RNA–Protein interactions for RNA: ENST00000555394.5

NUMB-216, Transcript of NUMB, endocytic adaptor protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene NUMB, Length 3,037 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-216ENST00000555394 DDX11Q96FC9 970 aa17.12■□□□□ 0.33
NUMB-216ENST00000555394 GJD4Q96KN9 370 aaPredicted RBP17.12■□□□□ 0.33
NUMB-216ENST00000555394 RTN4Q9NQC3 1192 aaKnown RBP17.12■□□□□ 0.33
NUMB-216ENST00000555394 ATP6V1DQ9Y5K8 247 aa17.12■□□□□ 0.33
NUMB-216ENST00000555394 COL4A1P02462 1669 aa17.12■□□□□ 0.33
NUMB-216ENST00000555394 RPS6KA4O75676 772 aa17.12■□□□□ 0.33
NUMB-216ENST00000555394 GTF2E1P29083 439 aaPredicted RBP17.12■□□□□ 0.33
NUMB-216ENST00000555394 AGXT2Q9BYV1 514 aa17.12■□□□□ 0.33
NUMB-216ENST00000555394 CICQ96RK0 1608 aaPredicted RBP17.11■□□□□ 0.33
NUMB-216ENST00000555394 AKAP11Q9UKA4 1901 aa17.11■□□□□ 0.33
NUMB-216ENST00000555394 TCRBV5S4A2TA0A5A2 114 aa17.11■□□□□ 0.33
NUMB-216ENST00000555394 SYCE3A1L190 88 aa17.11■□□□□ 0.33
NUMB-216ENST00000555394 CCT2P78371 535 aaKnown RBP17.11■□□□□ 0.33
NUMB-216ENST00000555394 TMEM87AQ8NBN3 555 aa17.11■□□□□ 0.33
NUMB-216ENST00000555394 NARFQ9UHQ1 456 aa17.11■□□□□ 0.33
NUMB-216ENST00000555394 NAP1L2Q9ULW6 460 aaPredicted RBP17.11■□□□□ 0.33
NUMB-216ENST00000555394 PFKFB2O60825 505 aa17.1■□□□□ 0.33
NUMB-216ENST00000555394 PPFIA3O75145 1194 aa17.1■□□□□ 0.33
NUMB-216ENST00000555394 PDCP20941 246 aa17.1■□□□□ 0.33
NUMB-216ENST00000555394 RC3H1Q5TC82 1133 aaKnown RBP17.1■□□□□ 0.33
NUMB-216ENST00000555394 CDC5LQ99459 802 aaKnown RBP17.1■□□□□ 0.33
NUMB-216ENST00000555394 IQSEC3Q9UPP2 1182 aaPredicted RBP17.1■□□□□ 0.33
NUMB-216ENST00000555394 COL5A3P25940 1745 aaPredicted RBP17.1■□□□□ 0.33
NUMB-216ENST00000555394 ZNF213O14771 459 aa17.1■□□□□ 0.33
NUMB-216ENST00000555394 APPP05067 770 aa17.1■□□□□ 0.33
NUMB-216ENST00000555394 SF3B3Q15393 1217 aaKnown RBP17.1■□□□□ 0.33
NUMB-216ENST00000555394 NCOA5Q9HCD5 579 aaKnown RBP17.1■□□□□ 0.33
NUMB-216ENST00000555394 DENND2AQ9ULE3 1009 aa17.1■□□□□ 0.33
NUMB-216ENST00000555394 DDX60Q8IY21 1712 aaKnown RBP17.1■□□□□ 0.33
NUMB-216ENST00000555394 ANKRD18AQ8IVF6 992 aa17.1■□□□□ 0.33
NUMB-216ENST00000555394 MAGEB6Q8N7X4 407 aa17.1■□□□□ 0.33
NUMB-216ENST00000555394 CTDNEP1O95476 244 aa17.09■□□□□ 0.33
NUMB-216ENST00000555394 HSPA1LP34931 641 aa17.09■□□□□ 0.33
NUMB-216ENST00000555394 CELF1Q92879 486 aaKnown RBP17.09■□□□□ 0.33
NUMB-216ENST00000555394 NKX2-3Q8TAU0 364 aa17.09■□□□□ 0.33
NUMB-216ENST00000555394 ARHGEF1Q92888 912 aaKnown RBP17.09■□□□□ 0.33
NUMB-216ENST00000555394 SETDB2Q96T68 719 aa17.09■□□□□ 0.33
NUMB-216ENST00000555394 NBPF3Q9H094 633 aa17.09■□□□□ 0.33
NUMB-216ENST00000555394 ZPR1O75312 459 aa17.08■□□□□ 0.33
NUMB-216ENST00000555394 PDIA3P30101 505 aaKnown RBP17.08■□□□□ 0.33
NUMB-216ENST00000555394 STRBPQ96SI9 672 aaKnown RBP17.08■□□□□ 0.33
NUMB-216ENST00000555394 RTCBQ9Y3I0 505 aaKnown RBP17.08■□□□□ 0.33
NUMB-216ENST00000555394 AFF2P51816 1311 aa17.08■□□□□ 0.32
NUMB-216ENST00000555394 NSUN7Q8NE18 718 aaKnown RBP17.08■□□□□ 0.32
NUMB-216ENST00000555394 RBSNQ9H1K0 784 aa17.08■□□□□ 0.32
NUMB-216ENST00000555394 MAP3K12Q12852 859 aa17.07■□□□□ 0.32
NUMB-216ENST00000555394 SLC10A5Q5PT55 438 aa17.07■□□□□ 0.32
NUMB-216ENST00000555394 MB21D2Q8IYB1 491 aaPredicted RBP17.07■□□□□ 0.32
NUMB-216ENST00000555394 AIDAQ96BJ3 306 aa17.07■□□□□ 0.32
NUMB-216ENST00000555394 GYG1P46976 350 aa17.07■□□□□ 0.32
NUMB-216ENST00000555394 ANTXR2P58335 489 aa17.07■□□□□ 0.32
NUMB-216ENST00000555394 SMARCC2Q8TAQ2 1214 aa17.07■□□□□ 0.32
NUMB-216ENST00000555394 MINPP1Q9UNW1 487 aa17.07■□□□□ 0.32
NUMB-216ENST00000555394 PRC1O43663 620 aa17.07■□□□□ 0.32
NUMB-216ENST00000555394 PHF14O94880 888 aa17.07■□□□□ 0.32
NUMB-216ENST00000555394 NBPF5PQ86XG9 351 aaPredicted RBP17.07■□□□□ 0.32
NUMB-216ENST00000555394 BSDC1Q9NW68 430 aaPredicted RBP17.07■□□□□ 0.32
NUMB-216ENST00000555394 NASPP49321 788 aaPredicted RBP17.06■□□□□ 0.32
NUMB-216ENST00000555394 UBE2HP62256 183 aa17.06■□□□□ 0.32
NUMB-216ENST00000555394 LRSAM1Q6UWE0 723 aa17.06■□□□□ 0.32
NUMB-216ENST00000555394 TBC1D10CQ8IV04 446 aa17.06■□□□□ 0.32
NUMB-216ENST00000555394 NCOA7Q8NI08 942 aa17.06■□□□□ 0.32
NUMB-216ENST00000555394 CERKQ8TCT0 537 aa17.06■□□□□ 0.32
NUMB-216ENST00000555394 TCHHQ07283 1943 aa17.06■□□□□ 0.32
NUMB-216ENST00000555394 FOSBP53539 338 aa17.06■□□□□ 0.32
NUMB-216ENST00000555394 SEPT12Q8IYM1 358 aa17.06■□□□□ 0.32
NUMB-216ENST00000555394 ZNF274Q96GC6 653 aaPredicted RBP17.06■□□□□ 0.32
NUMB-216ENST00000555394 ARMT1Q9H993 441 aa17.06■□□□□ 0.32
NUMB-216ENST00000555394 ATRNO75882 1429 aa17.06■□□□□ 0.32
NUMB-216ENST00000555394 PTPDC1A2A3K4 754 aa17.05■□□□□ 0.32
NUMB-216ENST00000555394 MBD4O95243 580 aa17.05■□□□□ 0.32
NUMB-216ENST00000555394 PDIA4P13667 645 aaKnown RBP17.05■□□□□ 0.32
NUMB-216ENST00000555394 MCM5P33992 734 aa17.05■□□□□ 0.32
NUMB-216ENST00000555394 FAM184AQ8NB25 1140 aa17.05■□□□□ 0.32
NUMB-216ENST00000555394 LLPHQ9BRT6 129 aaKnown RBP17.05■□□□□ 0.32
NUMB-216ENST00000555394 INCENPQ9NQS7 918 aa17.05■□□□□ 0.32
NUMB-216ENST00000555394 TFIP11Q9UBB9 837 aaKnown RBP17.05■□□□□ 0.32
NUMB-216ENST00000555394 RALYLQ86SE5 291 aaKnown RBP17.05■□□□□ 0.32
NUMB-216ENST00000555394 RAB11FIP4Q86YS3 637 aa17.05■□□□□ 0.32
NUMB-216ENST00000555394 TTC6Q86TZ1 520 aa17.05■□□□□ 0.32
NUMB-216ENST00000555394 FBXL16Q8N461 479 aa17.05■□□□□ 0.32
NUMB-216ENST00000555394 NLRP3Q96P20 1036 aa17.05■□□□□ 0.32
NUMB-216ENST00000555394 BCORQ6W2J9 1755 aa17.04■□□□□ 0.32
NUMB-216ENST00000555394 PRKAB2O43741 272 aa17.04■□□□□ 0.32
NUMB-216ENST00000555394 EPB41L4AQ9HCS5 686 aaPredicted RBP17.04■□□□□ 0.32
NUMB-216ENST00000555394 LRP2BPQ9P2M1 347 aa17.04■□□□□ 0.32
NUMB-216ENST00000555394 LAMA4Q16363 1823 aa17.04■□□□□ 0.32
NUMB-216ENST00000555394 ZNF831Q5JPB2 1677 aa17.04■□□□□ 0.32
NUMB-216ENST00000555394 THSD7AQ9UPZ6 1657 aa17.04■□□□□ 0.32
NUMB-216ENST00000555394 MYO5AQ9Y4I1 1855 aaKnown RBP17.04■□□□□ 0.32
NUMB-216ENST00000555394 H3BQV1 296 aa17.04■□□□□ 0.32
NUMB-216ENST00000555394 EVCP57679 992 aa17.04■□□□□ 0.32
NUMB-216ENST00000555394 KRT85P78386 507 aa17.04■□□□□ 0.32
NUMB-216ENST00000555394 IFFO2Q5TF58 517 aa17.04■□□□□ 0.32
NUMB-216ENST00000555394 NYXQ9GZU5 481 aa17.04■□□□□ 0.32
NUMB-216ENST00000555394 BTAF1O14981 1849 aa17.03■□□□□ 0.32
NUMB-216ENST00000555394 PATL2C9JE40 543 aaKnown RBP17.03■□□□□ 0.32
NUMB-216ENST00000555394 RGL2O15211 777 aa17.03■□□□□ 0.32
NUMB-216ENST00000555394 TPTE2Q6XPS3 522 aa17.03■□□□□ 0.32
NUMB-216ENST00000555394 FAM196AQ6ZSG2 479 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms