RNA–Protein interactions for RNA: ENST00000549613.1

CALCOCO1-214, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 884 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-214ENST00000549613 TMED8Q6PL24 325 aaPredicted RBP16.43■□□□□ 0.22
CALCOCO1-214ENST00000549613 IL17RAQ96F46 866 aa16.43■□□□□ 0.22
CALCOCO1-214ENST00000549613 U3KPZ7 1027 aaPredicted RBP16.43■□□□□ 0.22
CALCOCO1-214ENST00000549613 WTIPA6NIX2 430 aaPredicted RBP16.42■□□□□ 0.22
CALCOCO1-214ENST00000549613 POLD1P28340 1107 aa16.42■□□□□ 0.22
CALCOCO1-214ENST00000549613 PTH1RQ03431 593 aa16.42■□□□□ 0.22
CALCOCO1-214ENST00000549613 MPNDQ8N594 471 aa16.42■□□□□ 0.22
CALCOCO1-214ENST00000549613 TBC1D16Q8TBP0 767 aa16.42■□□□□ 0.22
CALCOCO1-214ENST00000549613 PDGFDQ9GZP0 370 aaPredicted RBP16.42■□□□□ 0.22
CALCOCO1-214ENST00000549613 MTFR1LQ9H019 292 aa16.42■□□□□ 0.22
CALCOCO1-214ENST00000549613 LRP2BPQ9P2M1 347 aa16.42■□□□□ 0.22
CALCOCO1-214ENST00000549613 IRS2Q9Y4H2 1338 aa16.42■□□□□ 0.22
CALCOCO1-214ENST00000549613 C6orf229H3BNL8 230 aa16.41■□□□□ 0.22
CALCOCO1-214ENST00000549613 PDE6AP16499 860 aa16.41■□□□□ 0.22
CALCOCO1-214ENST00000549613 ZKSCAN1P17029 563 aaPredicted RBP16.41■□□□□ 0.22
CALCOCO1-214ENST00000549613 CC2D2BQ6DHV5 1058 aa16.41■□□□□ 0.22
CALCOCO1-214ENST00000549613 HSCBQ8IWL3 235 aa16.41■□□□□ 0.22
CALCOCO1-214ENST00000549613 ZGPATQ8N5A5 531 aaKnown RBP16.41■□□□□ 0.22
CALCOCO1-214ENST00000549613 TDRD7Q8NHU6 1098 aaKnown RBP16.41■□□□□ 0.22
CALCOCO1-214ENST00000549613 KCNB2Q92953 911 aa16.41■□□□□ 0.22
CALCOCO1-214ENST00000549613 SEC62Q99442 399 aaKnown RBP16.41■□□□□ 0.22
CALCOCO1-214ENST00000549613 DSCC1Q9BVC3 393 aa16.41■□□□□ 0.22
CALCOCO1-214ENST00000549613 RBM8AQ9Y5S9 174 aaKnown RBP16.41■□□□□ 0.22
CALCOCO1-214ENST00000549613 ST18O60284 1047 aa16.4■□□□□ 0.22
CALCOCO1-214ENST00000549613 KLRK1P26718 216 aa16.4■□□□□ 0.22
CALCOCO1-214ENST00000549613 NECTIN1Q15223 517 aa16.4■□□□□ 0.22
CALCOCO1-214ENST00000549613 GRIPAP1Q4V328 841 aa16.4■□□□□ 0.22
CALCOCO1-214ENST00000549613 SPTY2D1Q68D10 685 aaPredicted RBP16.4■□□□□ 0.22
CALCOCO1-214ENST00000549613 ZNF589Q86UQ0 364 aaPredicted RBP16.4■□□□□ 0.22
CALCOCO1-214ENST00000549613 WDR66Q8TBY9 1149 aa16.4■□□□□ 0.22
CALCOCO1-214ENST00000549613 OSBP2Q969R2 916 aa16.4■□□□□ 0.22
CALCOCO1-214ENST00000549613 EYA3Q99504 573 aa16.4■□□□□ 0.22
CALCOCO1-214ENST00000549613 IQSEC3Q9UPP2 1182 aaPredicted RBP16.4■□□□□ 0.22
CALCOCO1-214ENST00000549613 MAST3O60307 1309 aa16.4■□□□□ 0.22
CALCOCO1-214ENST00000549613 MYH7P12883 1935 aa16.39■□□□□ 0.21
CALCOCO1-214ENST00000549613 C10orf71Q711Q0 1435 aa16.39■□□□□ 0.21
CALCOCO1-214ENST00000549613 PRPF40BQ6NWY9 871 aaKnown RBP16.39■□□□□ 0.21
CALCOCO1-214ENST00000549613 DPP8Q6V1X1 898 aaPredicted RBP16.39■□□□□ 0.21
CALCOCO1-214ENST00000549613 CCDC129Q6ZRS4 1044 aa16.39■□□□□ 0.21
CALCOCO1-214ENST00000549613 ERICH6Q7L0X2 663 aa16.39■□□□□ 0.21
CALCOCO1-214ENST00000549613 TXNRD3Q86VQ6 643 aa16.39■□□□□ 0.21
CALCOCO1-214ENST00000549613 MAGEB6Q8N7X4 407 aa16.39■□□□□ 0.21
CALCOCO1-214ENST00000549613 ZC3H12CQ9C0D7 883 aaKnown RBP16.39■□□□□ 0.21
CALCOCO1-214ENST00000549613 RAI14Q9P0K7 980 aa16.39■□□□□ 0.21
CALCOCO1-214ENST00000549613 ABCF2Q9UG63 623 aa16.39■□□□□ 0.21
CALCOCO1-214ENST00000549613 POLLQ9UGP5 575 aa16.39■□□□□ 0.21
CALCOCO1-214ENST00000549613 CTNNA3Q9UI47 895 aa16.39■□□□□ 0.21
CALCOCO1-214ENST00000549613 ZNF532Q9HCE3 1301 aa16.39■□□□□ 0.21
CALCOCO1-214ENST00000549613 LRRC37AA6NMS7 1700 aa16.39■□□□□ 0.21
CALCOCO1-214ENST00000549613 M0R2C6 588 aa16.38■□□□□ 0.21
CALCOCO1-214ENST00000549613 CHGBP05060 677 aa16.38■□□□□ 0.21
CALCOCO1-214ENST00000549613 IL1R1P14778 569 aa16.38■□□□□ 0.21
CALCOCO1-214ENST00000549613 CHRNA5P30532 468 aa16.38■□□□□ 0.21
CALCOCO1-214ENST00000549613 CREB3L3Q68CJ9 461 aa16.38■□□□□ 0.21
CALCOCO1-214ENST00000549613 TBC1D2Q9BYX2 928 aa16.38■□□□□ 0.21
CALCOCO1-214ENST00000549613 CD209Q9NNX6 404 aa16.38■□□□□ 0.21
CALCOCO1-214ENST00000549613 WWC3Q9ULE0 1092 aa16.38■□□□□ 0.21
CALCOCO1-214ENST00000549613 PALD1Q9ULE6 856 aa16.38■□□□□ 0.21
CALCOCO1-214ENST00000549613 SNX14Q9Y5W7 946 aa16.38■□□□□ 0.21
CALCOCO1-214ENST00000549613 SALL1Q9NSC2 1324 aa16.38■□□□□ 0.21
CALCOCO1-214ENST00000549613 TCRBV5S4A2TA0A5A2 114 aa16.37■□□□□ 0.21
CALCOCO1-214ENST00000549613 ZBTB7AO95365 584 aa16.37■□□□□ 0.21
CALCOCO1-214ENST00000549613 PSMA5P28066 241 aa16.37■□□□□ 0.21
CALCOCO1-214ENST00000549613 MCM2P49736 904 aa16.37■□□□□ 0.21
CALCOCO1-214ENST00000549613 TGFB2P61812 414 aa16.37■□□□□ 0.21
CALCOCO1-214ENST00000549613 CHAF1AQ13111 956 aaPredicted RBP16.37■□□□□ 0.21
CALCOCO1-214ENST00000549613 KRT32Q14532 448 aa16.37■□□□□ 0.21
CALCOCO1-214ENST00000549613 AIDAQ96BJ3 306 aa16.37■□□□□ 0.21
CALCOCO1-214ENST00000549613 TM6SF1Q9BZW5 370 aa16.37■□□□□ 0.21
CALCOCO1-214ENST00000549613 COA1Q9GZY4 146 aa16.37■□□□□ 0.21
CALCOCO1-214ENST00000549613 PUS7LQ9H0K6 701 aaKnown RBP16.37■□□□□ 0.21
CALCOCO1-214ENST00000549613 COL11A2P13942 1736 aaPredicted RBP16.36■□□□□ 0.21
CALCOCO1-214ENST00000549613 SLC27A2O14975 620 aa16.36■□□□□ 0.21
CALCOCO1-214ENST00000549613 GPAA1O43292 621 aa16.36■□□□□ 0.21
CALCOCO1-214ENST00000549613 HSPD1P10809 573 aaKnown RBP16.36■□□□□ 0.21
CALCOCO1-214ENST00000549613 CYP7A1P22680 504 aa16.36■□□□□ 0.21
CALCOCO1-214ENST00000549613 TSGA10IPQ3SY00 556 aa16.36■□□□□ 0.21
CALCOCO1-214ENST00000549613 SLFNL1Q499Z3 407 aa16.36■□□□□ 0.21
CALCOCO1-214ENST00000549613 TTLL6Q8N841 843 aa16.36■□□□□ 0.21
CALCOCO1-214ENST00000549613 SUPT20HQ8NEM7 779 aa16.36■□□□□ 0.21
CALCOCO1-214ENST00000549613 ATF5Q9Y2D1 282 aaPredicted RBP16.36■□□□□ 0.21
CALCOCO1-214ENST00000549613 DOCK2Q92608 1830 aa16.35■□□□□ 0.21
CALCOCO1-214ENST00000549613 G3V3G9 751 aa16.35■□□□□ 0.21
CALCOCO1-214ENST00000549613 GNAT2P19087 354 aa16.35■□□□□ 0.21
CALCOCO1-214ENST00000549613 NEK4P51957 841 aa16.35■□□□□ 0.21
CALCOCO1-214ENST00000549613 DCAF8Q5TAQ9 597 aa16.35■□□□□ 0.21
CALCOCO1-214ENST00000549613 NAA16Q6N069 864 aaPredicted RBP16.35■□□□□ 0.21
CALCOCO1-214ENST00000549613 RASEFQ8IZ41 740 aa16.35■□□□□ 0.21
CALCOCO1-214ENST00000549613 TBC1D22AQ8WUA7 517 aa16.34■□□□□ 0.21
CALCOCO1-214ENST00000549613 GPR101Q96P66 508 aaPredicted RBP16.34■□□□□ 0.21
CALCOCO1-214ENST00000549613 STRBPQ96SI9 672 aaKnown RBP16.34■□□□□ 0.21
CALCOCO1-214ENST00000549613 RPAP1Q9BWH6 1393 aaPredicted RBP16.34■□□□□ 0.21
CALCOCO1-214ENST00000549613 COL1A1P02452 1464 aaPredicted RBP16.34■□□□□ 0.21
CALCOCO1-214ENST00000549613 MYH13Q9UKX3 1938 aa16.33■□□□□ 0.21
CALCOCO1-214ENST00000549613 K7ELQ4 463 aaPredicted RBP16.33■□□□□ 0.2
CALCOCO1-214ENST00000549613 RIMBP2O15034 1052 aa16.33■□□□□ 0.2
CALCOCO1-214ENST00000549613 LDHBP07195 334 aaKnown RBP16.33■□□□□ 0.2
CALCOCO1-214ENST00000549613 LDHCP07864 332 aa16.33■□□□□ 0.2
CALCOCO1-214ENST00000549613 SLC4A3P48751 1232 aa16.33■□□□□ 0.2
CALCOCO1-214ENST00000549613 GSTO1P78417 241 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms