379 NBPF9Q3BBW0 867 aa31.87■■■□□ 2.69
NME3-208ENST00000565379 CLASRPQ8N2M8 674 aaKnown RBP31.87■■■□□ 2.69
NME3-208ENST00000565379 JAG2Q9Y219 1238 aa31.87■■■□□ 2.69
NME3-208ENST00000565379 TNNI3KQ59H18 835 aa31.86■■■□□ 2.69
NME3-208ENST00000565379 CAVIN4Q5BKX8 364 aa31.86■■■□□ 2.69
NME3-208ENST00000565379 CERS5Q8N5B7 392 aa31.86■■■□□ 2.69
NME3-208ENST00000565379 FPGT-TNNI3KV9GXZ4 949 aa31.86■■■□□ 2.69
NME3-208ENST00000565379 A0A1B0GUL7 405 aa31.85■■■□□ 2.69
NME3-208ENST00000565379 IGHDP01880 384 aa31.85■■■□□ 2.69
NME3-208ENST00000565379 KIAA0825Q8IV33 1275 aa31.85■■■□□ 2.69
NME3-208ENST00000565379 SULF1Q8IWU6 871 aa31.85■■■□□ 2.69
NME3-208ENST00000565379 SMC5Q8IY18 1101 aa31.85■■■□□ 2.69
NME3-208ENST00000565379 CDCA5Q96FF9 252 aa31.85■■■□□ 2.69
NME3-208ENST00000565379 ZBTB47Q9UFB7 747 aaPredicted RBP31.85■■■□□ 2.69
NME3-208ENST00000565379 ZNF804AQ7Z570 1209 aa31.84■■■□□ 2.69
NME3-208ENST00000565379 APBB1O00213 710 aa31.83■■■□□ 2.69
NME3-208ENST00000565379 HUNKP57058 714 aa31.83■■■□□ 2.69
NME3-208ENST00000565379 ZIC5Q96T25 663 aa31.83■■■□□ 2.69
NME3-208ENST00000565379 GBA2Q9HCG7 927 aaPredicted RBP31.83■■■□□ 2.69
NME3-208ENST00000565379 TIMM10P62072 90 aa31.81■■■□□ 2.68
NME3-208ENST00000565379 PRAMEF18Q5VWM3 479 aa31.81■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms