RNA–Protein interactions for RNA: ENST00000555049.5

CCNK-204, Transcript of cyclin K, humanhuman

TSL 1 (best) BASIC

Gene CCNK, Length 1,606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNK-204ENST00000555049 ALDH1L1O75891 902 aa12.19□□□□□ -0.46
CCNK-204ENST00000555049 TRIM27P14373 513 aa12.19□□□□□ -0.46
CCNK-204ENST00000555049 PRELPP51888 382 aa12.19□□□□□ -0.46
CCNK-204ENST00000555049 TSC1Q92574 1164 aa12.19□□□□□ -0.46
CCNK-204ENST00000555049 SEC31BQ9NQW1 1179 aa12.19□□□□□ -0.46
CCNK-204ENST00000555049 PAXBP1Q9Y5B6 917 aa12.19□□□□□ -0.46
CCNK-204ENST00000555049 RAD50Q92878 1312 aa12.19□□□□□ -0.46
CCNK-204ENST00000555049 NFKBIEO00221 500 aa12.19□□□□□ -0.46
CCNK-204ENST00000555049 GRM8O00222 908 aa12.19□□□□□ -0.46
CCNK-204ENST00000555049 ZBTB22O15209 634 aa12.19□□□□□ -0.46
CCNK-204ENST00000555049 CDC45O75419 566 aa12.19□□□□□ -0.46
CCNK-204ENST00000555049 NBPF7P0C2Y1 421 aaPredicted RBP12.19□□□□□ -0.46
CCNK-204ENST00000555049 CLCN6P51797 869 aa12.19□□□□□ -0.46
CCNK-204ENST00000555049 CTSWP56202 376 aa12.19□□□□□ -0.46
CCNK-204ENST00000555049 RASSF7Q02833 373 aa12.19□□□□□ -0.46
CCNK-204ENST00000555049 SLFNL1Q499Z3 407 aa12.19□□□□□ -0.46
CCNK-204ENST00000555049 TTLL11Q8NHH1 800 aa12.19□□□□□ -0.46
CCNK-204ENST00000555049 KIF18AQ8NI77 898 aa12.19□□□□□ -0.46
CCNK-204ENST00000555049 ARHGAP45Q92619 1136 aa12.19□□□□□ -0.46
CCNK-204ENST00000555049 CELF1Q92879 486 aaKnown RBP12.19□□□□□ -0.46
CCNK-204ENST00000555049 GCC1Q96CN9 775 aa12.19□□□□□ -0.46
CCNK-204ENST00000555049 RBM27Q9P2N5 1060 aaKnown RBP12.19□□□□□ -0.46
CCNK-204ENST00000555049 SNED1Q8TER0 1413 aa12.18□□□□□ -0.46
CCNK-204ENST00000555049 PPEF1O14829 653 aaPredicted RBP12.18□□□□□ -0.46
CCNK-204ENST00000555049 CAPN2P17655 700 aa12.18□□□□□ -0.46
CCNK-204ENST00000555049 EPHA10Q5JZY3 1008 aa12.18□□□□□ -0.46
CCNK-204ENST00000555049 RNF20Q5VTR2 975 aa12.18□□□□□ -0.46
CCNK-204ENST00000555049 DDX46Q7L014 1031 aaKnown RBP12.18□□□□□ -0.46
CCNK-204ENST00000555049 CHD1LQ86WJ1 897 aa12.18□□□□□ -0.46
CCNK-204ENST00000555049 ZNF397Q8NF99 534 aaPredicted RBP12.18□□□□□ -0.46
CCNK-204ENST00000555049 PLA2G12BQ9BX93 195 aa12.18□□□□□ -0.46
CCNK-204ENST00000555049 API5Q9BZZ5 524 aaKnown RBP12.18□□□□□ -0.46
CCNK-204ENST00000555049 CACNA1SQ13698 1873 aa12.18□□□□□ -0.46
CCNK-204ENST00000555049 UTYO14607 1347 aa12.17□□□□□ -0.46
CCNK-204ENST00000555049 ST18O60284 1047 aa12.17□□□□□ -0.46
CCNK-204ENST00000555049 FOXO4P98177 505 aa12.17□□□□□ -0.46
CCNK-204ENST00000555049 GRAPQ13588 217 aa12.17□□□□□ -0.46
CCNK-204ENST00000555049 ATF7IPQ6VMQ6 1270 aa12.17□□□□□ -0.46
CCNK-204ENST00000555049 GRAPLQ8TC17 118 aaPredicted RBP12.17□□□□□ -0.46
CCNK-204ENST00000555049 SECISBP2LQ93073 1101 aaKnown RBP12.17□□□□□ -0.46
CCNK-204ENST00000555049 KAZALD1Q96I82 304 aa12.17□□□□□ -0.46
CCNK-204ENST00000555049 USP44Q9H0E7 712 aa12.17□□□□□ -0.46
CCNK-204ENST00000555049 GREM2Q9H772 168 aa12.17□□□□□ -0.46
CCNK-204ENST00000555049 C9orf78Q9NZ63 289 aaPredicted RBP12.17□□□□□ -0.46
CCNK-204ENST00000555049 REC8O95072 547 aa12.16□□□□□ -0.46
CCNK-204ENST00000555049 HSP90B1P14625 803 aaKnown RBP12.16□□□□□ -0.46
CCNK-204ENST00000555049 CCDC152Q4G0S7 254 aa12.16□□□□□ -0.46
CCNK-204ENST00000555049 SUCLG2Q96I99 432 aa12.16□□□□□ -0.46
CCNK-204ENST00000555049 BCCIPQ9P287 314 aaKnown RBP eCLIP12.16□□□□□ -0.46
CCNK-204ENST00000555049 TAF1P21675 1872 aa12.16□□□□□ -0.46
CCNK-204ENST00000555049 TRIM6-TRIM34B2RNG4 842 aa12.15□□□□□ -0.46
CCNK-204ENST00000555049 IPO8O15397 1037 aaKnown RBP12.15□□□□□ -0.46
CCNK-204ENST00000555049 ADCY5O95622 1261 aa12.15□□□□□ -0.46
CCNK-204ENST00000555049 CSF1RP07333 972 aa12.15□□□□□ -0.46
CCNK-204ENST00000555049 MCM2P49736 904 aa12.15□□□□□ -0.46
CCNK-204ENST00000555049 CCT4P50991 539 aaKnown RBP12.15□□□□□ -0.46
CCNK-204ENST00000555049 CCDC93Q567U6 631 aa12.15□□□□□ -0.46
CCNK-204ENST00000555049 MUM1L1Q5H9M0 696 aa12.15□□□□□ -0.46
CCNK-204ENST00000555049 TBC1D9Q6ZT07 1266 aa12.15□□□□□ -0.46
CCNK-204ENST00000555049 TRIM34Q9BYJ4 488 aa12.15□□□□□ -0.46
CCNK-204ENST00000555049 FEZ2Q9UHY8 353 aaPredicted RBP12.15□□□□□ -0.46
CCNK-204ENST00000555049 ATP6V0A2Q9Y487 856 aa12.15□□□□□ -0.46
CCNK-204ENST00000555049 BBOX1O75936 387 aa12.15□□□□□ -0.47
CCNK-204ENST00000555049 YY1P25490 414 aa12.15□□□□□ -0.47
CCNK-204ENST00000555049 INTS3Q68E01 1043 aaKnown RBP12.15□□□□□ -0.47
CCNK-204ENST00000555049 BRMS1Q9HCU9 246 aa12.15□□□□□ -0.47
CCNK-204ENST00000555049 KDM4AO75164 1064 aa12.14□□□□□ -0.47
CCNK-204ENST00000555049 CYP2C19P33261 490 aa12.14□□□□□ -0.47
CCNK-204ENST00000555049 RPS8P62241 208 aaKnown RBP12.14□□□□□ -0.47
CCNK-204ENST00000555049 SOGA3Q5TF21 947 aa12.14□□□□□ -0.47
CCNK-204ENST00000555049 C9orf131Q5VYM1 1079 aa12.14□□□□□ -0.47
CCNK-204ENST00000555049 LMBR1LQ6UX01 489 aa12.14□□□□□ -0.47
CCNK-204ENST00000555049 SP8Q8IXZ3 490 aa12.14□□□□□ -0.47
CCNK-204ENST00000555049 TMEM87AQ8NBN3 555 aa12.14□□□□□ -0.47
CCNK-204ENST00000555049 RNF214Q8ND24 703 aa12.14□□□□□ -0.47
CCNK-204ENST00000555049 TAOK3Q9H2K8 898 aa12.14□□□□□ -0.47
CCNK-204ENST00000555049 ZBTB40Q9NUA8 1239 aa12.14□□□□□ -0.47
CCNK-204ENST00000555049 RTL9Q8NET4 1388 aa12.14□□□□□ -0.47
CCNK-204ENST00000555049 FER1L6Q2WGJ9 1857 aa12.13□□□□□ -0.47
CCNK-204ENST00000555049 ITGA6P23229 1130 aa12.13□□□□□ -0.47
CCNK-204ENST00000555049 CCDC183Q5T5S1 534 aa12.13□□□□□ -0.47
CCNK-204ENST00000555049 RTKN2Q8IZC4 609 aa12.13□□□□□ -0.47
CCNK-204ENST00000555049 TMEM57Q8N5G2 664 aa12.13□□□□□ -0.47
CCNK-204ENST00000555049 ANKRD44Q8N8A2 993 aa12.13□□□□□ -0.47
CCNK-204ENST00000555049 MEIS3Q99687 375 aa12.13□□□□□ -0.47
CCNK-204ENST00000555049 TTC12Q9H892 705 aaPredicted RBP12.13□□□□□ -0.47
CCNK-204ENST00000555049 RNF181Q9P0P0 153 aa12.13□□□□□ -0.47
CCNK-204ENST00000555049 ZDHHC9Q9Y397 364 aa12.13□□□□□ -0.47
CCNK-204ENST00000555049 LTBP3Q9NS15 1303 aa12.13□□□□□ -0.47
CCNK-204ENST00000555049 IGSF3O75054 1194 aa12.12□□□□□ -0.47
CCNK-204ENST00000555049 LMNB1P20700 586 aa12.12□□□□□ -0.47
CCNK-204ENST00000555049 FKBP4Q02790 459 aaKnown RBP eCLIP12.12□□□□□ -0.47
CCNK-204ENST00000555049 KIF1BPQ96EK5 621 aa12.12□□□□□ -0.47
CCNK-204ENST00000555049 BICC1Q9H694 974 aaKnown RBP12.12□□□□□ -0.47
CCNK-204ENST00000555049 ZNF277Q9NRM2 450 aaPredicted RBP12.12□□□□□ -0.47
CCNK-204ENST00000555049 BRD1O95696 1058 aa12.11□□□□□ -0.47
CCNK-204ENST00000555049 CC2D2BQ6DHV5 1058 aa12.11□□□□□ -0.47
CCNK-204ENST00000555049 ANKRD18AQ8IVF6 992 aa12.11□□□□□ -0.47
CCNK-204ENST00000555049 PSMD1Q99460 953 aa12.11□□□□□ -0.47
CCNK-204ENST00000555049 SSUH2Q9Y2M2 353 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms