RNA–Protein interactions for RNA: ENST00000552412.1

CCDC59-206, Transcript of coiled-coil domain containing 59, humanhuman

TSL 3

Gene CCDC59, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-206ENST00000552412 SCN7AQ01118 1682 aa8.1□□□□□ -1.11
CCDC59-206ENST00000552412 MAST3O60307 1309 aa8.09□□□□□ -1.11
CCDC59-206ENST00000552412 ZMYM6O95789 1325 aa8.09□□□□□ -1.11
CCDC59-206ENST00000552412 UBN2Q6ZU65 1347 aa8.09□□□□□ -1.11
CCDC59-206ENST00000552412 CNTNAP4Q9C0A0 1308 aa8.09□□□□□ -1.11
CCDC59-206ENST00000552412 THSD7AQ9UPZ6 1657 aa8.09□□□□□ -1.11
CCDC59-206ENST00000552412 DOCK2Q92608 1830 aa8.09□□□□□ -1.11
CCDC59-206ENST00000552412 PRPF40AO75400 957 aaKnown RBP8.09□□□□□ -1.11
CCDC59-206ENST00000552412 CAMTA2O94983 1202 aa8.09□□□□□ -1.11
CCDC59-206ENST00000552412 PDE8BO95263 885 aa8.09□□□□□ -1.11
CCDC59-206ENST00000552412 ADAMTS2O95450 1211 aa8.09□□□□□ -1.11
CCDC59-206ENST00000552412 GJB2P29033 226 aa8.09□□□□□ -1.11
CCDC59-206ENST00000552412 ARID4AP29374 1257 aaPredicted RBP8.09□□□□□ -1.11
CCDC59-206ENST00000552412 ATP6V1AP38606 617 aa8.09□□□□□ -1.11
CCDC59-206ENST00000552412 TOB2Q14106 344 aaPredicted RBP8.09□□□□□ -1.11
CCDC59-206ENST00000552412 PUM3Q15397 648 aaKnown RBP8.09□□□□□ -1.11
CCDC59-206ENST00000552412 ME3Q16798 604 aa8.09□□□□□ -1.11
CCDC59-206ENST00000552412 NOL8Q76FK4 1167 aaKnown RBP8.09□□□□□ -1.11
CCDC59-206ENST00000552412 CCDC83Q8IWF9 413 aa8.09□□□□□ -1.11
CCDC59-206ENST00000552412 MARCH10Q8NA82 808 aaPredicted RBP8.09□□□□□ -1.11
CCDC59-206ENST00000552412 LPIN2Q92539 896 aa8.09□□□□□ -1.11
CCDC59-206ENST00000552412 GTF3C6Q969F1 213 aa8.09□□□□□ -1.11
CCDC59-206ENST00000552412 EDC3Q96F86 508 aaKnown RBP8.09□□□□□ -1.11
CCDC59-206ENST00000552412 UTP14AQ9BVJ6 771 aaKnown RBP8.09□□□□□ -1.11
CCDC59-206ENST00000552412 PUS3Q9BZE2 481 aaKnown RBP8.09□□□□□ -1.11
CCDC59-206ENST00000552412 GREM2Q9H772 168 aa8.09□□□□□ -1.11
CCDC59-206ENST00000552412 CNNM1Q9NRU3 951 aa8.09□□□□□ -1.11
CCDC59-206ENST00000552412 NHSQ6T4R5 1651 aa8.08□□□□□ -1.12
CCDC59-206ENST00000552412 SPATA31A6Q5VVP1 1343 aa8.08□□□□□ -1.12
CCDC59-206ENST00000552412 LETM1O95202 739 aaPredicted RBP8.08□□□□□ -1.12
CCDC59-206ENST00000552412 CYP21A2P08686 494 aa8.08□□□□□ -1.12
CCDC59-206ENST00000552412 HSPD1P10809 573 aaKnown RBP8.08□□□□□ -1.12
CCDC59-206ENST00000552412 FGFR2P21802 821 aa8.08□□□□□ -1.12
CCDC59-206ENST00000552412 GPTP24298 496 aa8.08□□□□□ -1.12
CCDC59-206ENST00000552412 UBE2HP62256 183 aa8.08□□□□□ -1.12
CCDC59-206ENST00000552412 HMGN5P82970 282 aaKnown RBP8.08□□□□□ -1.12
CCDC59-206ENST00000552412 ZSCAN23Q3MJ62 389 aa8.08□□□□□ -1.12
CCDC59-206ENST00000552412 CCDC152Q4G0S7 254 aa8.08□□□□□ -1.12
CCDC59-206ENST00000552412 RC3H1Q5TC82 1133 aaKnown RBP8.08□□□□□ -1.12
CCDC59-206ENST00000552412 CAVIN1Q6NZI2 390 aaKnown RBP8.08□□□□□ -1.12
CCDC59-206ENST00000552412 DHX32Q7L7V1 743 aaKnown RBP8.08□□□□□ -1.12
CCDC59-206ENST00000552412 CDAN1Q8IWY9 1227 aa8.08□□□□□ -1.12
CCDC59-206ENST00000552412 GPT2Q8TD30 523 aa8.08□□□□□ -1.12
CCDC59-206ENST00000552412 ANP32BQ92688 251 aaKnown RBP8.08□□□□□ -1.12
CCDC59-206ENST00000552412 TPCN1Q9ULQ1 816 aa8.08□□□□□ -1.12
CCDC59-206ENST00000552412 MTMR6Q9Y217 621 aa8.08□□□□□ -1.12
CCDC59-206ENST00000552412 CARMIL3Q8ND23 1372 aa8.08□□□□□ -1.12
CCDC59-206ENST00000552412 ELP1O95163 1332 aa8.07□□□□□ -1.12
CCDC59-206ENST00000552412 COL24A1Q17RW2 1714 aa8.07□□□□□ -1.12
CCDC59-206ENST00000552412 LARGE1O95461 756 aa8.07□□□□□ -1.12
CCDC59-206ENST00000552412 SLC5A1P13866 664 aa8.07□□□□□ -1.12
CCDC59-206ENST00000552412 EMP3P54852 163 aa8.07□□□□□ -1.12
CCDC59-206ENST00000552412 EVCP57679 992 aa8.07□□□□□ -1.12
CCDC59-206ENST00000552412 ST3GAL1Q11201 340 aa8.07□□□□□ -1.12
CCDC59-206ENST00000552412 UBE3CQ15386 1083 aa8.07□□□□□ -1.12
CCDC59-206ENST00000552412 IMMTQ16891 758 aaKnown RBP8.07□□□□□ -1.12
CCDC59-206ENST00000552412 LRSAM1Q6UWE0 723 aa8.07□□□□□ -1.12
CCDC59-206ENST00000552412 FAM43AQ8N2R8 423 aa8.07□□□□□ -1.12
CCDC59-206ENST00000552412 FNBP4Q8N3X1 1017 aaPredicted RBP8.07□□□□□ -1.12
CCDC59-206ENST00000552412 CDC5LQ99459 802 aaKnown RBP8.07□□□□□ -1.12
CCDC59-206ENST00000552412 TBC1D2BQ9UPU7 963 aa8.07□□□□□ -1.12
CCDC59-206ENST00000552412 BCL9LQ86UU0 1499 aa8.06□□□□□ -1.12
CCDC59-206ENST00000552412 PFKFB2O60825 505 aa8.06□□□□□ -1.12
CCDC59-206ENST00000552412 IGSF3O75054 1194 aa8.06□□□□□ -1.12
CCDC59-206ENST00000552412 NTSR2O95665 410 aa8.06□□□□□ -1.12
CCDC59-206ENST00000552412 CPA1P15085 419 aa8.06□□□□□ -1.12
CCDC59-206ENST00000552412 ADORA1P30542 326 aa8.06□□□□□ -1.12
CCDC59-206ENST00000552412 ADD2P35612 726 aa8.06□□□□□ -1.12
CCDC59-206ENST00000552412 IGHMBP2P38935 993 aaKnown RBP8.06□□□□□ -1.12
CCDC59-206ENST00000552412 ZAP70P43403 619 aa8.06□□□□□ -1.12
CCDC59-206ENST00000552412 KRT85P78386 507 aa8.06□□□□□ -1.12
CCDC59-206ENST00000552412 EXOSC10Q01780 885 aaKnown RBP8.06□□□□□ -1.12
CCDC59-206ENST00000552412 FKBP4Q02790 459 aaKnown RBP eCLIP8.06□□□□□ -1.12
CCDC59-206ENST00000552412 CCDC173Q0VFZ6 552 aa8.06□□□□□ -1.12
CCDC59-206ENST00000552412 ITPK1Q13572 414 aa8.06□□□□□ -1.12
CCDC59-206ENST00000552412 DOK7Q18PE1 504 aa8.06□□□□□ -1.12
CCDC59-206ENST00000552412 LARP1BQ659C4 914 aaKnown RBP8.06□□□□□ -1.12
CCDC59-206ENST00000552412 ATL3Q6DD88 541 aa8.06□□□□□ -1.12
CCDC59-206ENST00000552412 TMED8Q6PL24 325 aaPredicted RBP8.06□□□□□ -1.12
CCDC59-206ENST00000552412 TMEM92Q6UXU6 159 aa8.06□□□□□ -1.12
CCDC59-206ENST00000552412 CCDC129Q6ZRS4 1044 aa8.06□□□□□ -1.12
CCDC59-206ENST00000552412 FAM184AQ8NB25 1140 aa8.06□□□□□ -1.12
CCDC59-206ENST00000552412 SMARCC2Q8TAQ2 1214 aa8.06□□□□□ -1.12
CCDC59-206ENST00000552412 OSBP2Q969R2 916 aa8.06□□□□□ -1.12
CCDC59-206ENST00000552412 ZNF274Q96GC6 653 aaPredicted RBP8.06□□□□□ -1.12
CCDC59-206ENST00000552412 ARXQ96QS3 562 aa8.06□□□□□ -1.12
CCDC59-206ENST00000552412 SCAND2PQ9GZW5 306 aaPredicted RBP8.06□□□□□ -1.12
CCDC59-206ENST00000552412 ZSCAN16Q9H4T2 348 aaPredicted RBP8.06□□□□□ -1.12
CCDC59-206ENST00000552412 BRPF3Q9ULD4 1205 aa8.06□□□□□ -1.12
CCDC59-206ENST00000552412 A0A1B0GUL6 1792 aa8.06□□□□□ -1.12
CCDC59-206ENST00000552412 BTAF1O14981 1849 aa8.06□□□□□ -1.12
CCDC59-206ENST00000552412 E7EWF7 191 aa8.05□□□□□ -1.12
CCDC59-206ENST00000552412 M0R2C6 588 aa8.05□□□□□ -1.12
CCDC59-206ENST00000552412 MCAMP43121 646 aa8.05□□□□□ -1.12
CCDC59-206ENST00000552412 NASPP49321 788 aaPredicted RBP8.05□□□□□ -1.12
CCDC59-206ENST00000552412 FGD1P98174 961 aa8.05□□□□□ -1.12
CCDC59-206ENST00000552412 ALX1Q15699 326 aa8.05□□□□□ -1.12
CCDC59-206ENST00000552412 WASHC4Q2M389 1173 aa8.05□□□□□ -1.12
CCDC59-206ENST00000552412 CCDC183Q5T5S1 534 aa8.05□□□□□ -1.12
CCDC59-206ENST00000552412 SUSD4Q5VX71 490 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms