RNA–Protein interactions for RNA: ENST00000560987.5

SNRPA1-214, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-214ENST00000560987 SHTN1A0MZ66 631 aa11.18□□□□□ -0.62
SNRPA1-214ENST00000560987 SURF6O75683 361 aaKnown RBP11.18□□□□□ -0.62
SNRPA1-214ENST00000560987 BCAMP50895 628 aa11.18□□□□□ -0.62
SNRPA1-214ENST00000560987 PUM3Q15397 648 aaKnown RBP11.18□□□□□ -0.62
SNRPA1-214ENST00000560987 STRIP1Q5VSL9 837 aa11.18□□□□□ -0.62
SNRPA1-214ENST00000560987 C15orf52Q6ZUT6 534 aaKnown RBP11.18□□□□□ -0.62
SNRPA1-214ENST00000560987 ATG9AQ7Z3C6 839 aa11.18□□□□□ -0.62
SNRPA1-214ENST00000560987 CNTROBQ8N137 903 aa11.18□□□□□ -0.62
SNRPA1-214ENST00000560987 JMYQ8N9B5 988 aa11.18□□□□□ -0.62
SNRPA1-214ENST00000560987 AGBL3Q8NEM8 1001 aa11.18□□□□□ -0.62
SNRPA1-214ENST00000560987 NEUROD6Q96NK8 337 aa11.18□□□□□ -0.62
SNRPA1-214ENST00000560987 BCL11AQ9H165 835 aa11.18□□□□□ -0.62
SNRPA1-214ENST00000560987 IQSEC3Q9UPP2 1182 aaPredicted RBP11.18□□□□□ -0.62
SNRPA1-214ENST00000560987 JAG2Q9Y219 1238 aa11.18□□□□□ -0.62
SNRPA1-214ENST00000560987 SCN4AP35499 1836 aa11.17□□□□□ -0.62
SNRPA1-214ENST00000560987 USP17L8P0C7I0 530 aa11.17□□□□□ -0.62
SNRPA1-214ENST00000560987 TIMM10P62072 90 aa11.17□□□□□ -0.62
SNRPA1-214ENST00000560987 TFCP2Q12800 502 aa11.17□□□□□ -0.62
SNRPA1-214ENST00000560987 CHAF1AQ13111 956 aaPredicted RBP11.17□□□□□ -0.62
SNRPA1-214ENST00000560987 MTX1Q13505 466 aa11.17□□□□□ -0.62
SNRPA1-214ENST00000560987 ATP2B3Q16720 1220 aa11.17□□□□□ -0.62
SNRPA1-214ENST00000560987 GORABQ5T7V8 394 aa11.17□□□□□ -0.62
SNRPA1-214ENST00000560987 C20orf194Q5TEA3 1177 aa11.17□□□□□ -0.62
SNRPA1-214ENST00000560987 MAP1SQ66K74 1059 aaPredicted RBP11.17□□□□□ -0.62
SNRPA1-214ENST00000560987 LPIN2Q92539 896 aa11.17□□□□□ -0.62
SNRPA1-214ENST00000560987 HDAC9Q9UKV0 1011 aa11.17□□□□□ -0.62
SNRPA1-214ENST00000560987 AKAP2Q9Y2D5 859 aa11.17□□□□□ -0.62
SNRPA1-214ENST00000560987 F8W031 263 aaPredicted RBP11.16□□□□□ -0.62
SNRPA1-214ENST00000560987 SASH1O94885 1247 aa11.16□□□□□ -0.62
SNRPA1-214ENST00000560987 IL1R1P14778 569 aa11.16□□□□□ -0.62
SNRPA1-214ENST00000560987 DACT2Q5SW24 774 aa11.16□□□□□ -0.62
SNRPA1-214ENST00000560987 FBXO33Q7Z6M2 555 aa11.16□□□□□ -0.62
SNRPA1-214ENST00000560987 KIAA0825Q8IV33 1275 aa11.16□□□□□ -0.62
SNRPA1-214ENST00000560987 CREBZFQ9NS37 354 aa11.16□□□□□ -0.62
SNRPA1-214ENST00000560987 GNL3LQ9NVN8 582 aaKnown RBP11.16□□□□□ -0.62
SNRPA1-214ENST00000560987 LTBP1Q14766 1721 aa11.15□□□□□ -0.62
SNRPA1-214ENST00000560987 MYO3BQ8WXR4 1341 aa11.15□□□□□ -0.62
SNRPA1-214ENST00000560987 FGFR2P21802 821 aa11.15□□□□□ -0.62
SNRPA1-214ENST00000560987 RBM5P52756 815 aaKnown RBP eCLIP11.15□□□□□ -0.62
SNRPA1-214ENST00000560987 KIF4BQ2VIQ3 1234 aa11.15□□□□□ -0.62
SNRPA1-214ENST00000560987 VGLL2Q8N8G2 317 aa11.15□□□□□ -0.62
SNRPA1-214ENST00000560987 TDRD7Q8NHU6 1098 aaKnown RBP11.15□□□□□ -0.62
SNRPA1-214ENST00000560987 TRPM4Q8TD43 1214 aa11.15□□□□□ -0.62
SNRPA1-214ENST00000560987 SSH3Q8TE77 659 aa11.15□□□□□ -0.62
SNRPA1-214ENST00000560987 DCPSQ96C86 337 aaKnown RBP11.15□□□□□ -0.62
SNRPA1-214ENST00000560987 MYOZ2Q9NPC6 264 aa11.15□□□□□ -0.62
SNRPA1-214ENST00000560987 HMMRO75330 724 aa11.14□□□□□ -0.63
SNRPA1-214ENST00000560987 HIRAP54198 1017 aaPredicted RBP11.14□□□□□ -0.63
SNRPA1-214ENST00000560987 SCARF1Q14162 830 aa11.14□□□□□ -0.63
SNRPA1-214ENST00000560987 CEP85Q6P2H3 762 aa11.14□□□□□ -0.63
SNRPA1-214ENST00000560987 RPAP2Q8IXW5 612 aaPredicted RBP11.14□□□□□ -0.63
SNRPA1-214ENST00000560987 ZBTB40Q9NUA8 1239 aa11.14□□□□□ -0.63
SNRPA1-214ENST00000560987 IRS2Q9Y4H2 1338 aa11.13□□□□□ -0.63
SNRPA1-214ENST00000560987 A0A1B0GUL7 405 aa11.13□□□□□ -0.63
SNRPA1-214ENST00000560987 TMEM88BA6NKF7 163 aa11.13□□□□□ -0.63
SNRPA1-214ENST00000560987 APBB1O00213 710 aa11.13□□□□□ -0.63
SNRPA1-214ENST00000560987 RRP1P56182 461 aaKnown RBP11.13□□□□□ -0.63
SNRPA1-214ENST00000560987 DLGAP5Q15398 846 aa11.13□□□□□ -0.63
SNRPA1-214ENST00000560987 MFSD14BQ5SR56 506 aa11.13□□□□□ -0.63
SNRPA1-214ENST00000560987 CDC37L1Q7L3B6 337 aa11.13□□□□□ -0.63
SNRPA1-214ENST00000560987 USP48Q86UV5 1035 aa11.13□□□□□ -0.63
SNRPA1-214ENST00000560987 ZC3H15Q8WU90 426 aaKnown RBP11.13□□□□□ -0.63
SNRPA1-214ENST00000560987 XAGE2Q96GT9 111 aa11.13□□□□□ -0.63
SNRPA1-214ENST00000560987 GMLQ99445 158 aa11.13□□□□□ -0.63
SNRPA1-214ENST00000560987 SCN9AQ15858 1988 aa11.13□□□□□ -0.63
SNRPA1-214ENST00000560987 ITGBL1O95965 494 aaPredicted RBP11.12□□□□□ -0.63
SNRPA1-214ENST00000560987 EGFRP00533 1210 aa11.12□□□□□ -0.63
SNRPA1-214ENST00000560987 ADORA1P30542 326 aa11.12□□□□□ -0.63
SNRPA1-214ENST00000560987 MMP14P50281 582 aa11.12□□□□□ -0.63
SNRPA1-214ENST00000560987 ZNF280AP59817 542 aaPredicted RBP11.12□□□□□ -0.63
SNRPA1-214ENST00000560987 HSP90AB4PQ58FF6 505 aa11.12□□□□□ -0.63
SNRPA1-214ENST00000560987 TBC1D22AQ8WUA7 517 aa11.12□□□□□ -0.63
SNRPA1-214ENST00000560987 GLIS2Q9BZE0 524 aaPredicted RBP11.12□□□□□ -0.63
SNRPA1-214ENST00000560987 ZNF408Q9H9D4 720 aa11.12□□□□□ -0.63
SNRPA1-214ENST00000560987 MKRN1Q9UHC7 482 aaKnown RBP11.12□□□□□ -0.63
SNRPA1-214ENST00000560987 EXOC6BQ9Y2D4 811 aa11.12□□□□□ -0.63
SNRPA1-214ENST00000560987 FAM205AQ6ZU69 1335 aa11.11□□□□□ -0.63
SNRPA1-214ENST00000560987 TRAF5O00463 557 aa11.11□□□□□ -0.63
SNRPA1-214ENST00000560987 PHKA1P46020 1223 aa11.11□□□□□ -0.63
SNRPA1-214ENST00000560987 FKBP1AP62942 108 aaKnown RBP11.11□□□□□ -0.63
SNRPA1-214ENST00000560987 NBPF9Q3BBW0 867 aa11.11□□□□□ -0.63
SNRPA1-214ENST00000560987 CCDC158Q5M9N0 1113 aa11.11□□□□□ -0.63
SNRPA1-214ENST00000560987 CCDC102BQ68D86 513 aa11.11□□□□□ -0.63
SNRPA1-214ENST00000560987 KRT26Q7Z3Y9 468 aa11.11□□□□□ -0.63
SNRPA1-214ENST00000560987 ERC1Q8IUD2 1116 aa11.11□□□□□ -0.63
SNRPA1-214ENST00000560987 SULF1Q8IWU6 871 aa11.11□□□□□ -0.63
SNRPA1-214ENST00000560987 CERS5Q8N5B7 392 aa11.11□□□□□ -0.63
SNRPA1-214ENST00000560987 WDR66Q8TBY9 1149 aa11.11□□□□□ -0.63
SNRPA1-214ENST00000560987 PGAP2Q9UHJ9 254 aa11.11□□□□□ -0.63
SNRPA1-214ENST00000560987 DENND2AQ9ULE3 1009 aa11.11□□□□□ -0.63
SNRPA1-214ENST00000560987 TTF2Q9UNY4 1162 aaKnown RBP11.11□□□□□ -0.63
SNRPA1-214ENST00000560987 NOP58Q9Y2X3 529 aaKnown RBP11.11□□□□□ -0.63
SNRPA1-214ENST00000560987 SUPT16HQ9Y5B9 1047 aaKnown RBP11.11□□□□□ -0.63
SNRPA1-214ENST00000560987 MYO1BO43795 1136 aa11.1□□□□□ -0.63
SNRPA1-214ENST00000560987 HSPA1AP0DMV8 641 aaKnown RBP11.1□□□□□ -0.63
SNRPA1-214ENST00000560987 HSPA1BP0DMV9 641 aaKnown RBP11.1□□□□□ -0.63
SNRPA1-214ENST00000560987 FMR1Q06787 632 aaKnown RBP eCLIP11.1□□□□□ -0.63
SNRPA1-214ENST00000560987 DEFB115Q30KQ5 88 aa11.1□□□□□ -0.63
SNRPA1-214ENST00000560987 CFAP100Q494V2 611 aa11.1□□□□□ -0.63
SNRPA1-214ENST00000560987 TNNI3KQ59H18 835 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms