RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 ANKRD36CQ5JPF3 1778 aa11.3□□□□□ -0.6
VRK1-206ENST00000557222 TRPM7Q96QT4 1865 aa11.29□□□□□ -0.6
VRK1-206ENST00000557222 CA12O43570 354 aa11.29□□□□□ -0.6
VRK1-206ENST00000557222 METTL3Q86U44 580 aaKnown RBP11.29□□□□□ -0.6
VRK1-206ENST00000557222 GPR101Q96P66 508 aaPredicted RBP11.29□□□□□ -0.6
VRK1-206ENST00000557222 TULP1O00294 542 aaPredicted RBP11.28□□□□□ -0.6
VRK1-206ENST00000557222 ANXA1P04083 346 aa11.28□□□□□ -0.6
VRK1-206ENST00000557222 HCLS1P14317 486 aaPredicted RBP11.28□□□□□ -0.6
VRK1-206ENST00000557222 GMPSP49915 693 aaPredicted RBP11.28□□□□□ -0.6
VRK1-206ENST00000557222 AIMP1Q12904 312 aaKnown RBP11.28□□□□□ -0.6
VRK1-206ENST00000557222 TRIM28Q13263 835 aaKnown RBP11.28□□□□□ -0.6
VRK1-206ENST00000557222 SF3B3Q15393 1217 aaKnown RBP11.28□□□□□ -0.6
VRK1-206ENST00000557222 CDC37L1Q7L3B6 337 aa11.28□□□□□ -0.6
VRK1-206ENST00000557222 SAPCD2Q86UD0 394 aa11.28□□□□□ -0.6
VRK1-206ENST00000557222 PLBD2Q8NHP8 589 aa11.28□□□□□ -0.6
VRK1-206ENST00000557222 DPF2Q92785 391 aa11.28□□□□□ -0.6
VRK1-206ENST00000557222 MTRQ99707 1265 aa11.28□□□□□ -0.6
VRK1-206ENST00000557222 THSD7BQ9C0I4 1608 aa11.27□□□□□ -0.6
VRK1-206ENST00000557222 H7C1D1 291 aa11.27□□□□□ -0.61
VRK1-206ENST00000557222 TRAF5O00463 557 aa11.27□□□□□ -0.61
VRK1-206ENST00000557222 HSP90B1P14625 803 aaKnown RBP11.27□□□□□ -0.61
VRK1-206ENST00000557222 RUNDC1Q96C34 613 aa11.27□□□□□ -0.61
VRK1-206ENST00000557222 ISCA1Q9BUE6 129 aa11.27□□□□□ -0.61
VRK1-206ENST00000557222 BCL2L13Q9BXK5 485 aa11.27□□□□□ -0.61
VRK1-206ENST00000557222 HYPKQ9NX55 129 aa11.27□□□□□ -0.61
VRK1-206ENST00000557222 DBF4Q9UBU7 674 aaPredicted RBP11.27□□□□□ -0.61
VRK1-206ENST00000557222 MYBBP1AQ9BQG0 1328 aaKnown RBP11.27□□□□□ -0.61
VRK1-206ENST00000557222 CELF2O95319 508 aaKnown RBP11.26□□□□□ -0.61
VRK1-206ENST00000557222 RPS12P25398 132 aaKnown RBP11.26□□□□□ -0.61
VRK1-206ENST00000557222 CYP4F22Q6NT55 531 aa11.26□□□□□ -0.61
VRK1-206ENST00000557222 SLC51AQ86UW1 340 aa11.26□□□□□ -0.61
VRK1-206ENST00000557222 ABHD8Q96I13 439 aa11.26□□□□□ -0.61
VRK1-206ENST00000557222 CNOT7Q9UIV1 285 aaKnown RBP11.26□□□□□ -0.61
VRK1-206ENST00000557222 RAD17O75943 681 aa11.25□□□□□ -0.61
VRK1-206ENST00000557222 HIRAP54198 1017 aaPredicted RBP11.25□□□□□ -0.61
VRK1-206ENST00000557222 BRPF1P55201 1214 aaPredicted RBP11.25□□□□□ -0.61
VRK1-206ENST00000557222 FMR1Q06787 632 aaKnown RBP eCLIP11.25□□□□□ -0.61
VRK1-206ENST00000557222 WASHC4Q2M389 1173 aa11.25□□□□□ -0.61
VRK1-206ENST00000557222 HDGFL1Q5TGJ6 251 aa11.25□□□□□ -0.61
VRK1-206ENST00000557222 EYA3Q99504 573 aa11.25□□□□□ -0.61
VRK1-206ENST00000557222 CHMP4AQ9BY43 222 aa11.25□□□□□ -0.61
VRK1-206ENST00000557222 IL21Q9HBE4 155 aa11.25□□□□□ -0.61
VRK1-206ENST00000557222 CHPF2Q9P2E5 772 aa11.25□□□□□ -0.61
VRK1-206ENST00000557222 LAMB2P55268 1798 aa11.25□□□□□ -0.61
VRK1-206ENST00000557222 YDJCA8MPS7 323 aa11.24□□□□□ -0.61
VRK1-206ENST00000557222 RGS20O76081 388 aa11.24□□□□□ -0.61
VRK1-206ENST00000557222 WDR43Q15061 677 aaKnown RBP eCLIP11.24□□□□□ -0.61
VRK1-206ENST00000557222 GLIS2Q9BZE0 524 aaPredicted RBP11.24□□□□□ -0.61
VRK1-206ENST00000557222 LRRC37AA6NMS7 1700 aa11.23□□□□□ -0.61
VRK1-206ENST00000557222 RPS8P62241 208 aaKnown RBP11.23□□□□□ -0.61
VRK1-206ENST00000557222 NOGQ13253 232 aa11.23□□□□□ -0.61
VRK1-206ENST00000557222 NEUROD2Q15784 382 aa11.23□□□□□ -0.61
VRK1-206ENST00000557222 TRPM4Q8TD43 1214 aa11.23□□□□□ -0.61
VRK1-206ENST00000557222 ZNF516Q92618 1163 aa11.23□□□□□ -0.61
VRK1-206ENST00000557222 FAM89AQ96GI7 184 aa11.23□□□□□ -0.61
VRK1-206ENST00000557222 PRR14Q9BWN1 585 aa11.23□□□□□ -0.61
VRK1-206ENST00000557222 PODXL2Q9NZ53 605 aa11.23□□□□□ -0.61
VRK1-206ENST00000557222 NSFL1CQ9UNZ2 370 aaKnown RBP11.23□□□□□ -0.61
VRK1-206ENST00000557222 PSMD14O00487 310 aa11.22□□□□□ -0.61
VRK1-206ENST00000557222 IRS4O14654 1257 aaPredicted RBP11.22□□□□□ -0.61
VRK1-206ENST00000557222 AOC2O75106 756 aa11.22□□□□□ -0.61
VRK1-206ENST00000557222 SLC10A3P09131 477 aa11.22□□□□□ -0.61
VRK1-206ENST00000557222 ZNF853P0CG23 659 aa11.22□□□□□ -0.61
VRK1-206ENST00000557222 RGS19P49795 217 aa11.22□□□□□ -0.61
VRK1-206ENST00000557222 CALD1Q05682 793 aaKnown RBP11.22□□□□□ -0.61
VRK1-206ENST00000557222 KRT24Q2M2I5 525 aa11.22□□□□□ -0.61
VRK1-206ENST00000557222 DUSP27Q5VZP5 1158 aa11.22□□□□□ -0.61
VRK1-206ENST00000557222 CCDC146Q8IYE0 955 aa11.22□□□□□ -0.61
VRK1-206ENST00000557222 ZBTB38Q8NAP3 1195 aaPredicted RBP11.22□□□□□ -0.61
VRK1-206ENST00000557222 CELF1Q92879 486 aaKnown RBP11.22□□□□□ -0.61
VRK1-206ENST00000557222 DUOX1Q9NRD9 1551 aa11.22□□□□□ -0.61
VRK1-206ENST00000557222 POLLQ9UGP5 575 aa11.22□□□□□ -0.61
VRK1-206ENST00000557222 LAS1LQ9Y4W2 734 aaKnown RBP11.22□□□□□ -0.61
VRK1-206ENST00000557222 C6orf229H3BNL8 230 aa11.21□□□□□ -0.61
VRK1-206ENST00000557222 VIL1P09327 827 aaKnown RBP11.21□□□□□ -0.61
VRK1-206ENST00000557222 GRM1Q13255 1194 aa11.21□□□□□ -0.61
VRK1-206ENST00000557222 USP48Q86UV5 1035 aa11.21□□□□□ -0.61
VRK1-206ENST00000557222 CCDC191Q8NCU4 936 aa11.21□□□□□ -0.61
VRK1-206ENST00000557222 TBC1D16Q8TBP0 767 aa11.21□□□□□ -0.61
VRK1-206ENST00000557222 ZC3H12CQ9C0D7 883 aaKnown RBP11.21□□□□□ -0.61
VRK1-206ENST00000557222 ADAMTS8Q9UP79 889 aa11.21□□□□□ -0.61
VRK1-206ENST00000557222 DDX60Q8IY21 1712 aaKnown RBP11.21□□□□□ -0.62
VRK1-206ENST00000557222 ZNF609O15014 1411 aa11.2□□□□□ -0.62
VRK1-206ENST00000557222 ATP5J2-PTCD1G3V325 749 aa11.2□□□□□ -0.62
VRK1-206ENST00000557222 ECE2O60344 883 aa11.2□□□□□ -0.62
VRK1-206ENST00000557222 HUNKP57058 714 aa11.2□□□□□ -0.62
VRK1-206ENST00000557222 COPS2P61201 443 aa11.2□□□□□ -0.62
VRK1-206ENST00000557222 GNAI1P63096 354 aa11.2□□□□□ -0.62
VRK1-206ENST00000557222 GPSM2P81274 684 aa11.2□□□□□ -0.62
VRK1-206ENST00000557222 KRT26Q7Z3Y9 468 aa11.2□□□□□ -0.62
VRK1-206ENST00000557222 RIC3Q7Z5B4 369 aa11.2□□□□□ -0.62
VRK1-206ENST00000557222 C2orf69Q8N8R5 385 aa11.2□□□□□ -0.62
VRK1-206ENST00000557222 CCDC102AQ96A19 550 aa11.2□□□□□ -0.62
VRK1-206ENST00000557222 DCPSQ96C86 337 aaKnown RBP11.2□□□□□ -0.62
VRK1-206ENST00000557222 PHOX2BQ99453 314 aa11.2□□□□□ -0.62
VRK1-206ENST00000557222 DBNDD1Q9H9R9 158 aa11.2□□□□□ -0.62
VRK1-206ENST00000557222 MBIPQ9NS73 344 aa11.2□□□□□ -0.62
VRK1-206ENST00000557222 IFT57Q9NWB7 429 aa11.2□□□□□ -0.62
VRK1-206ENST00000557222 TAF1P21675 1872 aa11.19□□□□□ -0.62
VRK1-206ENST00000557222 PCCAP05165 728 aaPredicted RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 130.7 ms