RNA–Protein interactions for RNA: ENST00000561864.1

AC055717.2-201, humanhuman

TSL 4 BASIC

Gene AC055717.2, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055717.2-201ENST00000561864 BCL11BQ9C0K0 894 aaPredicted RBP14.99□□□□□ -0.01
AC055717.2-201ENST00000561864 COL4A1P02462 1669 aa14.99□□□□□ -0.01
AC055717.2-201ENST00000561864 FOXP2O15409 715 aa14.98□□□□□ -0.01
AC055717.2-201ENST00000561864 IDH1O75874 414 aaKnown RBP14.98□□□□□ -0.01
AC055717.2-201ENST00000561864 GTF2E1P29083 439 aaPredicted RBP14.98□□□□□ -0.01
AC055717.2-201ENST00000561864 MRE11P49959 708 aa14.98□□□□□ -0.01
AC055717.2-201ENST00000561864 FGD1P98174 961 aa14.98□□□□□ -0.01
AC055717.2-201ENST00000561864 MAP3K12Q12852 859 aa14.98□□□□□ -0.01
AC055717.2-201ENST00000561864 COL9A3Q14050 684 aaPredicted RBP14.98□□□□□ -0.01
AC055717.2-201ENST00000561864 KRT27Q7Z3Y8 459 aa14.98□□□□□ -0.01
AC055717.2-201ENST00000561864 TCEANC2Q96MN5 208 aa14.98□□□□□ -0.01
AC055717.2-201ENST00000561864 PUS7LQ9H0K6 701 aaKnown RBP14.98□□□□□ -0.01
AC055717.2-201ENST00000561864 BSDC1Q9NW68 430 aaPredicted RBP14.98□□□□□ -0.01
AC055717.2-201ENST00000561864 MTMR6Q9Y217 621 aa14.98□□□□□ -0.01
AC055717.2-201ENST00000561864 TIAM2Q8IVF5 1701 aa14.97□□□□□ -0.01
AC055717.2-201ENST00000561864 ZNF804BA4D1E1 1349 aa14.97□□□□□ -0.01
AC055717.2-201ENST00000561864 ZNF532Q9HCE3 1301 aa14.97□□□□□ -0.01
AC055717.2-201ENST00000561864 TCRBV5S4A2TA0A5A2 114 aa14.97□□□□□ -0.01
AC055717.2-201ENST00000561864 PFKFB2O60825 505 aa14.97□□□□□ -0.01
AC055717.2-201ENST00000561864 ADRA2BP18089 450 aa14.97□□□□□ -0.01
AC055717.2-201ENST00000561864 KCNQ4P56696 695 aa14.97□□□□□ -0.01
AC055717.2-201ENST00000561864 RASGRF1Q13972 1273 aa14.97□□□□□ -0.01
AC055717.2-201ENST00000561864 UBE4AQ14139 1066 aa14.97□□□□□ -0.01
AC055717.2-201ENST00000561864 CSPP1Q1MSJ5 1256 aa14.97□□□□□ -0.01
AC055717.2-201ENST00000561864 FAM182BQ5T319 152 aa14.97□□□□□ -0.01
AC055717.2-201ENST00000561864 NBPF5PQ86XG9 351 aaPredicted RBP14.97□□□□□ -0.01
AC055717.2-201ENST00000561864 SRP68Q9UHB9 627 aaKnown RBP14.97□□□□□ -0.01
AC055717.2-201ENST00000561864 HMGB2P26583 209 aaKnown RBP14.96□□□□□ -0.01
AC055717.2-201ENST00000561864 ZNF445P59923 1031 aa14.96□□□□□ -0.01
AC055717.2-201ENST00000561864 ALX1Q15699 326 aa14.96□□□□□ -0.01
AC055717.2-201ENST00000561864 C3orf67Q6ZVT6 689 aa14.96□□□□□ -0.01
AC055717.2-201ENST00000561864 BRF1Q92994 677 aa14.96□□□□□ -0.01
AC055717.2-201ENST00000561864 NLRP3Q96P20 1036 aa14.96□□□□□ -0.01
AC055717.2-201ENST00000561864 GNL3LQ9NVN8 582 aaKnown RBP14.96□□□□□ -0.01
AC055717.2-201ENST00000561864 TNRC6CQ9HCJ0 1690 aaKnown RBP14.96□□□□□ -0.01
AC055717.2-201ENST00000561864 CARMIL3Q8ND23 1372 aa14.96□□□□□ -0.02
AC055717.2-201ENST00000561864 MYO5AQ9Y4I1 1855 aaKnown RBP14.95□□□□□ -0.02
AC055717.2-201ENST00000561864 ZBTB22O15209 634 aa14.95□□□□□ -0.02
AC055717.2-201ENST00000561864 FGAP02671 866 aa14.95□□□□□ -0.02
AC055717.2-201ENST00000561864 NCLP19338 710 aaKnown RBP14.95□□□□□ -0.02
AC055717.2-201ENST00000561864 LARP1BQ659C4 914 aaKnown RBP14.95□□□□□ -0.02
AC055717.2-201ENST00000561864 TTLL5Q6EMB2 1281 aa14.95□□□□□ -0.02
AC055717.2-201ENST00000561864 TPTE2Q6XPS3 522 aa14.95□□□□□ -0.02
AC055717.2-201ENST00000561864 BICDL1Q6ZP65 573 aa14.95□□□□□ -0.02
AC055717.2-201ENST00000561864 GPT2Q8TD30 523 aa14.95□□□□□ -0.02
AC055717.2-201ENST00000561864 ARHGEF1Q92888 912 aaKnown RBP14.95□□□□□ -0.02
AC055717.2-201ENST00000561864 WWC3Q9ULE0 1092 aa14.95□□□□□ -0.02
AC055717.2-201ENST00000561864 UBR3Q6ZT12 1888 aa14.95□□□□□ -0.02
AC055717.2-201ENST00000561864 MAST2Q6P0Q8 1798 aa14.94□□□□□ -0.02
AC055717.2-201ENST00000561864 ZNF213O14771 459 aa14.94□□□□□ -0.02
AC055717.2-201ENST00000561864 SEMA3EO15041 775 aa14.94□□□□□ -0.02
AC055717.2-201ENST00000561864 GNAT2P19087 354 aa14.94□□□□□ -0.02
AC055717.2-201ENST00000561864 RFC4P35249 363 aa14.94□□□□□ -0.02
AC055717.2-201ENST00000561864 EVCP57679 992 aa14.94□□□□□ -0.02
AC055717.2-201ENST00000561864 TRAPPC3LQ5T215 181 aa14.94□□□□□ -0.02
AC055717.2-201ENST00000561864 RALYLQ86SE5 291 aaKnown RBP14.94□□□□□ -0.02
AC055717.2-201ENST00000561864 NCOA7Q8NI08 942 aa14.94□□□□□ -0.02
AC055717.2-201ENST00000561864 SMARCC2Q8TAQ2 1214 aa14.94□□□□□ -0.02
AC055717.2-201ENST00000561864 ZNF274Q96GC6 653 aaPredicted RBP14.94□□□□□ -0.02
AC055717.2-201ENST00000561864 ANKRD2Q9GZV1 360 aa14.94□□□□□ -0.02
AC055717.2-201ENST00000561864 KIF3AQ9Y496 699 aa14.94□□□□□ -0.02
AC055717.2-201ENST00000561864 PDS5AQ29RF7 1337 aaKnown RBP14.93□□□□□ -0.02
AC055717.2-201ENST00000561864 PNPLA7Q6ZV29 1317 aa14.93□□□□□ -0.02
AC055717.2-201ENST00000561864 VPS37CA5D8V6 355 aaPredicted RBP14.93□□□□□ -0.02
AC055717.2-201ENST00000561864 MCM5P33992 734 aa14.93□□□□□ -0.02
AC055717.2-201ENST00000561864 BCAMP50895 628 aa14.93□□□□□ -0.02
AC055717.2-201ENST00000561864 HMGN5P82970 282 aaKnown RBP14.93□□□□□ -0.02
AC055717.2-201ENST00000561864 STK3Q13188 491 aa14.93□□□□□ -0.02
AC055717.2-201ENST00000561864 SLC27A3Q5K4L6 730 aa14.93□□□□□ -0.02
AC055717.2-201ENST00000561864 CAVIN1Q6NZI2 390 aaKnown RBP14.93□□□□□ -0.02
AC055717.2-201ENST00000561864 MB21D2Q8IYB1 491 aaPredicted RBP14.93□□□□□ -0.02
AC055717.2-201ENST00000561864 MAGEB6Q8N7X4 407 aa14.93□□□□□ -0.02
AC055717.2-201ENST00000561864 SYAP1Q96A49 352 aaPredicted RBP14.93□□□□□ -0.02
AC055717.2-201ENST00000561864 AIDAQ96BJ3 306 aa14.93□□□□□ -0.02
AC055717.2-201ENST00000561864 STRBPQ96SI9 672 aaKnown RBP14.93□□□□□ -0.02
AC055717.2-201ENST00000561864 GRPEL1Q9HAV7 217 aa14.93□□□□□ -0.02
AC055717.2-201ENST00000561864 MINPP1Q9UNW1 487 aa14.93□□□□□ -0.02
AC055717.2-201ENST00000561864 A0A0G2JLW4 131 aa14.92□□□□□ -0.02
AC055717.2-201ENST00000561864 RPS8P62241 208 aaKnown RBP14.92□□□□□ -0.02
AC055717.2-201ENST00000561864 ZSCAN23Q3MJ62 389 aa14.92□□□□□ -0.02
AC055717.2-201ENST00000561864 CAVIN4Q5BKX8 364 aa14.92□□□□□ -0.02
AC055717.2-201ENST00000561864 FAM196AQ6ZSG2 479 aa14.92□□□□□ -0.02
AC055717.2-201ENST00000561864 CHAMP1Q96JM3 812 aa14.92□□□□□ -0.02
AC055717.2-201ENST00000561864 BRWD3Q6RI45 1802 aa14.92□□□□□ -0.02
AC055717.2-201ENST00000561864 SNAP23O00161 211 aa14.91□□□□□ -0.02
AC055717.2-201ENST00000561864 PRC1O43663 620 aa14.91□□□□□ -0.02
AC055717.2-201ENST00000561864 MBD4O95243 580 aa14.91□□□□□ -0.02
AC055717.2-201ENST00000561864 APOBRQ0VD83 1088 aa14.91□□□□□ -0.02
AC055717.2-201ENST00000561864 SCRN1Q12765 414 aa14.91□□□□□ -0.02
AC055717.2-201ENST00000561864 TRDNQ13061 729 aa14.91□□□□□ -0.02
AC055717.2-201ENST00000561864 TMED8Q6PL24 325 aaPredicted RBP14.91□□□□□ -0.02
AC055717.2-201ENST00000561864 USP48Q86UV5 1035 aa14.91□□□□□ -0.02
AC055717.2-201ENST00000561864 CELF1Q92879 486 aaKnown RBP14.91□□□□□ -0.02
AC055717.2-201ENST00000561864 LRRC2Q9BYS8 371 aa14.91□□□□□ -0.02
AC055717.2-201ENST00000561864 DENND2AQ9ULE3 1009 aa14.91□□□□□ -0.02
AC055717.2-201ENST00000561864 CNPY2Q9Y2B0 182 aa14.91□□□□□ -0.02
AC055717.2-201ENST00000561864 COL1A1P02452 1464 aaPredicted RBP14.9□□□□□ -0.02
AC055717.2-201ENST00000561864 PATL2C9JE40 543 aaKnown RBP14.9□□□□□ -0.02
AC055717.2-201ENST00000561864 PHF14O94880 888 aa14.9□□□□□ -0.02
AC055717.2-201ENST00000561864 XRCC6P12956 609 aaKnown RBP eCLIP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms