RNA–Protein interactions for RNA: ENST00000550075.5

CPSF6-205, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-205ENST00000550075 RBM26Q5T8P6 1007 aaKnown RBP32.11■■■□□ 2.73
CPSF6-205ENST00000550075 HIRAP54198 1017 aaPredicted RBP32.1■■■□□ 2.73
CPSF6-205ENST00000550075 C20orf194Q5TEA3 1177 aa32.1■■■□□ 2.73
CPSF6-205ENST00000550075 MYOZ2Q9NPC6 264 aa32.1■■■□□ 2.73
CPSF6-205ENST00000550075 ZBTB40Q9NUA8 1239 aa32.1■■■□□ 2.73
CPSF6-205ENST00000550075 PGAP2Q9UHJ9 254 aa32.1■■■□□ 2.73
CPSF6-205ENST00000550075 RRP1P56182 461 aaKnown RBP32.09■■■□□ 2.73
CPSF6-205ENST00000550075 TFCP2Q12800 502 aa32.09■■■□□ 2.73
CPSF6-205ENST00000550075 KIAA0825Q8IV33 1275 aa32.09■■■□□ 2.73
CPSF6-205ENST00000550075 GNL3LQ9NVN8 582 aaKnown RBP32.09■■■□□ 2.73
CPSF6-205ENST00000550075 PASKQ96RG2 1323 aa32.08■■■□□ 2.73
CPSF6-205ENST00000550075 ITGBL1O95965 494 aaPredicted RBP32.08■■■□□ 2.73
CPSF6-205ENST00000550075 BCAMP50895 628 aa32.08■■■□□ 2.73
CPSF6-205ENST00000550075 SURF6O75683 361 aaKnown RBP32.07■■■□□ 2.72
CPSF6-205ENST00000550075 TBC1D22AQ8WUA7 517 aa32.07■■■□□ 2.72
CPSF6-205ENST00000550075 IQSEC3Q9UPP2 1182 aaPredicted RBP32.07■■■□□ 2.72
CPSF6-205ENST00000550075 JAG2Q9Y219 1238 aa32.07■■■□□ 2.72
CPSF6-205ENST00000550075 HMMRO75330 724 aa32.06■■■□□ 2.72
CPSF6-205ENST00000550075 EGFRP00533 1210 aa32.06■■■□□ 2.72
CPSF6-205ENST00000550075 MFSD14BQ5SR56 506 aa32.06■■■□□ 2.72
CPSF6-205ENST00000550075 RPAP2Q8IXW5 612 aaPredicted RBP32.06■■■□□ 2.72
CPSF6-205ENST00000550075 CERS5Q8N5B7 392 aa32.06■■■□□ 2.72
CPSF6-205ENST00000550075 CHAF1AQ13111 956 aaPredicted RBP32.05■■■□□ 2.72
CPSF6-205ENST00000550075 DCPSQ96C86 337 aaKnown RBP32.05■■■□□ 2.72
CPSF6-205ENST00000550075 NOP58Q9Y2X3 529 aaKnown RBP32.05■■■□□ 2.72
CPSF6-205ENST00000550075 A0A1B0GUL7 405 aa32.04■■■□□ 2.72
CPSF6-205ENST00000550075 CDC37L1Q7L3B6 337 aa32.04■■■□□ 2.72
CPSF6-205ENST00000550075 GGA3Q9NZ52 723 aa32.03■■■□□ 2.72
CPSF6-205ENST00000550075 TRPM7Q96QT4 1865 aa32.02■■■□□ 2.72
CPSF6-205ENST00000550075 SEMA3EO15041 775 aa32.01■■■□□ 2.71
CPSF6-205ENST00000550075 SCARF1Q14162 830 aa32.01■■■□□ 2.71
CPSF6-205ENST00000550075 HSP90AB4PQ58FF6 505 aa32.01■■■□□ 2.71
CPSF6-205ENST00000550075 ERC1Q8IUD2 1116 aa32.01■■■□□ 2.71
CPSF6-205ENST00000550075 GLIS2Q9BZE0 524 aaPredicted RBP32.01■■■□□ 2.71
CPSF6-205ENST00000550075 GPR108Q9NPR9 543 aa32.01■■■□□ 2.71
CPSF6-205ENST00000550075 F8W031 263 aaPredicted RBP32■■■□□ 2.71
CPSF6-205ENST00000550075 TIMM10P62072 90 aa32■■■□□ 2.71
CPSF6-205ENST00000550075 KRT26Q7Z3Y9 468 aa32■■■□□ 2.71
CPSF6-205ENST00000550075 SULF1Q8IWU6 871 aa32■■■□□ 2.71
CPSF6-205ENST00000550075 WDR66Q8TBY9 1149 aa32■■■□□ 2.71
CPSF6-205ENST00000550075 NEUROD6Q96NK8 337 aa32■■■□□ 2.71
CPSF6-205ENST00000550075 CREBZFQ9NS37 354 aa32■■■□□ 2.71
CPSF6-205ENST00000550075 PITPNM2Q9BZ72 1349 aa32■■■□□ 2.71
CPSF6-205ENST00000550075 ADORA1P30542 326 aa31.99■■■□□ 2.71
CPSF6-205ENST00000550075 DLGAP5Q15398 846 aa31.99■■■□□ 2.71
CPSF6-205ENST00000550075 GORABQ5T7V8 394 aa31.99■■■□□ 2.71
CPSF6-205ENST00000550075 XAGE2Q96GT9 111 aa31.99■■■□□ 2.71
CPSF6-205ENST00000550075 TMEM88BA6NKF7 163 aa31.98■■■□□ 2.71
CPSF6-205ENST00000550075 PHKA1P46020 1223 aa31.98■■■□□ 2.71
CPSF6-205ENST00000550075 CCDC102BQ68D86 513 aa31.98■■■□□ 2.71
CPSF6-205ENST00000550075 DENND2AQ9ULE3 1009 aa31.98■■■□□ 2.71
CPSF6-205ENST00000550075 WNT10BO00744 389 aa31.97■■■□□ 2.71
CPSF6-205ENST00000550075 ZBTB22O15209 634 aa31.97■■■□□ 2.71
CPSF6-205ENST00000550075 ANGEL2Q5VTE6 544 aaKnown RBP31.97■■■□□ 2.71
CPSF6-205ENST00000550075 TTF2Q9UNY4 1162 aaKnown RBP31.97■■■□□ 2.71
CPSF6-205ENST00000550075 SUGT1Q9Y2Z0 365 aa31.97■■■□□ 2.71
CPSF6-205ENST00000550075 MAST3O60307 1309 aa31.97■■■□□ 2.71
CPSF6-205ENST00000550075 POLR2AP24928 1970 aaKnown RBP31.96■■■□□ 2.71
CPSF6-205ENST00000550075 TRAF5O00463 557 aa31.96■■■□□ 2.71
CPSF6-205ENST00000550075 MTMR14Q8NCE2 650 aa31.96■■■□□ 2.71
CPSF6-205ENST00000550075 ECM29Q5VYK3 1845 aa31.96■■■□□ 2.71
CPSF6-205ENST00000550075 NBPF9Q3BBW0 867 aa31.95■■■□□ 2.71
CPSF6-205ENST00000550075 TNNI3KQ59H18 835 aa31.95■■■□□ 2.71
CPSF6-205ENST00000550075 USP48Q86UV5 1035 aa31.95■■■□□ 2.71
CPSF6-205ENST00000550075 EXOC6BQ9Y2D4 811 aa31.95■■■□□ 2.71
CPSF6-205ENST00000550075 FPGT-TNNI3KV9GXZ4 949 aa31.95■■■□□ 2.71
CPSF6-205ENST00000550075 COL1A1P02452 1464 aaPredicted RBP31.95■■■□□ 2.7
CPSF6-205ENST00000550075 CFAP100Q494V2 611 aa31.94■■■□□ 2.7
CPSF6-205ENST00000550075 SERPINA10Q9UK55 444 aa31.94■■■□□ 2.7
CPSF6-205ENST00000550075 ASTN2O75129 1339 aaPredicted RBP31.94■■■□□ 2.7
CPSF6-205ENST00000550075 PDS5AQ29RF7 1337 aaKnown RBP31.94■■■□□ 2.7
CPSF6-205ENST00000550075 MYO1BO43795 1136 aa31.93■■■□□ 2.7
CPSF6-205ENST00000550075 RBM5P52756 815 aaKnown RBP eCLIP31.93■■■□□ 2.7
CPSF6-205ENST00000550075 HTRA3P83110 453 aa31.93■■■□□ 2.7
CPSF6-205ENST00000550075 ZBED3Q96IU2 234 aaPredicted RBP31.93■■■□□ 2.7
CPSF6-205ENST00000550075 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP31.93■■■□□ 2.7
CPSF6-205ENST00000550075 APOBEC3FQ8IUX4 373 aaKnown RBP31.92■■■□□ 2.7
CPSF6-205ENST00000550075 ZGPATQ8N5A5 531 aaKnown RBP31.92■■■□□ 2.7
CPSF6-205ENST00000550075 SPDYE2BA6NHP3 402 aa31.91■■■□□ 2.7
CPSF6-205ENST00000550075 ADM5C9JUS6 153 aa31.91■■■□□ 2.7
CPSF6-205ENST00000550075 SPDYE6P0CI01 402 aa31.91■■■□□ 2.7
CPSF6-205ENST00000550075 HDLBPQ00341 1268 aaKnown RBP31.91■■■□□ 2.7
CPSF6-205ENST00000550075 SIRT2Q8IXJ6 389 aa31.91■■■□□ 2.7
CPSF6-205ENST00000550075 SALL1Q9NSC2 1324 aa31.91■■■□□ 2.7
CPSF6-205ENST00000550075 CELF2O95319 508 aaKnown RBP31.9■■■□□ 2.7
CPSF6-205ENST00000550075 UQCRFS1P1P0C7P4 283 aa31.9■■■□□ 2.7
CPSF6-205ENST00000550075 RASGRF1Q13972 1273 aa31.9■■■□□ 2.7
CPSF6-205ENST00000550075 CEP350Q5VT06 3117 aa31.89■■■□□ 2.7
CPSF6-205ENST00000550075 FMR1Q06787 632 aaKnown RBP eCLIP31.89■■■□□ 2.7
CPSF6-205ENST00000550075 ZNF408Q9H9D4 720 aa31.89■■■□□ 2.7
CPSF6-205ENST00000550075 CCDC158Q5M9N0 1113 aa31.88■■■□□ 2.69
CPSF6-205ENST00000550075 TEKT1Q969V4 418 aa31.88■■■□□ 2.69
CPSF6-205ENST00000550075 KIF1BPQ96EK5 621 aa31.88■■■□□ 2.69
CPSF6-205ENST00000550075 ABT1Q9ULW3 272 aaKnown RBP31.88■■■□□ 2.69
CPSF6-205ENST00000550075 RAB11FIP3O75154 756 aa31.87■■■□□ 2.69
CPSF6-205ENST00000550075 ARID4AP29374 1257 aaPredicted RBP31.87■■■□□ 2.69
CPSF6-205ENST00000550075 CRKP46108 304 aa31.87■■■□□ 2.69
CPSF6-205ENST00000550075 LDHBP07195 334 aaKnown RBP31.86■■■□□ 2.69
CPSF6-205ENST00000550075 GRIK5Q16478 980 aa31.86■■■□□ 2.69
CPSF6-205ENST00000550075 TTC39AQ5SRH9 613 aa31.86■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms