RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 LLPHQ9BRT6 129 aaKnown RBP11.61□□□□□ -0.55
SMG1-205ENST00000561947 FGAP02671 866 aa11.6□□□□□ -0.55
SMG1-205ENST00000561947 SLC9C2Q5TAH2 1124 aa11.6□□□□□ -0.55
SMG1-205ENST00000561947 IDH1O75874 414 aaKnown RBP11.6□□□□□ -0.55
SMG1-205ENST00000561947 APOBRQ0VD83 1088 aa11.6□□□□□ -0.55
SMG1-205ENST00000561947 FBXL16Q8N461 479 aa11.6□□□□□ -0.55
SMG1-205ENST00000561947 SMARCC2Q8TAQ2 1214 aa11.6□□□□□ -0.55
SMG1-205ENST00000561947 RBSNQ9H1K0 784 aa11.6□□□□□ -0.55
SMG1-205ENST00000561947 RGL2O15211 777 aa11.59□□□□□ -0.55
SMG1-205ENST00000561947 FAM43AQ8N2R8 423 aa11.59□□□□□ -0.55
SMG1-205ENST00000561947 SPATA5Q8NB90 893 aa11.59□□□□□ -0.55
SMG1-205ENST00000561947 COL4A1P02462 1669 aa11.59□□□□□ -0.55
SMG1-205ENST00000561947 PHF14O94880 888 aa11.59□□□□□ -0.55
SMG1-205ENST00000561947 PDE6AP16499 860 aa11.59□□□□□ -0.55
SMG1-205ENST00000561947 HAND2P61296 217 aa11.59□□□□□ -0.55
SMG1-205ENST00000561947 ZNF532Q9HCE3 1301 aa11.59□□□□□ -0.55
SMG1-205ENST00000561947 TCRBV5S4A2TA0A5A2 114 aa11.58□□□□□ -0.56
SMG1-205ENST00000561947 KRT85P78386 507 aa11.58□□□□□ -0.56
SMG1-205ENST00000561947 FERMT3Q86UX7 667 aa11.58□□□□□ -0.56
SMG1-205ENST00000561947 ZNF274Q96GC6 653 aaPredicted RBP11.58□□□□□ -0.56
SMG1-205ENST00000561947 WWC3Q9ULE0 1092 aa11.58□□□□□ -0.56
SMG1-205ENST00000561947 MYH15Q9Y2K3 1946 aa11.58□□□□□ -0.56
SMG1-205ENST00000561947 SNAP23O00161 211 aa11.58□□□□□ -0.56
SMG1-205ENST00000561947 ZNF213O14771 459 aa11.58□□□□□ -0.56
SMG1-205ENST00000561947 CCDC173Q0VFZ6 552 aa11.58□□□□□ -0.56
SMG1-205ENST00000561947 RASGRF1Q13972 1273 aa11.58□□□□□ -0.56
SMG1-205ENST00000561947 CCDC183Q5T5S1 534 aa11.58□□□□□ -0.56
SMG1-205ENST00000561947 CHST3Q7LGC8 479 aa11.58□□□□□ -0.56
SMG1-205ENST00000561947 MB21D2Q8IYB1 491 aaPredicted RBP11.58□□□□□ -0.56
SMG1-205ENST00000561947 NSUN7Q8NE18 718 aaKnown RBP11.58□□□□□ -0.56
SMG1-205ENST00000561947 CDC5LQ99459 802 aaKnown RBP11.58□□□□□ -0.56
SMG1-205ENST00000561947 USP21Q9UK80 565 aa11.58□□□□□ -0.56
SMG1-205ENST00000561947 COL24A1Q17RW2 1714 aa11.58□□□□□ -0.56
SMG1-205ENST00000561947 SPATA31A6Q5VVP1 1343 aa11.58□□□□□ -0.56
SMG1-205ENST00000561947 KCNQ4P56696 695 aa11.57□□□□□ -0.56
SMG1-205ENST00000561947 EVCP57679 992 aa11.57□□□□□ -0.56
SMG1-205ENST00000561947 CHRNDQ07001 517 aa11.57□□□□□ -0.56
SMG1-205ENST00000561947 ERFEQ4G0M1 354 aa11.57□□□□□ -0.56
SMG1-205ENST00000561947 RC3H1Q5TC82 1133 aaKnown RBP11.57□□□□□ -0.56
SMG1-205ENST00000561947 PTF1AQ7RTS3 328 aa11.57□□□□□ -0.56
SMG1-205ENST00000561947 NCOA7Q8NI08 942 aa11.57□□□□□ -0.56
SMG1-205ENST00000561947 ANP32BQ92688 251 aaKnown RBP11.57□□□□□ -0.56
SMG1-205ENST00000561947 DDX11Q96FC9 970 aa11.57□□□□□ -0.56
SMG1-205ENST00000561947 CTDNEP1O95476 244 aa11.57□□□□□ -0.56
SMG1-205ENST00000561947 PDIA3P30101 505 aaKnown RBP11.57□□□□□ -0.56
SMG1-205ENST00000561947 HMGN5P82970 282 aaKnown RBP11.57□□□□□ -0.56
SMG1-205ENST00000561947 SF3B3Q15393 1217 aaKnown RBP11.57□□□□□ -0.56
SMG1-205ENST00000561947 FAM184AQ8NB25 1140 aa11.57□□□□□ -0.56
SMG1-205ENST00000561947 CHMP4CQ96CF2 233 aa11.57□□□□□ -0.56
SMG1-205ENST00000561947 PPP1R9BQ96SB3 815 aa11.57□□□□□ -0.56
SMG1-205ENST00000561947 TAF1P21675 1872 aa11.57□□□□□ -0.56
SMG1-205ENST00000561947 ELP1O95163 1332 aa11.57□□□□□ -0.56
SMG1-205ENST00000561947 WDR19Q8NEZ3 1342 aa11.57□□□□□ -0.56
SMG1-205ENST00000561947 PTPDC1A2A3K4 754 aa11.56□□□□□ -0.56
SMG1-205ENST00000561947 PRC1O43663 620 aa11.56□□□□□ -0.56
SMG1-205ENST00000561947 MCM5P33992 734 aa11.56□□□□□ -0.56
SMG1-205ENST00000561947 MAP3K12Q12852 859 aa11.56□□□□□ -0.56
SMG1-205ENST00000561947 TSPY26PQ9H489 355 aa11.56□□□□□ -0.56
SMG1-205ENST00000561947 TAF1LQ8IZX4 1826 aa11.56□□□□□ -0.56
SMG1-205ENST00000561947 CHD4Q14839 1912 aa11.56□□□□□ -0.56
SMG1-205ENST00000561947 LY75O60449 1722 aa11.56□□□□□ -0.56
SMG1-205ENST00000561947 H3BQV1 296 aa11.56□□□□□ -0.56
SMG1-205ENST00000561947 CCT2P78371 535 aaKnown RBP11.56□□□□□ -0.56
SMG1-205ENST00000561947 RESTQ13127 1097 aa11.56□□□□□ -0.56
SMG1-205ENST00000561947 IFFO2Q5TF58 517 aa11.56□□□□□ -0.56
SMG1-205ENST00000561947 FAM173BQ6P4H8 233 aa11.56□□□□□ -0.56
SMG1-205ENST00000561947 C3orf67Q6ZVT6 689 aa11.56□□□□□ -0.56
SMG1-205ENST00000561947 RALYLQ86SE5 291 aaKnown RBP11.56□□□□□ -0.56
SMG1-205ENST00000561947 TTC6Q86TZ1 520 aa11.56□□□□□ -0.56
SMG1-205ENST00000561947 BCL2L12Q9HB09 334 aa11.56□□□□□ -0.56
SMG1-205ENST00000561947 KIF3AQ9Y496 699 aa11.56□□□□□ -0.56
SMG1-205ENST00000561947 SALL1Q9NSC2 1324 aa11.56□□□□□ -0.56
SMG1-205ENST00000561947 RPS6KA4O75676 772 aa11.55□□□□□ -0.56
SMG1-205ENST00000561947 BCAMP50895 628 aa11.55□□□□□ -0.56
SMG1-205ENST00000561947 ANKRD18AQ8IVF6 992 aa11.55□□□□□ -0.56
SMG1-205ENST00000561947 MAGEB6Q8N7X4 407 aa11.55□□□□□ -0.56
SMG1-205ENST00000561947 AIDAQ96BJ3 306 aa11.55□□□□□ -0.56
SMG1-205ENST00000561947 STRBPQ96SI9 672 aaKnown RBP11.55□□□□□ -0.56
SMG1-205ENST00000561947 NBPF3Q9H094 633 aa11.55□□□□□ -0.56
SMG1-205ENST00000561947 NARFQ9UHQ1 456 aa11.55□□□□□ -0.56
SMG1-205ENST00000561947 NAP1L2Q9ULW6 460 aaPredicted RBP11.55□□□□□ -0.56
SMG1-205ENST00000561947 SBF2Q86WG5 1849 aa11.55□□□□□ -0.56
SMG1-205ENST00000561947 LETM1O95202 739 aaPredicted RBP11.55□□□□□ -0.56
SMG1-205ENST00000561947 ANTXR2P58335 489 aa11.55□□□□□ -0.56
SMG1-205ENST00000561947 SLC10A5Q5PT55 438 aa11.55□□□□□ -0.56
SMG1-205ENST00000561947 TBC1D9BQ66K14 1250 aa11.55□□□□□ -0.56
SMG1-205ENST00000561947 NAA16Q6N069 864 aaPredicted RBP11.55□□□□□ -0.56
SMG1-205ENST00000561947 SCAND2PQ9GZW5 306 aaPredicted RBP11.55□□□□□ -0.56
SMG1-205ENST00000561947 ZSCAN16Q9H4T2 348 aaPredicted RBP11.55□□□□□ -0.56
SMG1-205ENST00000561947 NCOA5Q9HCD5 579 aaKnown RBP11.55□□□□□ -0.56
SMG1-205ENST00000561947 GPHNQ9NQX3 736 aaPredicted RBP11.55□□□□□ -0.56
SMG1-205ENST00000561947 ZMYM6O95789 1325 aa11.55□□□□□ -0.56
SMG1-205ENST00000561947 APPP05067 770 aa11.54□□□□□ -0.56
SMG1-205ENST00000561947 ALX1Q15699 326 aa11.54□□□□□ -0.56
SMG1-205ENST00000561947 TPRNQ4KMQ1 711 aa11.54□□□□□ -0.56
SMG1-205ENST00000561947 BICDL1Q6ZP65 573 aa11.54□□□□□ -0.56
SMG1-205ENST00000561947 TBC1D10CQ8IV04 446 aa11.54□□□□□ -0.56
SMG1-205ENST00000561947 NYXQ9GZU5 481 aa11.54□□□□□ -0.56
SMG1-205ENST00000561947 C4AP0C0L4 1744 aa11.54□□□□□ -0.56
SMG1-205ENST00000561947 C4BP0C0L5 1744 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms