RNA–Protein interactions for RNA: ENST00000545026.1

LEMD3-206, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-206ENST00000545026 VN1R5Q7Z5H4 357 aa10.05□□□□□ -0.8
LEMD3-206ENST00000545026 GOLGA6L1Q8N7Z2 621 aa10.05□□□□□ -0.8
LEMD3-206ENST00000545026 SRSF11Q05519 484 aaKnown RBP10.04□□□□□ -0.8
LEMD3-206ENST00000545026 PWP1Q13610 501 aa10.04□□□□□ -0.8
LEMD3-206ENST00000545026 RELL1Q8IUW5 271 aa10.04□□□□□ -0.8
LEMD3-206ENST00000545026 DRC1Q96MC2 740 aa10.04□□□□□ -0.8
LEMD3-206ENST00000545026 TMEM74Q96NL1 305 aa10.04□□□□□ -0.8
LEMD3-206ENST00000545026 CLEC4MQ9H2X3 399 aaPredicted RBP10.04□□□□□ -0.8
LEMD3-206ENST00000545026 GDF2Q9UK05 429 aaPredicted RBP10.04□□□□□ -0.8
LEMD3-206ENST00000545026 STARD13Q9Y3M8 1113 aa10.04□□□□□ -0.8
LEMD3-206ENST00000545026 F6X3S4 739 aa10.03□□□□□ -0.8
LEMD3-206ENST00000545026 RLBP1P12271 317 aa10.03□□□□□ -0.8
LEMD3-206ENST00000545026 MAP3K11Q16584 847 aa10.03□□□□□ -0.8
LEMD3-206ENST00000545026 ZNF423Q2M1K9 1284 aa10.03□□□□□ -0.8
LEMD3-206ENST00000545026 LACRTQ9GZZ8 138 aa10.03□□□□□ -0.8
LEMD3-206ENST00000545026 INPP5FQ9Y2H2 1132 aa10.03□□□□□ -0.8
LEMD3-206ENST00000545026 EPXP11678 715 aa10.02□□□□□ -0.81
LEMD3-206ENST00000545026 ALAS2P22557 587 aa10.02□□□□□ -0.81
LEMD3-206ENST00000545026 PCDH1Q08174 1060 aa10.02□□□□□ -0.81
LEMD3-206ENST00000545026 C1orf229Q6ZS94 237 aaPredicted RBP10.02□□□□□ -0.81
LEMD3-206ENST00000545026 PHC3Q8NDX5 983 aa10.02□□□□□ -0.81
LEMD3-206ENST00000545026 SLC16A10Q8TF71 515 aa10.02□□□□□ -0.81
LEMD3-206ENST00000545026 ACDQ96AP0 544 aa10.02□□□□□ -0.81
LEMD3-206ENST00000545026 SH2B1Q9NRF2 756 aaPredicted RBP10.02□□□□□ -0.81
LEMD3-206ENST00000545026 TMEM39AQ9NV64 488 aa10.02□□□□□ -0.81
LEMD3-206ENST00000545026 ADAMTS1Q9UHI8 967 aa10.02□□□□□ -0.81
LEMD3-206ENST00000545026 MINDY4BA8MYZ0 360 aa10.01□□□□□ -0.81
LEMD3-206ENST00000545026 PAGE1O75459 146 aa10.01□□□□□ -0.81
LEMD3-206ENST00000545026 RGS9O75916 674 aaPredicted RBP10.01□□□□□ -0.81
LEMD3-206ENST00000545026 B3GALT4O96024 378 aa10.01□□□□□ -0.81
LEMD3-206ENST00000545026 GBP2P32456 591 aaPredicted RBP10.01□□□□□ -0.81
LEMD3-206ENST00000545026 LIG3P49916 1009 aa10.01□□□□□ -0.81
LEMD3-206ENST00000545026 GNL2Q13823 731 aaKnown RBP10.01□□□□□ -0.81
LEMD3-206ENST00000545026 SF3A1Q15459 793 aaKnown RBP10.01□□□□□ -0.81
LEMD3-206ENST00000545026 GRIK5Q16478 980 aa10.01□□□□□ -0.81
LEMD3-206ENST00000545026 C20orf204Q6ZNR8 217 aa10.01□□□□□ -0.81
LEMD3-206ENST00000545026 NUDT8Q8WV74 236 aa10.01□□□□□ -0.81
LEMD3-206ENST00000545026 GPN3Q9UHW5 284 aaPredicted RBP10.01□□□□□ -0.81
LEMD3-206ENST00000545026 ADAMTS2O95450 1211 aa10□□□□□ -0.81
LEMD3-206ENST00000545026 CDC27P30260 824 aa10□□□□□ -0.81
LEMD3-206ENST00000545026 GJA8P48165 433 aa10□□□□□ -0.81
LEMD3-206ENST00000545026 ZNF157P51786 506 aaPredicted RBP10□□□□□ -0.81
LEMD3-206ENST00000545026 PAK2Q13177 524 aa10□□□□□ -0.81
LEMD3-206ENST00000545026 GDF6Q6KF10 455 aaPredicted RBP10□□□□□ -0.81
LEMD3-206ENST00000545026 IRF7Q92985 503 aa10□□□□□ -0.81
LEMD3-206ENST00000545026 RHOVQ96L33 236 aa10□□□□□ -0.81
LEMD3-206ENST00000545026 GMLQ99445 158 aa10□□□□□ -0.81
LEMD3-206ENST00000545026 TLR6Q9Y2C9 796 aa10□□□□□ -0.81
LEMD3-206ENST00000545026 ESRRAP11474 423 aaPredicted RBP9.99□□□□□ -0.81
LEMD3-206ENST00000545026 EPHA1P21709 976 aa9.99□□□□□ -0.81
LEMD3-206ENST00000545026 EIF4A3P38919 411 aaKnown RBP9.99□□□□□ -0.81
LEMD3-206ENST00000545026 TTBK2Q6IQ55 1244 aa9.99□□□□□ -0.81
LEMD3-206ENST00000545026 AGMOQ6ZNB7 445 aa9.99□□□□□ -0.81
LEMD3-206ENST00000545026 KCNQ5Q9NR82 932 aa9.99□□□□□ -0.81
LEMD3-206ENST00000545026 ALBP02768 609 aa9.98□□□□□ -0.81
LEMD3-206ENST00000545026 PPP2R3AQ06190 1150 aa9.98□□□□□ -0.81
LEMD3-206ENST00000545026 CACTIN-AS1Q8N1I8 211 aa9.98□□□□□ -0.81
LEMD3-206ENST00000545026 SPON2Q9BUD6 331 aa9.98□□□□□ -0.81
LEMD3-206ENST00000545026 GARTP22102 1010 aa9.97□□□□□ -0.81
LEMD3-206ENST00000545026 BAG6P46379 1132 aa9.97□□□□□ -0.81
LEMD3-206ENST00000545026 RPS26P62854 115 aaKnown RBP9.97□□□□□ -0.81
LEMD3-206ENST00000545026 PCNX4Q63HM2 1172 aa9.97□□□□□ -0.81
LEMD3-206ENST00000545026 KIAA0825Q8IV33 1275 aa9.97□□□□□ -0.81
LEMD3-206ENST00000545026 GPRASP2Q96D09 838 aa9.97□□□□□ -0.81
LEMD3-206ENST00000545026 JPH1Q9HDC5 661 aaPredicted RBP9.97□□□□□ -0.81
LEMD3-206ENST00000545026 PRKAG2Q9UGJ0 569 aa9.97□□□□□ -0.81
LEMD3-206ENST00000545026 SOX1O00570 391 aaPredicted RBP9.96□□□□□ -0.82
LEMD3-206ENST00000545026 PF4P02776 101 aa9.96□□□□□ -0.82
LEMD3-206ENST00000545026 TFE3P19532 575 aaPredicted RBP9.96□□□□□ -0.82
LEMD3-206ENST00000545026 BMP6P22004 513 aa9.96□□□□□ -0.82
LEMD3-206ENST00000545026 LMNB2Q03252 620 aa9.96□□□□□ -0.82
LEMD3-206ENST00000545026 IKBKEQ14164 716 aa9.96□□□□□ -0.82
LEMD3-206ENST00000545026 RASIP1Q5U651 963 aa9.96□□□□□ -0.82
LEMD3-206ENST00000545026 KANK3Q6NY19 840 aa9.96□□□□□ -0.82
LEMD3-206ENST00000545026 FBXL19Q6PCT2 694 aa9.96□□□□□ -0.82
LEMD3-206ENST00000545026 RASGRP4Q8TDF6 673 aa9.96□□□□□ -0.82
LEMD3-206ENST00000545026 ZNF296Q8WUU4 475 aaPredicted RBP9.96□□□□□ -0.82
LEMD3-206ENST00000545026 EDARADDQ8WWZ3 215 aa9.96□□□□□ -0.82
LEMD3-206ENST00000545026 TANGO6Q9C0B7 1094 aa9.96□□□□□ -0.82
LEMD3-206ENST00000545026 PPP1R1BQ9UD71 204 aaPredicted RBP9.96□□□□□ -0.82
LEMD3-206ENST00000545026 FAM177BA6PVY3 158 aa9.95□□□□□ -0.82
LEMD3-206ENST00000545026 H3BRJ5 948 aa9.95□□□□□ -0.82
LEMD3-206ENST00000545026 NME2P22392 152 aa9.95□□□□□ -0.82
LEMD3-206ENST00000545026 DNAJA1P31689 397 aaKnown RBP9.95□□□□□ -0.82
LEMD3-206ENST00000545026 AFF1P51825 1210 aaKnown RBP9.95□□□□□ -0.82
LEMD3-206ENST00000545026 CABP4P57796 275 aa9.95□□□□□ -0.82
LEMD3-206ENST00000545026 ARID5AQ03989 594 aa9.95□□□□□ -0.82
LEMD3-206ENST00000545026 FAM160A1Q05DH4 1040 aa9.95□□□□□ -0.82
LEMD3-206ENST00000545026 CAMK2GQ13555 558 aaPredicted RBP9.95□□□□□ -0.82
LEMD3-206ENST00000545026 IL22RA1Q8N6P7 574 aa9.95□□□□□ -0.82
LEMD3-206ENST00000545026 GALNT6Q8NCL4 622 aa9.95□□□□□ -0.82
LEMD3-206ENST00000545026 EAF1Q96JC9 268 aaPredicted RBP9.95□□□□□ -0.82
LEMD3-206ENST00000545026 OIP5O43482 229 aa9.94□□□□□ -0.82
LEMD3-206ENST00000545026 GREM1O60565 184 aa9.94□□□□□ -0.82
LEMD3-206ENST00000545026 SLURP2P0DP57 97 aa9.94□□□□□ -0.82
LEMD3-206ENST00000545026 LCE2CQ5TA81 110 aa9.94□□□□□ -0.82
LEMD3-206ENST00000545026 CHSY3Q70JA7 882 aa9.94□□□□□ -0.82
LEMD3-206ENST00000545026 STK35Q8TDR2 534 aa9.94□□□□□ -0.82
LEMD3-206ENST00000545026 UBXN4Q92575 508 aa9.94□□□□□ -0.82
LEMD3-206ENST00000545026 BTBD6Q96KE9 485 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms