RNA–Protein interactions for RNA: ENST00000546026.1

CIT-218, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 3

Gene CIT, Length 677 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-218ENST00000546026 DOCK2Q92608 1830 aa12.19□□□□□ -0.46
CIT-218ENST00000546026 IDH1O75874 414 aaKnown RBP12.19□□□□□ -0.46
CIT-218ENST00000546026 CHGBP05060 677 aa12.19□□□□□ -0.46
CIT-218ENST00000546026 PDE6AP16499 860 aa12.19□□□□□ -0.46
CIT-218ENST00000546026 ZKSCAN1P17029 563 aaPredicted RBP12.19□□□□□ -0.46
CIT-218ENST00000546026 TSGA10IPQ3SY00 556 aa12.19□□□□□ -0.46
CIT-218ENST00000546026 CCDC129Q6ZRS4 1044 aa12.19□□□□□ -0.46
CIT-218ENST00000546026 ZNF804AQ7Z570 1209 aa12.19□□□□□ -0.46
CIT-218ENST00000546026 TM6SF1Q9BZW5 370 aa12.19□□□□□ -0.46
CIT-218ENST00000546026 TMX4Q9H1E5 349 aaPredicted RBP12.19□□□□□ -0.46
CIT-218ENST00000546026 NSFL1CQ9UNZ2 370 aaKnown RBP12.19□□□□□ -0.46
CIT-218ENST00000546026 TCRBV5S4A2TA0A5A2 114 aa12.18□□□□□ -0.46
CIT-218ENST00000546026 M0R2C6 588 aa12.18□□□□□ -0.46
CIT-218ENST00000546026 SLC27A2O14975 620 aa12.18□□□□□ -0.46
CIT-218ENST00000546026 FRAT2O75474 233 aaPredicted RBP12.18□□□□□ -0.46
CIT-218ENST00000546026 UFL1O94874 794 aa12.18□□□□□ -0.46
CIT-218ENST00000546026 KLRK1P26718 216 aa12.18□□□□□ -0.46
CIT-218ENST00000546026 SLC4A3P48751 1232 aa12.18□□□□□ -0.46
CIT-218ENST00000546026 MCM2P49736 904 aa12.18□□□□□ -0.46
CIT-218ENST00000546026 CREB3L3Q68CJ9 461 aa12.18□□□□□ -0.46
CIT-218ENST00000546026 PRPF40BQ6NWY9 871 aaKnown RBP12.18□□□□□ -0.46
CIT-218ENST00000546026 RASEFQ8IZ41 740 aa12.18□□□□□ -0.46
CIT-218ENST00000546026 TDRD7Q8NHU6 1098 aaKnown RBP12.18□□□□□ -0.46
CIT-218ENST00000546026 TBC1D16Q8TBP0 767 aa12.18□□□□□ -0.46
CIT-218ENST00000546026 CNKSR1Q969H4 720 aa12.18□□□□□ -0.46
CIT-218ENST00000546026 LRP2BPQ9P2M1 347 aa12.18□□□□□ -0.46
CIT-218ENST00000546026 ZNF532Q9HCE3 1301 aa12.17□□□□□ -0.46
CIT-218ENST00000546026 K7ELQ4 463 aaPredicted RBP12.17□□□□□ -0.46
CIT-218ENST00000546026 HSPD1P10809 573 aaKnown RBP12.17□□□□□ -0.46
CIT-218ENST00000546026 NEK4P51957 841 aa12.17□□□□□ -0.46
CIT-218ENST00000546026 KRT32Q14532 448 aa12.17□□□□□ -0.46
CIT-218ENST00000546026 SLFNL1Q499Z3 407 aa12.17□□□□□ -0.46
CIT-218ENST00000546026 SPTY2D1Q68D10 685 aaPredicted RBP12.17□□□□□ -0.46
CIT-218ENST00000546026 TXNRD3Q86VQ6 643 aa12.17□□□□□ -0.46
CIT-218ENST00000546026 ZGPATQ8N5A5 531 aaKnown RBP12.17□□□□□ -0.46
CIT-218ENST00000546026 ZNF622Q969S3 477 aaKnown RBP eCLIP12.17□□□□□ -0.462e-6■■■□□ 14.7
CIT-218ENST00000546026 PDGFDQ9GZP0 370 aaPredicted RBP12.17□□□□□ -0.46
CIT-218ENST00000546026 PUS7LQ9H0K6 701 aaKnown RBP12.17□□□□□ -0.46
CIT-218ENST00000546026 CTNNA3Q9UI47 895 aa12.17□□□□□ -0.46
CIT-218ENST00000546026 WWC3Q9ULE0 1092 aa12.17□□□□□ -0.46
CIT-218ENST00000546026 IQSEC3Q9UPP2 1182 aaPredicted RBP12.17□□□□□ -0.46
CIT-218ENST00000546026 COL11A2P13942 1736 aaPredicted RBP12.17□□□□□ -0.46
CIT-218ENST00000546026 SALL1Q9NSC2 1324 aa12.16□□□□□ -0.46
CIT-218ENST00000546026 GPAA1O43292 621 aa12.16□□□□□ -0.46
CIT-218ENST00000546026 IL1R1P14778 569 aa12.16□□□□□ -0.46
CIT-218ENST00000546026 PSMA5P28066 241 aa12.16□□□□□ -0.46
CIT-218ENST00000546026 CC2D2BQ6DHV5 1058 aa12.16□□□□□ -0.46
CIT-218ENST00000546026 ERICH6Q7L0X2 663 aa12.16□□□□□ -0.46
CIT-218ENST00000546026 MPNDQ8N594 471 aa12.16□□□□□ -0.46
CIT-218ENST00000546026 MAGEB6Q8N7X4 407 aa12.16□□□□□ -0.46
CIT-218ENST00000546026 WDR66Q8TBY9 1149 aa12.16□□□□□ -0.46
CIT-218ENST00000546026 UPF1Q92900 1129 aaKnown RBP eCLIP12.16□□□□□ -0.46
CIT-218ENST00000546026 ZSWIM6Q9HCJ5 1215 aa12.16□□□□□ -0.46
CIT-218ENST00000546026 POLLQ9UGP5 575 aa12.16□□□□□ -0.46
CIT-218ENST00000546026 C10orf71Q711Q0 1435 aa12.16□□□□□ -0.46
CIT-218ENST00000546026 LTBP1Q14766 1721 aa12.16□□□□□ -0.46
CIT-218ENST00000546026 COL1A1P02452 1464 aaPredicted RBP12.15□□□□□ -0.46
CIT-218ENST00000546026 MYO5AQ9Y4I1 1855 aaKnown RBP12.15□□□□□ -0.46
CIT-218ENST00000546026 C6orf229H3BNL8 230 aa12.15□□□□□ -0.46
CIT-218ENST00000546026 GRIPAP1Q4V328 841 aa12.15□□□□□ -0.46
CIT-218ENST00000546026 STRBPQ96SI9 672 aaKnown RBP12.15□□□□□ -0.46
CIT-218ENST00000546026 CD209Q9NNX6 404 aa12.15□□□□□ -0.46
CIT-218ENST00000546026 RAI14Q9P0K7 980 aa12.15□□□□□ -0.46
CIT-218ENST00000546026 ABCF2Q9UG63 623 aa12.15□□□□□ -0.46
CIT-218ENST00000546026 RPAP1Q9BWH6 1393 aaPredicted RBP12.15□□□□□ -0.46
CIT-218ENST00000546026 MYH13Q9UKX3 1938 aa12.14□□□□□ -0.47
CIT-218ENST00000546026 CD2BP2O95400 341 aaKnown RBP12.14□□□□□ -0.47
CIT-218ENST00000546026 GNAT2P19087 354 aa12.14□□□□□ -0.47
CIT-218ENST00000546026 CYP7A1P22680 504 aa12.14□□□□□ -0.47
CIT-218ENST00000546026 ALX1Q15699 326 aa12.14□□□□□ -0.47
CIT-218ENST00000546026 VPS53Q5VIR6 699 aa12.14□□□□□ -0.47
CIT-218ENST00000546026 DPP8Q6V1X1 898 aaPredicted RBP12.14□□□□□ -0.47
CIT-218ENST00000546026 AIDAQ96BJ3 306 aa12.14□□□□□ -0.47
CIT-218ENST00000546026 EYA3Q99504 573 aa12.14□□□□□ -0.47
CIT-218ENST00000546026 COA1Q9GZY4 146 aa12.14□□□□□ -0.47
CIT-218ENST00000546026 MTFR1LQ9H019 292 aa12.14□□□□□ -0.47
CIT-218ENST00000546026 ALDH8A1Q9H2A2 487 aaPredicted RBP12.14□□□□□ -0.47
CIT-218ENST00000546026 CYP46A1Q9Y6A2 500 aa12.14□□□□□ -0.47
CIT-218ENST00000546026 PATL2C9JE40 543 aaKnown RBP12.13□□□□□ -0.47
CIT-218ENST00000546026 CYP21A2P08686 494 aa12.13□□□□□ -0.47
CIT-218ENST00000546026 CASTP20810 708 aaKnown RBP12.13□□□□□ -0.47
CIT-218ENST00000546026 POLD1P28340 1107 aa12.13□□□□□ -0.47
CIT-218ENST00000546026 CHRNA5P30532 468 aa12.13□□□□□ -0.47
CIT-218ENST00000546026 CHAF1AQ13111 956 aaPredicted RBP12.13□□□□□ -0.47
CIT-218ENST00000546026 NAA16Q6N069 864 aaPredicted RBP12.13□□□□□ -0.47
CIT-218ENST00000546026 RUFY3Q7L099 469 aa12.13□□□□□ -0.47
CIT-218ENST00000546026 SLC51AQ86UW1 340 aa12.13□□□□□ -0.47
CIT-218ENST00000546026 C7orf43Q8WVR3 580 aa12.13□□□□□ -0.47
CIT-218ENST00000546026 JAKMIP1Q96N16 626 aaKnown RBP12.13□□□□□ -0.47
CIT-218ENST00000546026 TTC14Q96N46 770 aa12.13□□□□□ -0.47
CIT-218ENST00000546026 ZC3H12CQ9C0D7 883 aaKnown RBP12.13□□□□□ -0.47
CIT-218ENST00000546026 DUOX1Q9NRD9 1551 aa12.13□□□□□ -0.47
CIT-218ENST00000546026 ZMYM6O95789 1325 aa12.12□□□□□ -0.47
CIT-218ENST00000546026 FOXP2O15409 715 aa12.12□□□□□ -0.47
CIT-218ENST00000546026 FGAP02671 866 aa12.12□□□□□ -0.47
CIT-218ENST00000546026 HMGB1P09429 215 aaKnown RBP12.12□□□□□ -0.47
CIT-218ENST00000546026 TGFB2P61812 414 aa12.12□□□□□ -0.47
CIT-218ENST00000546026 IMMTQ16891 758 aaKnown RBP12.12□□□□□ -0.47
CIT-218ENST00000546026 ADCK5Q3MIX3 580 aa12.12□□□□□ -0.47
CIT-218ENST00000546026 TBC1D22AQ8WUA7 517 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 192.2 ms