RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 SUGT1Q9Y2Z0 365 aa13.74□□□□□ -0.21
FOXN3-212ENST00000556541 COL1A1P02452 1464 aaPredicted RBP13.74□□□□□ -0.21
FOXN3-212ENST00000556541 MCAMP43121 646 aa13.73□□□□□ -0.21
FOXN3-212ENST00000556541 RASGRF1Q13972 1273 aa13.73□□□□□ -0.21
FOXN3-212ENST00000556541 TTF1Q15361 905 aaPredicted RBP13.73□□□□□ -0.21
FOXN3-212ENST00000556541 GPR162Q16538 588 aa13.73□□□□□ -0.21
FOXN3-212ENST00000556541 AOC3Q16853 763 aa13.73□□□□□ -0.21
FOXN3-212ENST00000556541 BMP2KLQ5H9B9 411 aa13.73□□□□□ -0.21
FOXN3-212ENST00000556541 TTC22Q5TAA0 569 aa13.73□□□□□ -0.21
FOXN3-212ENST00000556541 STRIP1Q5VSL9 837 aa13.73□□□□□ -0.21
FOXN3-212ENST00000556541 ARHGAP27Q6ZUM4 889 aa13.73□□□□□ -0.21
FOXN3-212ENST00000556541 NIM1KQ8IY84 436 aa13.73□□□□□ -0.21
FOXN3-212ENST00000556541 LARGE2Q8N3Y3 721 aa13.73□□□□□ -0.21
FOXN3-212ENST00000556541 ZGPATQ8N5A5 531 aaKnown RBP13.73□□□□□ -0.21
FOXN3-212ENST00000556541 WDR66Q8TBY9 1149 aa13.73□□□□□ -0.21
FOXN3-212ENST00000556541 JDP2Q8WYK2 163 aa13.73□□□□□ -0.21
FOXN3-212ENST00000556541 ZNF277Q9NRM2 450 aaPredicted RBP13.73□□□□□ -0.21
FOXN3-212ENST00000556541 ZNRF3Q9ULT6 936 aa13.73□□□□□ -0.21
FOXN3-212ENST00000556541 MYO3BQ8WXR4 1341 aa13.72□□□□□ -0.21
FOXN3-212ENST00000556541 FZD9O00144 591 aa13.72□□□□□ -0.21
FOXN3-212ENST00000556541 ECE2O60344 883 aa13.72□□□□□ -0.21
FOXN3-212ENST00000556541 SPATA5Q8NB90 893 aa13.72□□□□□ -0.21
FOXN3-212ENST00000556541 HMG20BQ9P0W2 317 aa13.72□□□□□ -0.21
FOXN3-212ENST00000556541 MYO5AQ9Y4I1 1855 aaKnown RBP13.72□□□□□ -0.21
FOXN3-212ENST00000556541 RIMBP2O15034 1052 aa13.71□□□□□ -0.21
FOXN3-212ENST00000556541 PRELPP51888 382 aa13.71□□□□□ -0.21
FOXN3-212ENST00000556541 RASSF7Q02833 373 aa13.71□□□□□ -0.21
FOXN3-212ENST00000556541 GPR101Q96P66 508 aaPredicted RBP13.71□□□□□ -0.21
FOXN3-212ENST00000556541 CEP350Q5VT06 3117 aa13.7□□□□□ -0.22
FOXN3-212ENST00000556541 USP17L3A6NCW0 530 aa13.7□□□□□ -0.22
FOXN3-212ENST00000556541 USP17L4A6NCW7 530 aa13.7□□□□□ -0.22
FOXN3-212ENST00000556541 G3V3G9 751 aa13.7□□□□□ -0.22
FOXN3-212ENST00000556541 SCARF1Q14162 830 aa13.7□□□□□ -0.22
FOXN3-212ENST00000556541 DCAF8Q5TAQ9 597 aa13.7□□□□□ -0.22
FOXN3-212ENST00000556541 USP17L1Q7RTZ2 530 aa13.7□□□□□ -0.22
FOXN3-212ENST00000556541 EVI5LQ96CN4 794 aa13.7□□□□□ -0.22
FOXN3-212ENST00000556541 YDJCA8MPS7 323 aa13.69□□□□□ -0.22
FOXN3-212ENST00000556541 VIL1P09327 827 aaKnown RBP13.69□□□□□ -0.22
FOXN3-212ENST00000556541 TNIP1Q15025 636 aa13.69□□□□□ -0.22
FOXN3-212ENST00000556541 LRRFIP1Q32MZ4 808 aaKnown RBP13.69□□□□□ -0.22
FOXN3-212ENST00000556541 SPTY2D1Q68D10 685 aaPredicted RBP13.69□□□□□ -0.22
FOXN3-212ENST00000556541 KBTBD3Q8NAB2 608 aa13.69□□□□□ -0.22
FOXN3-212ENST00000556541 MRIQ9BWK5 157 aa13.69□□□□□ -0.22
FOXN3-212ENST00000556541 BOLA2Q9H3K6 86 aa13.69□□□□□ -0.22
FOXN3-212ENST00000556541 DBNDD1Q9H9R9 158 aa13.69□□□□□ -0.22
FOXN3-212ENST00000556541 PAG1Q9NWQ8 432 aa13.69□□□□□ -0.22
FOXN3-212ENST00000556541 WWC3Q9ULE0 1092 aa13.69□□□□□ -0.22
FOXN3-212ENST00000556541 FRAT2O75474 233 aaPredicted RBP13.68□□□□□ -0.22
FOXN3-212ENST00000556541 CYP2E1P05181 493 aaPredicted RBP13.68□□□□□ -0.22
FOXN3-212ENST00000556541 GSPT1P15170 499 aaKnown RBP13.68□□□□□ -0.22
FOXN3-212ENST00000556541 RPS12P25398 132 aaKnown RBP13.68□□□□□ -0.22
FOXN3-212ENST00000556541 ZAP70P43403 619 aa13.68□□□□□ -0.22
FOXN3-212ENST00000556541 DOK7Q18PE1 504 aa13.68□□□□□ -0.22
FOXN3-212ENST00000556541 DACT2Q5SW24 774 aa13.68□□□□□ -0.22
FOXN3-212ENST00000556541 TTLL5Q6EMB2 1281 aa13.68□□□□□ -0.22
FOXN3-212ENST00000556541 CNTROBQ8N137 903 aa13.68□□□□□ -0.22
FOXN3-212ENST00000556541 AGBL3Q8NEM8 1001 aa13.68□□□□□ -0.22
FOXN3-212ENST00000556541 MAST3O60307 1309 aa13.67□□□□□ -0.22
FOXN3-212ENST00000556541 ZFYP08048 801 aaPredicted RBP13.67□□□□□ -0.22
FOXN3-212ENST00000556541 EIF6P56537 245 aaKnown RBP13.67□□□□□ -0.22
FOXN3-212ENST00000556541 HDLBPQ00341 1268 aaKnown RBP13.67□□□□□ -0.22
FOXN3-212ENST00000556541 CIAPIN1Q6FI81 312 aa13.67□□□□□ -0.22
FOXN3-212ENST00000556541 ZSCAN25Q6NSZ9 544 aa13.67□□□□□ -0.22
FOXN3-212ENST00000556541 PELP1Q8IZL8 1130 aaKnown RBP13.67□□□□□ -0.22
FOXN3-212ENST00000556541 GMLQ99445 158 aa13.67□□□□□ -0.22
FOXN3-212ENST00000556541 MYH2Q9UKX2 1941 aa13.66□□□□□ -0.22
FOXN3-212ENST00000556541 HIP1O00291 1037 aa13.66□□□□□ -0.22
FOXN3-212ENST00000556541 RGS3P49796 1198 aa13.66□□□□□ -0.22
FOXN3-212ENST00000556541 GTF2IP78347 998 aa13.66□□□□□ -0.22
FOXN3-212ENST00000556541 CXCL9Q07325 125 aa13.66□□□□□ -0.22
FOXN3-212ENST00000556541 MFSD14BQ5SR56 506 aa13.66□□□□□ -0.22
FOXN3-212ENST00000556541 TSHZ3Q63HK5 1081 aa13.66□□□□□ -0.22
FOXN3-212ENST00000556541 RSBN1LQ6PCB5 846 aaPredicted RBP13.66□□□□□ -0.22
FOXN3-212ENST00000556541 DPF2Q92785 391 aa13.66□□□□□ -0.22
FOXN3-212ENST00000556541 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.66□□□□□ -0.22
FOXN3-212ENST00000556541 RNF181Q9P0P0 153 aa13.66□□□□□ -0.22
FOXN3-212ENST00000556541 SCN4AP35499 1836 aa13.66□□□□□ -0.22
FOXN3-212ENST00000556541 ECM29Q5VYK3 1845 aa13.66□□□□□ -0.22
FOXN3-212ENST00000556541 GOLGB1Q14789 3259 aaKnown RBP13.65□□□□□ -0.22
FOXN3-212ENST00000556541 WDR90Q96KV7 1748 aa13.65□□□□□ -0.22
FOXN3-212ENST00000556541 GOLIM4O00461 696 aa13.65□□□□□ -0.22
FOXN3-212ENST00000556541 SDSP20132 328 aa13.65□□□□□ -0.22
FOXN3-212ENST00000556541 MAP3K12Q12852 859 aa13.65□□□□□ -0.22
FOXN3-212ENST00000556541 UBE3CQ15386 1083 aa13.65□□□□□ -0.22
FOXN3-212ENST00000556541 C9orf131Q5VYM1 1079 aa13.65□□□□□ -0.22
FOXN3-212ENST00000556541 PI16Q6UXB8 463 aa13.65□□□□□ -0.22
FOXN3-212ENST00000556541 ERICH6Q7L0X2 663 aa13.65□□□□□ -0.22
FOXN3-212ENST00000556541 CERS3Q8IU89 383 aa13.65□□□□□ -0.22
FOXN3-212ENST00000556541 SLF2Q8IX21 1173 aa13.65□□□□□ -0.22
FOXN3-212ENST00000556541 GPC2Q8N158 579 aa13.65□□□□□ -0.22
FOXN3-212ENST00000556541 FAM163AQ96GL9 167 aaPredicted RBP13.65□□□□□ -0.22
FOXN3-212ENST00000556541 DNAJC2Q99543 621 aaKnown RBP13.65□□□□□ -0.22
FOXN3-212ENST00000556541 PSMD14O00487 310 aa13.64□□□□□ -0.23
FOXN3-212ENST00000556541 MAP4K4O95819 1239 aaPredicted RBP13.64□□□□□ -0.23
FOXN3-212ENST00000556541 LDHBP07195 334 aaKnown RBP13.64□□□□□ -0.23
FOXN3-212ENST00000556541 GSTO1P78417 241 aa13.64□□□□□ -0.23
FOXN3-212ENST00000556541 CERS5Q8N5B7 392 aa13.64□□□□□ -0.23
FOXN3-212ENST00000556541 PIH1D3Q9NQM4 214 aaKnown RBP13.64□□□□□ -0.23
FOXN3-212ENST00000556541 SNRKQ9NRH2 765 aa13.64□□□□□ -0.23
FOXN3-212ENST00000556541 IQSEC3Q9UPP2 1182 aaPredicted RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms