RNA–Protein interactions for RNA: ENST00000560674.5

SYNM-203, Transcript of synemin, humanhuman

TSL 1 (best) BASIC

Gene SYNM, Length 5,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-203ENST00000560674 OGFRQ9NZT2 677 aa14.31□□□□□ -0.12
SYNM-203ENST00000560674 PLEKHM2Q8IWE5 1019 aa14.31□□□□□ -0.12
SYNM-203ENST00000560674 IQSEC3Q9UPP2 1182 aaPredicted RBP14.31□□□□□ -0.12
SYNM-203ENST00000560674 MAGEB6P1A0A0J9YX57 407 aa14.3□□□□□ -0.12
SYNM-203ENST00000560674 ATL3Q6DD88 541 aa14.3□□□□□ -0.12
SYNM-203ENST00000560674 CNGA4Q8IV77 575 aa14.3□□□□□ -0.12
SYNM-203ENST00000560674 SMC6Q96SB8 1091 aa14.3□□□□□ -0.12
SYNM-203ENST00000560674 LUC7L2Q9Y383 392 aaKnown RBP14.3□□□□□ -0.12
SYNM-203ENST00000560674 SBNO2Q9Y2G9 1366 aa14.3□□□□□ -0.12
SYNM-203ENST00000560674 TMEM110-MUSTN1A8MSY1 372 aa14.3□□□□□ -0.12
SYNM-203ENST00000560674 AKAP4Q5JQC9 854 aa14.3□□□□□ -0.12
SYNM-203ENST00000560674 CHMLP26374 656 aa14.3□□□□□ -0.12
SYNM-203ENST00000560674 CHST3Q7LGC8 479 aa14.3□□□□□ -0.12
SYNM-203ENST00000560674 LRRC45Q96CN5 670 aa14.3□□□□□ -0.12
SYNM-203ENST00000560674 USP26Q9BXU7 913 aa14.3□□□□□ -0.12
SYNM-203ENST00000560674 TNNQ9UQP3 1299 aa14.3□□□□□ -0.12
SYNM-203ENST00000560674 ZBTB16Q05516 673 aa14.3□□□□□ -0.12
SYNM-203ENST00000560674 PSMD1Q99460 953 aa14.3□□□□□ -0.12
SYNM-203ENST00000560674 LINS1Q8NG48 757 aa14.3□□□□□ -0.12
SYNM-203ENST00000560674 SMARCC2Q8TAQ2 1214 aa14.3□□□□□ -0.12
SYNM-203ENST00000560674 IFT81Q8WYA0 676 aa14.3□□□□□ -0.12
SYNM-203ENST00000560674 GJC1P36383 396 aa14.29□□□□□ -0.12
SYNM-203ENST00000560674 TNNC1P63316 161 aa14.29□□□□□ -0.12
SYNM-203ENST00000560674 ST5P78524 1137 aa14.29□□□□□ -0.12
SYNM-203ENST00000560674 MYL5Q02045 173 aa14.29□□□□□ -0.12
SYNM-203ENST00000560674 HDXQ7Z353 690 aa14.29□□□□□ -0.12
SYNM-203ENST00000560674 CPLX4Q7Z7G2 160 aa14.29□□□□□ -0.12
SYNM-203ENST00000560674 UTP14AQ9BVJ6 771 aaKnown RBP14.29□□□□□ -0.12
SYNM-203ENST00000560674 TSGA10Q9BZW7 698 aa14.29□□□□□ -0.12
SYNM-203ENST00000560674 ZBTB40Q9NUA8 1239 aa14.29□□□□□ -0.12
SYNM-203ENST00000560674 ZEB2O60315 1214 aa14.29□□□□□ -0.12
SYNM-203ENST00000560674 RLBP1P12271 317 aa14.29□□□□□ -0.12
SYNM-203ENST00000560674 EEF2P13639 858 aaKnown RBP14.29□□□□□ -0.12
SYNM-203ENST00000560674 RFC4P35249 363 aa14.29□□□□□ -0.12
SYNM-203ENST00000560674 IMPG2Q9BZV3 1241 aa14.29□□□□□ -0.12
SYNM-203ENST00000560674 RRP36Q96EU6 259 aaKnown RBP14.29□□□□□ -0.12
SYNM-203ENST00000560674 TTC31Q49AM3 519 aaPredicted RBP14.29□□□□□ -0.12
SYNM-203ENST00000560674 IQUBQ8NA54 791 aa14.29□□□□□ -0.12
SYNM-203ENST00000560674 BAG1Q99933 345 aaPredicted RBP14.29□□□□□ -0.12
SYNM-203ENST00000560674 MCM7P33993 719 aa14.28□□□□□ -0.12
SYNM-203ENST00000560674 FAM76AQ8TAV0 307 aa14.28□□□□□ -0.12
SYNM-203ENST00000560674 MTRF1LQ9UGC7 380 aaKnown RBP14.28□□□□□ -0.12
SYNM-203ENST00000560674 ELP1O95163 1332 aa14.28□□□□□ -0.12
SYNM-203ENST00000560674 VAMP4O75379 141 aa14.28□□□□□ -0.12
SYNM-203ENST00000560674 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.28□□□□□ -0.12
SYNM-203ENST00000560674 CCDC50Q8IVM0 306 aa14.28□□□□□ -0.12
SYNM-203ENST00000560674 SSX2IPQ9Y2D8 614 aa14.28□□□□□ -0.12
SYNM-203ENST00000560674 SLC39A6Q13433 755 aa14.28□□□□□ -0.12
SYNM-203ENST00000560674 CEP57Q86XR8 500 aa14.28□□□□□ -0.12
SYNM-203ENST00000560674 AKR1B15C9JRZ8 316 aaPredicted RBP14.28□□□□□ -0.12
SYNM-203ENST00000560674 FAM13AO94988 1023 aa14.28□□□□□ -0.12
SYNM-203ENST00000560674 DNAJC21Q5F1R6 531 aaKnown RBP14.28□□□□□ -0.12
SYNM-203ENST00000560674 CCDC63Q8NA47 563 aa14.28□□□□□ -0.12
SYNM-203ENST00000560674 SOS1Q07889 1333 aaPredicted RBP14.28□□□□□ -0.12
SYNM-203ENST00000560674 NUP160Q12769 1436 aa14.27□□□□□ -0.12
SYNM-203ENST00000560674 PPIP5K1Q6PFW1 1433 aa14.27□□□□□ -0.12
SYNM-203ENST00000560674 MYCNP04198 464 aaPredicted RBP14.27□□□□□ -0.12
SYNM-203ENST00000560674 FAM160A1Q05DH4 1040 aa14.27□□□□□ -0.12
SYNM-203ENST00000560674 EIF4A2Q14240 407 aaKnown RBP14.27□□□□□ -0.12
SYNM-203ENST00000560674 CHRNA2Q15822 529 aa14.27□□□□□ -0.12
SYNM-203ENST00000560674 DTHD1Q6ZMT9 781 aa14.27□□□□□ -0.12
SYNM-203ENST00000560674 ERO1AQ96HE7 468 aa14.27□□□□□ -0.12
SYNM-203ENST00000560674 PPP1R9BQ96SB3 815 aa14.27□□□□□ -0.12
SYNM-203ENST00000560674 PLCB3Q01970 1234 aa14.27□□□□□ -0.12
SYNM-203ENST00000560674 CFAP58Q5T655 872 aa14.27□□□□□ -0.12
SYNM-203ENST00000560674 HS2ST1Q7LGA3 356 aa14.27□□□□□ -0.12
SYNM-203ENST00000560674 SMIM23A6NLE4 172 aa14.27□□□□□ -0.13
SYNM-203ENST00000560674 ZCRB1Q8TBF4 217 aaKnown RBP14.27□□□□□ -0.13
SYNM-203ENST00000560674 CCDC114Q96M63 670 aa14.27□□□□□ -0.13
SYNM-203ENST00000560674 CCDC122Q5T0U0 273 aa14.27□□□□□ -0.13
SYNM-203ENST00000560674 SAMD15Q9P1V8 674 aa14.27□□□□□ -0.13
SYNM-203ENST00000560674 EVCP57679 992 aa14.26□□□□□ -0.13
SYNM-203ENST00000560674 TNNI2P48788 182 aa14.26□□□□□ -0.13
SYNM-203ENST00000560674 PPP2R3AQ06190 1150 aa14.26□□□□□ -0.13
SYNM-203ENST00000560674 ATP6V0A2Q9Y487 856 aa14.26□□□□□ -0.13
SYNM-203ENST00000560674 TLDC2A0PJX2 215 aa14.26□□□□□ -0.13
SYNM-203ENST00000560674 SPDYE3A6NKU9 549 aa14.26□□□□□ -0.13
SYNM-203ENST00000560674 GNA11P29992 359 aa14.26□□□□□ -0.13
SYNM-203ENST00000560674 ZNF622Q969S3 477 aaKnown RBP eCLIP14.26□□□□□ -0.13
SYNM-203ENST00000560674 PPM1FP49593 454 aaPredicted RBP14.26□□□□□ -0.13
SYNM-203ENST00000560674 TFCP2Q12800 502 aa14.26□□□□□ -0.13
SYNM-203ENST00000560674 PICALMQ13492 652 aa14.26□□□□□ -0.13
SYNM-203ENST00000560674 TSPYL6Q8N831 410 aa14.26□□□□□ -0.13
SYNM-203ENST00000560674 A0A1B0GVL5 298 aa14.26□□□□□ -0.13
SYNM-203ENST00000560674 SEC24BO95487 1268 aa14.26□□□□□ -0.13
SYNM-203ENST00000560674 MTHFSDQ2M296 383 aaKnown RBP14.26□□□□□ -0.13
SYNM-203ENST00000560674 MAGEB6Q8N7X4 407 aa14.25□□□□□ -0.13
SYNM-203ENST00000560674 NGLY1Q96IV0 654 aa14.25□□□□□ -0.13
SYNM-203ENST00000560674 NLRP3Q96P20 1036 aa14.25□□□□□ -0.13
SYNM-203ENST00000560674 UGGT2Q9NYU1 1516 aa14.25□□□□□ -0.13
SYNM-203ENST00000560674 PPP1R7Q15435 360 aa14.25□□□□□ -0.13
SYNM-203ENST00000560674 ZNF804AQ7Z570 1209 aa14.25□□□□□ -0.13
SYNM-203ENST00000560674 DAAM2Q86T65 1068 aa14.25□□□□□ -0.13
SYNM-203ENST00000560674 GTF3C6Q969F1 213 aa14.25□□□□□ -0.13
SYNM-203ENST00000560674 PUS7Q96PZ0 661 aaKnown RBP14.25□□□□□ -0.13
SYNM-203ENST00000560674 RBSNQ9H1K0 784 aa14.25□□□□□ -0.13
SYNM-203ENST00000560674 RBM28Q9NW13 759 aaKnown RBP14.25□□□□□ -0.13
SYNM-203ENST00000560674 CCDC160A6NGH7 325 aa14.25□□□□□ -0.13
SYNM-203ENST00000560674 SETDB2Q96T68 719 aa14.25□□□□□ -0.13
SYNM-203ENST00000560674 MTUS1Q9ULD2 1270 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms