RNA–Protein interactions for RNA: ENST00000559551.5

RABGGTA-209, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-209ENST00000559551 PRPF40BQ6NWY9 871 aaKnown RBP17.24■□□□□ 0.35
RABGGTA-209ENST00000559551 CCDC171Q6TFL3 1326 aa17.24■□□□□ 0.35
RABGGTA-209ENST00000559551 TICAM2Q86XR7 235 aa17.24■□□□□ 0.35
RABGGTA-209ENST00000559551 MTFR1LQ9H019 292 aa17.24■□□□□ 0.35
RABGGTA-209ENST00000559551 TCRBV5S4A2TA0A5A2 114 aa17.23■□□□□ 0.35
RABGGTA-209ENST00000559551 ATP2B4P23634 1241 aa17.23■□□□□ 0.35
RABGGTA-209ENST00000559551 ADD2P35612 726 aa17.23■□□□□ 0.35
RABGGTA-209ENST00000559551 MCMDC2Q4G0Z9 681 aa17.23■□□□□ 0.35
RABGGTA-209ENST00000559551 C7orf43Q8WVR3 580 aa17.23■□□□□ 0.35
RABGGTA-209ENST00000559551 GGA1Q9UJY5 639 aa17.23■□□□□ 0.35
RABGGTA-209ENST00000559551 EIF5BO60841 1220 aaKnown RBP17.22■□□□□ 0.35
RABGGTA-209ENST00000559551 HSPA4P34932 840 aa17.22■□□□□ 0.35
RABGGTA-209ENST00000559551 NBR1Q14596 966 aa17.22■□□□□ 0.35
RABGGTA-209ENST00000559551 PUS7LQ9H0K6 701 aaKnown RBP17.22■□□□□ 0.35
RABGGTA-209ENST00000559551 HELLSQ9NRZ9 838 aa17.22■□□□□ 0.35
RABGGTA-209ENST00000559551 ZNF646O15015 1829 aaPredicted RBP17.22■□□□□ 0.35
RABGGTA-209ENST00000559551 ZBTB22O15209 634 aa17.22■□□□□ 0.35
RABGGTA-209ENST00000559551 FOXP2O15409 715 aa17.22■□□□□ 0.35
RABGGTA-209ENST00000559551 EPB41L2O43491 1005 aaKnown RBP17.22■□□□□ 0.35
RABGGTA-209ENST00000559551 IDH1O75874 414 aaKnown RBP17.22■□□□□ 0.35
RABGGTA-209ENST00000559551 TTF1Q15361 905 aaPredicted RBP17.22■□□□□ 0.35
RABGGTA-209ENST00000559551 VPS53Q5VIR6 699 aa17.22■□□□□ 0.35
RABGGTA-209ENST00000559551 ZNF384Q8TF68 577 aa17.22■□□□□ 0.35
RABGGTA-209ENST00000559551 MAP4K1Q92918 833 aa17.22■□□□□ 0.35
RABGGTA-209ENST00000559551 PDE6AP16499 860 aa17.21■□□□□ 0.35
RABGGTA-209ENST00000559551 VPS37DQ86XT2 251 aa17.21■□□□□ 0.35
RABGGTA-209ENST00000559551 RASEFQ8IZ41 740 aa17.21■□□□□ 0.35
RABGGTA-209ENST00000559551 TDRD7Q8NHU6 1098 aaKnown RBP17.21■□□□□ 0.35
RABGGTA-209ENST00000559551 IL17RAQ96F46 866 aa17.21■□□□□ 0.35
RABGGTA-209ENST00000559551 GNL3LQ9NVN8 582 aaKnown RBP17.21■□□□□ 0.35
RABGGTA-209ENST00000559551 DPEP1P16444 411 aa17.2■□□□□ 0.34
RABGGTA-209ENST00000559551 SLC9C2Q5TAH2 1124 aa17.2■□□□□ 0.34
RABGGTA-209ENST00000559551 DENND2AQ9ULE3 1009 aa17.2■□□□□ 0.34
RABGGTA-209ENST00000559551 JAG2Q9Y219 1238 aa17.2■□□□□ 0.34
RABGGTA-209ENST00000559551 MAST2Q6P0Q8 1798 aa17.2■□□□□ 0.34
RABGGTA-209ENST00000559551 SCN9AQ15858 1988 aa17.2■□□□□ 0.34
RABGGTA-209ENST00000559551 ZNF532Q9HCE3 1301 aa17.2■□□□□ 0.34
RABGGTA-209ENST00000559551 A0A0G2JLW4 131 aa17.2■□□□□ 0.34
RABGGTA-209ENST00000559551 SEMA3EO15041 775 aa17.2■□□□□ 0.34
RABGGTA-209ENST00000559551 CD2BP2O95400 341 aaKnown RBP17.2■□□□□ 0.34
RABGGTA-209ENST00000559551 ZFYP08048 801 aaPredicted RBP17.2■□□□□ 0.34
RABGGTA-209ENST00000559551 NECTIN1Q15223 517 aa17.2■□□□□ 0.34
RABGGTA-209ENST00000559551 MPNDQ8N594 471 aa17.2■□□□□ 0.34
RABGGTA-209ENST00000559551 APPBP2Q92624 585 aa17.2■□□□□ 0.34
RABGGTA-209ENST00000559551 LAMA4Q16363 1823 aa17.2■□□□□ 0.34
RABGGTA-209ENST00000559551 PDS5AQ29RF7 1337 aaKnown RBP17.19■□□□□ 0.34
RABGGTA-209ENST00000559551 PTGER2P43116 358 aa17.19■□□□□ 0.34
RABGGTA-209ENST00000559551 SLC4A3P48751 1232 aa17.19■□□□□ 0.34
RABGGTA-209ENST00000559551 UBE3CQ15386 1083 aa17.19■□□□□ 0.34
RABGGTA-209ENST00000559551 ZNF219Q9P2Y4 722 aaPredicted RBP17.19■□□□□ 0.34
RABGGTA-209ENST00000559551 RBM8AQ9Y5S9 174 aaKnown RBP17.19■□□□□ 0.34
RABGGTA-209ENST00000559551 TAF6LQ9Y6J9 622 aa17.19■□□□□ 0.34
RABGGTA-209ENST00000559551 C6orf229H3BNL8 230 aa17.19■□□□□ 0.34
RABGGTA-209ENST00000559551 KIAA1211Q6ZU35 1233 aa17.19■□□□□ 0.34
RABGGTA-209ENST00000559551 ADGRA1Q86SQ6 560 aa17.19■□□□□ 0.34
RABGGTA-209ENST00000559551 KCNB2Q92953 911 aa17.19■□□□□ 0.34
RABGGTA-209ENST00000559551 CNKSR1Q969H4 720 aa17.19■□□□□ 0.34
RABGGTA-209ENST00000559551 CD209Q9NNX6 404 aa17.19■□□□□ 0.34
RABGGTA-209ENST00000559551 COL9A3Q14050 684 aaPredicted RBP17.18■□□□□ 0.34
RABGGTA-209ENST00000559551 WASHC4Q2M389 1173 aa17.18■□□□□ 0.34
RABGGTA-209ENST00000559551 MAGEB6Q8N7X4 407 aa17.18■□□□□ 0.34
RABGGTA-209ENST00000559551 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.18■□□□□ 0.345e-6■■■■■ 34.6
RABGGTA-209ENST00000559551 SNX14Q9Y5W7 946 aa17.18■□□□□ 0.34
RABGGTA-209ENST00000559551 IL1R1P14778 569 aa17.17■□□□□ 0.34
RABGGTA-209ENST00000559551 CHAF1AQ13111 956 aaPredicted RBP17.17■□□□□ 0.34
RABGGTA-209ENST00000559551 GRIK5Q16478 980 aa17.17■□□□□ 0.34
RABGGTA-209ENST00000559551 TBC1D2Q9BYX2 928 aa17.17■□□□□ 0.34
RABGGTA-209ENST00000559551 ABCF2Q9UG63 623 aa17.17■□□□□ 0.34
RABGGTA-209ENST00000559551 MYH2Q9UKX2 1941 aa17.17■□□□□ 0.34
RABGGTA-209ENST00000559551 RIMBP2O15034 1052 aa17.17■□□□□ 0.34
RABGGTA-209ENST00000559551 DPP8Q6V1X1 898 aaPredicted RBP17.17■□□□□ 0.34
RABGGTA-209ENST00000559551 ZNF804AQ7Z570 1209 aa17.17■□□□□ 0.34
RABGGTA-209ENST00000559551 HSPD1P10809 573 aaKnown RBP17.16■□□□□ 0.34
RABGGTA-209ENST00000559551 PRDX5P30044 214 aa17.16■□□□□ 0.34
RABGGTA-209ENST00000559551 MAP3K12Q12852 859 aa17.16■□□□□ 0.34
RABGGTA-209ENST00000559551 GPAA1O43292 621 aa17.16■□□□□ 0.34
RABGGTA-209ENST00000559551 CREB3L3Q68CJ9 461 aa17.16■□□□□ 0.34
RABGGTA-209ENST00000559551 ZSCAN25Q6NSZ9 544 aa17.16■□□□□ 0.34
RABGGTA-209ENST00000559551 LRP2BPQ9P2M1 347 aa17.16■□□□□ 0.34
RABGGTA-209ENST00000559551 SLC27A2O14975 620 aa17.15■□□□□ 0.34
RABGGTA-209ENST00000559551 FRAT2O75474 233 aaPredicted RBP17.15■□□□□ 0.34
RABGGTA-209ENST00000559551 ANAPC15P60006 121 aa17.15■□□□□ 0.34
RABGGTA-209ENST00000559551 LRRFIP1Q32MZ4 808 aaKnown RBP17.15■□□□□ 0.34
RABGGTA-209ENST00000559551 DDRGK1Q96HY6 314 aa17.15■□□□□ 0.34
RABGGTA-209ENST00000559551 RTFDC1Q9BY42 306 aaPredicted RBP17.15■□□□□ 0.34
RABGGTA-209ENST00000559551 FER1L6Q2WGJ9 1857 aa17.14■□□□□ 0.33
RABGGTA-209ENST00000559551 CDK5RAP2Q96SN8 1893 aa17.14■□□□□ 0.33
RABGGTA-209ENST00000559551 C21orf2O43822 256 aa17.14■□□□□ 0.33
RABGGTA-209ENST00000559551 POLD1P28340 1107 aa17.14■□□□□ 0.33
RABGGTA-209ENST00000559551 ADCK5Q3MIX3 580 aa17.14■□□□□ 0.33
RABGGTA-209ENST00000559551 TTLL6Q8N841 843 aa17.14■□□□□ 0.33
RABGGTA-209ENST00000559551 NSUN4Q96CB9 384 aaKnown RBP17.14■□□□□ 0.33
RABGGTA-209ENST00000559551 BAZ2AQ9UIF9 1905 aaKnown RBP17.14■□□□□ 0.33
RABGGTA-209ENST00000559551 SALL1Q9NSC2 1324 aa17.14■□□□□ 0.33
RABGGTA-209ENST00000559551 MCCP23508 829 aa17.14■□□□□ 0.33
RABGGTA-209ENST00000559551 RABEP1Q15276 862 aa17.14■□□□□ 0.33
RABGGTA-209ENST00000559551 DSCC1Q9BVC3 393 aa17.14■□□□□ 0.33
RABGGTA-209ENST00000559551 RAI14Q9P0K7 980 aa17.14■□□□□ 0.33
RABGGTA-209ENST00000559551 PSME4Q14997 1843 aa17.13■□□□□ 0.33
RABGGTA-209ENST00000559551 STRBPQ96SI9 672 aaKnown RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms