RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 ZNF772Q68DY9 489 aaPredicted RBP11.2□□□□□ -0.62
LINC00838-201ENST00000562956 FAM43AQ8N2R8 423 aa11.2□□□□□ -0.62
LINC00838-201ENST00000562956 SH2B1Q9NRF2 756 aaPredicted RBP11.2□□□□□ -0.62
LINC00838-201ENST00000562956 TRAK2O60296 914 aa11.2□□□□□ -0.62
LINC00838-201ENST00000562956 BRD1O95696 1058 aa11.2□□□□□ -0.62
LINC00838-201ENST00000562956 GYS1P13807 737 aa11.2□□□□□ -0.62
LINC00838-201ENST00000562956 GYG1P46976 350 aa11.2□□□□□ -0.62
LINC00838-201ENST00000562956 UBE3CQ15386 1083 aa11.2□□□□□ -0.62
LINC00838-201ENST00000562956 NECAB1Q8N987 351 aa11.2□□□□□ -0.62
LINC00838-201ENST00000562956 RRAGDQ9NQL2 400 aaPredicted RBP11.2□□□□□ -0.62
LINC00838-201ENST00000562956 IQSEC3Q9UPP2 1182 aaPredicted RBP11.2□□□□□ -0.62
LINC00838-201ENST00000562956 UBE4AQ14139 1066 aa11.19□□□□□ -0.62
LINC00838-201ENST00000562956 ANKRD1Q15327 319 aa11.19□□□□□ -0.62
LINC00838-201ENST00000562956 TXNRD1Q16881 649 aa11.19□□□□□ -0.62
LINC00838-201ENST00000562956 CHAMP1Q96JM3 812 aa11.19□□□□□ -0.62
LINC00838-201ENST00000562956 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.19□□□□□ -0.62
LINC00838-201ENST00000562956 TAF1P21675 1872 aa11.19□□□□□ -0.62
LINC00838-201ENST00000562956 E7EWF7 191 aa11.19□□□□□ -0.62
LINC00838-201ENST00000562956 FGAP02671 866 aa11.19□□□□□ -0.62
LINC00838-201ENST00000562956 CNBD1Q8NA66 436 aa11.19□□□□□ -0.62
LINC00838-201ENST00000562956 NAP1L5Q96NT1 182 aaPredicted RBP11.19□□□□□ -0.62
LINC00838-201ENST00000562956 ZNF804BA4D1E1 1349 aa11.19□□□□□ -0.62
LINC00838-201ENST00000562956 LRRC2Q9BYS8 371 aa11.19□□□□□ -0.62
LINC00838-201ENST00000562956 KLRK1P26718 216 aa11.18□□□□□ -0.62
LINC00838-201ENST00000562956 HAND2P61296 217 aa11.18□□□□□ -0.62
LINC00838-201ENST00000562956 MCTP1Q6DN14 999 aa11.18□□□□□ -0.62
LINC00838-201ENST00000562956 Q6ZUG5 572 aa11.18□□□□□ -0.62
LINC00838-201ENST00000562956 SLC51AQ86UW1 340 aa11.18□□□□□ -0.62
LINC00838-201ENST00000562956 MAGEB6Q8N7X4 407 aa11.18□□□□□ -0.62
LINC00838-201ENST00000562956 SMC3Q9UQE7 1217 aa11.18□□□□□ -0.62
LINC00838-201ENST00000562956 MAP3K12Q12852 859 aa11.18□□□□□ -0.62
LINC00838-201ENST00000562956 PRR5LQ6MZQ0 368 aa11.18□□□□□ -0.62
LINC00838-201ENST00000562956 ZMYND15Q9H091 742 aa11.18□□□□□ -0.62
LINC00838-201ENST00000562956 CTNNA3Q9UI47 895 aa11.18□□□□□ -0.62
LINC00838-201ENST00000562956 TNRC6CQ9HCJ0 1690 aaKnown RBP11.18□□□□□ -0.62
LINC00838-201ENST00000562956 CASZ1Q86V15 1759 aa11.17□□□□□ -0.62
LINC00838-201ENST00000562956 HMGB1P09429 215 aaKnown RBP11.17□□□□□ -0.62
LINC00838-201ENST00000562956 DHX32Q7L7V1 743 aaKnown RBP11.17□□□□□ -0.62
LINC00838-201ENST00000562956 FAM84BQ96KN1 310 aaPredicted RBP11.17□□□□□ -0.62
LINC00838-201ENST00000562956 UBR3Q6ZT12 1888 aa11.17□□□□□ -0.62
LINC00838-201ENST00000562956 GJB2P29033 226 aa11.17□□□□□ -0.62
LINC00838-201ENST00000562956 EXOSC10Q01780 885 aaKnown RBP11.17□□□□□ -0.62
LINC00838-201ENST00000562956 STK3Q13188 491 aa11.17□□□□□ -0.62
LINC00838-201ENST00000562956 IMMTQ16891 758 aaKnown RBP11.17□□□□□ -0.62
LINC00838-201ENST00000562956 COL1A1P02452 1464 aaPredicted RBP11.16□□□□□ -0.62
LINC00838-201ENST00000562956 CAVIN4Q5BKX8 364 aa11.16□□□□□ -0.62
LINC00838-201ENST00000562956 BRF1Q92994 677 aa11.16□□□□□ -0.62
LINC00838-201ENST00000562956 STRBPQ96SI9 672 aaKnown RBP11.16□□□□□ -0.62
LINC00838-201ENST00000562956 GZF1Q9H116 711 aaPredicted RBP11.16□□□□□ -0.62
LINC00838-201ENST00000562956 GOLGA6L22H0YM25 854 aa11.16□□□□□ -0.62
LINC00838-201ENST00000562956 SERPINB2P05120 415 aa11.16□□□□□ -0.62
LINC00838-201ENST00000562956 SYT1P21579 422 aa11.16□□□□□ -0.62
LINC00838-201ENST00000562956 CHST3Q7LGC8 479 aa11.16□□□□□ -0.62
LINC00838-201ENST00000562956 VPS37DQ86XT2 251 aa11.16□□□□□ -0.62
LINC00838-201ENST00000562956 AIDAQ96BJ3 306 aa11.16□□□□□ -0.62
LINC00838-201ENST00000562956 ANKRD2Q9GZV1 360 aa11.16□□□□□ -0.62
LINC00838-201ENST00000562956 GNL3LQ9NVN8 582 aaKnown RBP11.16□□□□□ -0.62
LINC00838-201ENST00000562956 LRP2BPQ9P2M1 347 aa11.16□□□□□ -0.62
LINC00838-201ENST00000562956 APBA3O96018 575 aa11.15□□□□□ -0.62
LINC00838-201ENST00000562956 ZNF827Q17R98 1081 aa11.15□□□□□ -0.62
LINC00838-201ENST00000562956 WDR33Q9C0J8 1336 aaKnown RBP11.15□□□□□ -0.62
LINC00838-201ENST00000562956 MBD4O95243 580 aa11.15□□□□□ -0.62
LINC00838-201ENST00000562956 APPP05067 770 aa11.15□□□□□ -0.62
LINC00838-201ENST00000562956 DDR1Q08345 913 aa11.15□□□□□ -0.62
LINC00838-201ENST00000562956 GRAPQ13588 217 aa11.15□□□□□ -0.62
LINC00838-201ENST00000562956 FBXO33Q7Z6M2 555 aa11.15□□□□□ -0.62
LINC00838-201ENST00000562956 GRAPLQ8TC17 118 aaPredicted RBP11.15□□□□□ -0.62
LINC00838-201ENST00000562956 NBPF3Q9H094 633 aa11.15□□□□□ -0.62
LINC00838-201ENST00000562956 TFCP2L1Q9NZI6 479 aa11.15□□□□□ -0.62
LINC00838-201ENST00000562956 A0A1B0GUL6 1792 aa11.15□□□□□ -0.62
LINC00838-201ENST00000562956 MYO5AQ9Y4I1 1855 aaKnown RBP11.15□□□□□ -0.62
LINC00838-201ENST00000562956 ZNF213O14771 459 aa11.15□□□□□ -0.63
LINC00838-201ENST00000562956 PLSCR1O15162 318 aa11.15□□□□□ -0.63
LINC00838-201ENST00000562956 STX6O43752 255 aa11.15□□□□□ -0.63
LINC00838-201ENST00000562956 RXRBP28702 533 aa11.15□□□□□ -0.63
LINC00838-201ENST00000562956 FGD1P98174 961 aa11.15□□□□□ -0.63
LINC00838-201ENST00000562956 ARMT1Q9H993 441 aa11.15□□□□□ -0.63
LINC00838-201ENST00000562956 ABCF2Q9UG63 623 aa11.15□□□□□ -0.63
LINC00838-201ENST00000562956 PTMSP20962 102 aa11.14□□□□□ -0.63
LINC00838-201ENST00000562956 FOXD4L6Q3SYB3 417 aaPredicted RBP11.14□□□□□ -0.63
LINC00838-201ENST00000562956 FOXD4L3Q6VB84 417 aaPredicted RBP11.14□□□□□ -0.63
LINC00838-201ENST00000562956 ADGRA1Q86SQ6 560 aa11.14□□□□□ -0.63
LINC00838-201ENST00000562956 AGXT2Q9BYV1 514 aa11.14□□□□□ -0.63
LINC00838-201ENST00000562956 LMBRD1Q9NUN5 540 aa11.14□□□□□ -0.63
LINC00838-201ENST00000562956 MYH7P12883 1935 aa11.14□□□□□ -0.63
LINC00838-201ENST00000562956 POLRMTO00411 1230 aaKnown RBP11.14□□□□□ -0.63
LINC00838-201ENST00000562956 ST5P78524 1137 aa11.14□□□□□ -0.63
LINC00838-201ENST00000562956 APOBRQ0VD83 1088 aa11.14□□□□□ -0.63
LINC00838-201ENST00000562956 CRY2Q49AN0 593 aa11.14□□□□□ -0.63
LINC00838-201ENST00000562956 GLIPR1L2Q4G1C9 344 aa11.14□□□□□ -0.63
LINC00838-201ENST00000562956 TXNRD3Q86VQ6 643 aa11.14□□□□□ -0.63
LINC00838-201ENST00000562956 GTF3C6Q969F1 213 aa11.14□□□□□ -0.63
LINC00838-201ENST00000562956 EPB41L4AQ9HCS5 686 aaPredicted RBP11.14□□□□□ -0.63
LINC00838-201ENST00000562956 ZSCAN22P10073 491 aaPredicted RBP11.13□□□□□ -0.63
LINC00838-201ENST00000562956 LCORLQ8N3X6 602 aa11.13□□□□□ -0.63
LINC00838-201ENST00000562956 MIGA1Q8NAN2 632 aa11.13□□□□□ -0.63
LINC00838-201ENST00000562956 RPGRQ92834 1020 aaKnown RBP11.13□□□□□ -0.63
LINC00838-201ENST00000562956 AKT1S1Q96B36 256 aa11.13□□□□□ -0.63
LINC00838-201ENST00000562956 DENND2AQ9ULE3 1009 aa11.13□□□□□ -0.63
LINC00838-201ENST00000562956 DOCK2Q92608 1830 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms